RNA–Protein interactions for RNA: ENST00000220959.8

UBR5-201, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBR5, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-201ENST00000220959 MCM9Q9NXL9 1143 aa16.74■□□□□ 0.27
UBR5-201ENST00000220959 TLDC2A0PJX2 215 aa16.74■□□□□ 0.27
UBR5-201ENST00000220959 PPP1R9BQ96SB3 815 aa16.74■□□□□ 0.27
UBR5-201ENST00000220959 EPSTI1Q96J88 318 aa16.74■□□□□ 0.27
UBR5-201ENST00000220959 CSRNP2Q9H175 543 aa16.74■□□□□ 0.27
UBR5-201ENST00000220959 SYT1P21579 422 aa16.74■□□□□ 0.27
UBR5-201ENST00000220959 ZSCAN23Q3MJ62 389 aa16.74■□□□□ 0.27
UBR5-201ENST00000220959 CAPZA3Q96KX2 299 aa16.74■□□□□ 0.27
UBR5-201ENST00000220959 DHX29Q7Z478 1369 aaKnown RBP16.74■□□□□ 0.27
UBR5-201ENST00000220959 GIPC1O14908 333 aa16.74■□□□□ 0.27
UBR5-201ENST00000220959 KRT222Q8N1A0 295 aa16.74■□□□□ 0.27
UBR5-201ENST00000220959 IFT81Q8WYA0 676 aa16.74■□□□□ 0.27
UBR5-201ENST00000220959 DAPK3O43293 454 aa16.74■□□□□ 0.27
UBR5-201ENST00000220959 RPL13P26373 211 aaKnown RBP16.74■□□□□ 0.27
UBR5-201ENST00000220959 TUBB4BP68371 445 aa16.74■□□□□ 0.27
UBR5-201ENST00000220959 UAP1Q16222 522 aaPredicted RBP16.74■□□□□ 0.27
UBR5-201ENST00000220959 GABPB2Q8TAK5 448 aaPredicted RBP16.74■□□□□ 0.27
UBR5-201ENST00000220959 TSGA10Q9BZW7 698 aa16.74■□□□□ 0.27
UBR5-201ENST00000220959 FAM204AQ9H8W3 233 aa16.74■□□□□ 0.27
UBR5-201ENST00000220959 PPP1R21Q6ZMI0 780 aa16.73■□□□□ 0.27
UBR5-201ENST00000220959 SETDB1Q15047 1291 aa16.73■□□□□ 0.27
UBR5-201ENST00000220959 SEL1L2Q5TEA6 688 aa16.73■□□□□ 0.27
UBR5-201ENST00000220959 TMX3Q96JJ7 454 aa16.73■□□□□ 0.27
UBR5-201ENST00000220959 ERCC6LQ2NKX8 1250 aa16.73■□□□□ 0.27
UBR5-201ENST00000220959 SBNO2Q9Y2G9 1366 aa16.73■□□□□ 0.27
UBR5-201ENST00000220959 FAM135AQ9P2D6 1515 aa16.73■□□□□ 0.27
UBR5-201ENST00000220959 CALCOCO2Q13137 446 aa16.73■□□□□ 0.27
UBR5-201ENST00000220959 TBC1D31Q96DN5 1066 aa16.73■□□□□ 0.27
UBR5-201ENST00000220959 RIMBP2O15034 1052 aa16.73■□□□□ 0.27
UBR5-201ENST00000220959 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.73■□□□□ 0.27
UBR5-201ENST00000220959 GRM8O00222 908 aa16.73■□□□□ 0.27
UBR5-201ENST00000220959 TPTE2Q6XPS3 522 aa16.73■□□□□ 0.27
UBR5-201ENST00000220959 GPHNQ9NQX3 736 aaPredicted RBP16.73■□□□□ 0.27
UBR5-201ENST00000220959 SEPT6Q14141 434 aa16.73■□□□□ 0.27
UBR5-201ENST00000220959 RTCBQ9Y3I0 505 aaKnown RBP16.73■□□□□ 0.27
UBR5-201ENST00000220959 ANXA1P04083 346 aa16.72■□□□□ 0.27
UBR5-201ENST00000220959 IL15P40933 162 aaPredicted RBP16.72■□□□□ 0.27
UBR5-201ENST00000220959 XAGE3Q8WTP9 111 aa16.72■□□□□ 0.27
UBR5-201ENST00000220959 RAPGEF1Q13905 1077 aa16.72■□□□□ 0.27
UBR5-201ENST00000220959 WWC3Q9ULE0 1092 aa16.72■□□□□ 0.27
UBR5-201ENST00000220959 KRT9P35527 623 aa16.72■□□□□ 0.27
UBR5-201ENST00000220959 CCDC184Q52MB2 194 aa16.72■□□□□ 0.27
UBR5-201ENST00000220959 CHPF2Q9P2E5 772 aa16.72■□□□□ 0.27
UBR5-201ENST00000220959 EPB41P11171 864 aaKnown RBP16.72■□□□□ 0.27
UBR5-201ENST00000220959 NBPF14Q5TI25 921 aa16.72■□□□□ 0.27
UBR5-201ENST00000220959 COPS6Q7L5N1 327 aa16.72■□□□□ 0.27
UBR5-201ENST00000220959 MAGEB6Q8N7X4 407 aa16.72■□□□□ 0.27
UBR5-201ENST00000220959 TTC36A6NLP5 189 aa16.72■□□□□ 0.27
UBR5-201ENST00000220959 C20orf194Q5TEA3 1177 aa16.72■□□□□ 0.27
