RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 USP48Q86UV5 1035 aa12.56□□□□□ -0.4
KNOP1-201ENST00000219837 NEK11Q8NG66 645 aa12.56□□□□□ -0.4
KNOP1-201ENST00000219837 LMBR1Q8WVP7 490 aa12.56□□□□□ -0.4
KNOP1-201ENST00000219837 CAPZA3Q96KX2 299 aa12.56□□□□□ -0.4
KNOP1-201ENST00000219837 SRRTQ9BXP5 876 aaKnown RBP12.56□□□□□ -0.4
KNOP1-201ENST00000219837 GPCPD1Q9NPB8 672 aa12.56□□□□□ -0.4
KNOP1-201ENST00000219837 RBM28Q9NW13 759 aaKnown RBP12.56□□□□□ -0.4
KNOP1-201ENST00000219837 CEP83Q9Y592 693 aa12.56□□□□□ -0.4
KNOP1-201ENST00000219837 APOBRQ0VD83 1088 aa12.55□□□□□ -0.4
KNOP1-201ENST00000219837 SPATA24Q86W54 205 aa12.55□□□□□ -0.4
KNOP1-201ENST00000219837 IL16Q14005 1332 aa12.55□□□□□ -0.4
KNOP1-201ENST00000219837 RXRAP19793 462 aa12.55□□□□□ -0.4
KNOP1-201ENST00000219837 KSR2Q6VAB6 950 aa12.55□□□□□ -0.4
KNOP1-201ENST00000219837 NFATC2IPQ8NCF5 419 aa12.55□□□□□ -0.4
KNOP1-201ENST00000219837 BICDL2A1A5D9 508 aa12.55□□□□□ -0.4
KNOP1-201ENST00000219837 C11orf95C9JLR9 678 aaPredicted RBP12.55□□□□□ -0.4
KNOP1-201ENST00000219837 EIF4G3O43432 1585 aaKnown RBP12.55□□□□□ -0.4
KNOP1-201ENST00000219837 HARSP12081 509 aaKnown RBP12.55□□□□□ -0.4
KNOP1-201ENST00000219837 BMP2KLQ5H9B9 411 aa12.55□□□□□ -0.4
KNOP1-201ENST00000219837 SMIM23A6NLE4 172 aa12.55□□□□□ -0.4
KNOP1-201ENST00000219837 CHMP2AO43633 222 aa12.55□□□□□ -0.4
KNOP1-201ENST00000219837 ZWINTO95229 277 aa12.55□□□□□ -0.4
KNOP1-201ENST00000219837 GAS8O95995 478 aa12.55□□□□□ -0.4
KNOP1-201ENST00000219837 SNX16P57768 344 aa12.55□□□□□ -0.4
KNOP1-201ENST00000219837 MRPL50Q8N5N7 158 aaKnown RBP12.55□□□□□ -0.4
KNOP1-201ENST00000219837 TEX14Q8IWB6 1497 aa12.55□□□□□ -0.4
KNOP1-201ENST00000219837 PCDH11XQ9BZA7 1347 aa12.55□□□□□ -0.4
KNOP1-201ENST00000219837 PCDH11YQ9BZA8 1340 aa12.55□□□□□ -0.4
KNOP1-201ENST00000219837 MRPS27Q92552 414 aaKnown RBP12.55□□□□□ -0.4
KNOP1-201ENST00000219837 PLCB3Q01970 1234 aa12.54□□□□□ -0.4
KNOP1-201ENST00000219837 BMS1Q14692 1282 aaKnown RBP12.54□□□□□ -0.4
KNOP1-201ENST00000219837 UVSSAQ2YD98 709 aa12.54□□□□□ -0.4
KNOP1-201ENST00000219837 ESYT1Q9BSJ8 1104 aa12.54□□□□□ -0.4
KNOP1-201ENST00000219837 LMTK3Q96Q04 1460 aa12.54□□□□□ -0.4
KNOP1-201ENST00000219837 RNF34Q969K3 372 aa12.54□□□□□ -0.4
KNOP1-201ENST00000219837 ZNF830Q96NB3 372 aaPredicted RBP12.54□□□□□ -0.4
KNOP1-201ENST00000219837 TRERF1Q96PN7 1200 aa12.54□□□□□ -0.4
KNOP1-201ENST00000219837 CTNND2Q9UQB3 1225 aa12.54□□□□□ -0.4
KNOP1-201ENST00000219837 CCDC171Q6TFL3 1326 aa12.54□□□□□ -0.4
KNOP1-201ENST00000219837 CCDC129Q6ZRS4 1044 aa12.54□□□□□ -0.4
KNOP1-201ENST00000219837 EIF2AK4Q9P2K8 1649 aaKnown RBP12.54□□□□□ -0.4
KNOP1-201ENST00000219837 KRT9P35527 623 aa12.54□□□□□ -0.4
KNOP1-201ENST00000219837 TIGD1Q96MW7 591 aa12.54□□□□□ -0.4
KNOP1-201ENST00000219837 THOC2Q8NI27 1593 aaKnown RBP12.54□□□□□ -0.4
KNOP1-201ENST00000219837 TACC1O75410 805 aa12.54□□□□□ -0.4
KNOP1-201ENST00000219837 MAP7D1Q3KQU3 841 aa12.54□□□□□ -0.4
KNOP1-201ENST00000219837 CCDC65Q8IXS2 484 aa12.54□□□□□ -0.4
KNOP1-201ENST00000219837 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.53□□□□□ -0.47e-7■■■■■ 36.2
KNOP1-201ENST00000219837 AGTPBP1Q9UPW5 1226 aa12.53□□□□□ -0.4
KNOP1-201ENST00000219837 MAP3K5Q99683 1374 aa12.53□□□□□ -0.4
KNOP1-201ENST00000219837 PPP1R7Q15435 360 aa12.53□□□□□ -0.4
KNOP1-201ENST00000219837 STMN4Q9H169 189 aaPredicted RBP12.53□□□□□ -0.4
KNOP1-201ENST00000219837 BICC1Q9H694 974 aaKnown RBP12.53□□□□□ -0.4
KNOP1-201ENST00000219837 FAM169AQ9Y6X4 670 aa12.53□□□□□ -0.4
KNOP1-201ENST00000219837 URB2Q14146 1524 aaKnown RBP12.53□□□□□ -0.4
KNOP1-201ENST00000219837 DUOX2Q9NRD8 1548 aa12.53□□□□□ -0.4
KNOP1-201ENST00000219837 UFL1O94874 794 aa12.53□□□□□ -0.4
KNOP1-201ENST00000219837 CTAGE9A4FU28 777 aa12.53□□□□□ -0.4
KNOP1-201ENST00000219837 CALML3P27482 149 aa12.53□□□□□ -0.4
KNOP1-201ENST00000219837 RAPGEF1Q13905 1077 aa12.53□□□□□ -0.4
KNOP1-201ENST00000219837 FRMD4BQ9Y2L6 1034 aa12.53□□□□□ -0.4
KNOP1-201ENST00000219837 PAXBP1Q9Y5B6 917 aa12.53□□□□□ -0.4
KNOP1-201ENST00000219837 CTAGE15A4D2H0 777 aa12.53□□□□□ -0.4
KNOP1-201ENST00000219837 CCNT1O60563 726 aaKnown RBP12.53□□□□□ -0.4
KNOP1-201ENST00000219837 CRCPO75575 148 aa12.53□□□□□ -0.4
KNOP1-201ENST00000219837 CTAGE8P0CG41 777 aa12.53□□□□□ -0.4
KNOP1-201ENST00000219837 EIF6P56537 245 aaKnown RBP12.53□□□□□ -0.4
KNOP1-201ENST00000219837 ATP8B2P98198 1209 aa12.53□□□□□ -0.4
KNOP1-201ENST00000219837 RASA3Q14644 834 aa12.53□□□□□ -0.4
KNOP1-201ENST00000219837 CTAGE6Q86UF2 777 aa12.53□□□□□ -0.4
KNOP1-201ENST00000219837 CTAGE4Q8IX94 777 aa12.53□□□□□ -0.4
KNOP1-201ENST00000219837 NOD1Q9Y239 953 aa12.53□□□□□ -0.4
KNOP1-201ENST00000219837 FBF1Q8TES7 1133 aa12.52□□□□□ -0.4
KNOP1-201ENST00000219837 NPATQ14207 1427 aa12.52□□□□□ -0.4
KNOP1-201ENST00000219837 ATP2A1O14983 1001 aa12.52□□□□□ -0.4
KNOP1-201ENST00000219837 ALDH1L1O75891 902 aa12.52□□□□□ -0.4
KNOP1-201ENST00000219837 DTHD1Q6ZMT9 781 aa12.52□□□□□ -0.4
KNOP1-201ENST00000219837 STK32BQ9NY57 414 aa12.52□□□□□ -0.4
KNOP1-201ENST00000219837 EIF4A2Q14240 407 aaKnown RBP12.52□□□□□ -0.41
KNOP1-201ENST00000219837 MTHFSDQ2M296 383 aaKnown RBP12.52□□□□□ -0.41
KNOP1-201ENST00000219837 CCDC14Q49A88 953 aa12.52□□□□□ -0.41
KNOP1-201ENST00000