UBR5-201ENST00000220959 GPR161Q8N6U8 529 aaKnown RBP16.72■□□□□ 0.27
UBR5-201ENST00000220959 EYA3Q99504 573 aa16.72■□□□□ 0.27
UBR5-201ENST00000220959 NSFL1CQ9UNZ2 370 aaKnown RBP16.72■□□□□ 0.27
UBR5-201ENST00000220959 TACC3Q9Y6A5 838 aa16.72■□□□□ 0.27
UBR5-201ENST00000220959 RTL1A6NKG5 1358 aa16.72■□□□□ 0.27
UBR5-201ENST00000220959 ERCC5P28715 1186 aaPredicted RBP16.72■□□□□ 0.27
UBR5-201ENST00000220959 VAV2P52735 878 aa16.72■□□□□ 0.27
UBR5-201ENST00000220959 CEP128Q6ZU80 1094 aa16.72■□□□□ 0.27
UBR5-201ENST00000220959 BRDTQ58F21 947 aaPredicted RBP16.71■□□□□ 0.27
UBR5-201ENST00000220959 CNPY2Q9Y2B0 182 aa16.71■□□□□ 0.27
UBR5-201ENST00000220959 GUCA1BQ9UMX6 200 aa16.71■□□□□ 0.27
UBR5-201ENST00000220959 ZEB2O60315 1214 aa16.71■□□□□ 0.27
UBR5-201ENST00000220959 HARSP12081 509 aaKnown RBP16.71■□□□□ 0.27
UBR5-201ENST00000220959 GABPAQ06546 454 aa16.71■□□□□ 0.27
UBR5-201ENST00000220959 CUL4BQ13620 913 aa16.71■□□□□ 0.27
UBR5-201ENST00000220959 KMT5BQ4FZB7 885 aa16.71■□□□□ 0.27
UBR5-201ENST00000220959 MICALL1Q8N3F8 863 aa16.71■□□□□ 0.27
UBR5-201ENST00000220959 LEO1Q8WVC0 666 aaPredicted RBP16.71■□□□□ 0.27
UBR5-201ENST00000220959 EFCAB5A4FU69 1503 aa16.71■□□□□ 0.27
UBR5-201ENST00000220959 SPTLC2O15270 562 aa16.71■□□□□ 0.27
UBR5-201ENST00000220959 LDHBP07195 334 aaKnown RBP16.71■□□□□ 0.27
UBR5-201ENST00000220959 CCDC26Q8TAB7 109 aa16.71■□□□□ 0.27
UBR5-201ENST00000220959 UBLCP1Q8WVY7 318 aaPredicted RBP16.71■□□□□ 0.27
UBR5-201ENST00000220959 SAMD15Q9P1V8 674 aa16.71■□□□□ 0.27
UBR5-201ENST00000220959 ATP5DP30049 168 aa16.71■□□□□ 0.26
UBR5-201ENST00000220959 BIRC3Q13489 604 aa16.71■□□□□ 0.26
UBR5-201ENST00000220959 CLUL1Q15846 466 aa16.71■□□□□ 0.26
UBR5-201ENST00000220959 TFCP2L1Q9NZI6 479 aa16.71■□□□□ 0.26
UBR5-201ENST00000220959 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.7■□□□□ 0.26
UBR5-201ENST00000220959 PAG1Q9NWQ8 432 aa16.7■□□□□ 0.26
UBR5-201ENST00000220959 MSH6P52701 1360 aa16.7■□□□□ 0.26
UBR5-201ENST00000220959 TNNC1P63316 161 aa16.7■□□□□ 0.26
UBR5-201ENST00000220959 GTF2A1P52655 376 aaPredicted RBP16.7■□□□□ 0.26
UBR5-201ENST00000220959 ARFGAP2Q8N6H7 521 aa16.7■□□□□ 0.26
UBR5-201ENST00000220959 NAP1L4Q99733 375 aaKnown RBP16.7■□□□□ 0.26
UBR5-201ENST00000220959 TOM1O60784 492 aa16.7■□□□□ 0.26
UBR5-201ENST00000220959 LMBR1LQ6UX01 489 aa16.7■□□□□ 0.26
UBR5-201ENST00000220959 PICK1Q9NRD5 415 aa16.7■□□□□ 0.26
UBR5-201ENST00000220959 TMOD4Q9NZQ9 345 aa16.7■□□□□ 0.26
UBR5-201ENST00000220959 TRIM6Q9C030 488 aaPredicted RBP16.7■□□□□ 0.26
UBR5-201ENST00000220959 DZIP3Q86Y13 1208 aaKnown RBP16.7■□□□□ 0.26
UBR5-201ENST00000220959 SH2D4AQ9H788 454 aa16.7■□□□□ 0.26
UBR5-201ENST00000220959 CIB2O75838 187 aa16.7■□□□□ 0.26
UBR5-201ENST00000220959 STMN2Q93045 179 aa16.69■□□□□ 0.26
UBR5-201ENST00000220959 ZNF830Q96NB3 372 aaPredicted RBP16.69■□□□□ 0.26
UBR5-201ENST00000220959 MBIPQ9NS73 344 aa16.69■□□□□ 0.26
UBR5-201ENST00000220959 KLHL40Q2TBA0 621 aa16.69■□□□□ 0.26
UBR5-201ENST00000220959 INTS8Q75QN2 995 aaKnown RBP16.69■□□□□ 0.26
UBR5-201ENST00000220959 USP48Q86UV5 1035 aa16.69■□□□□ 0.26
UBR5-201ENST00000220959 NACA2Q9H009 215 aa16.69■□□□□ 0.26
UBR5-201ENST00000220959 DACT1Q9NYF0 836 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms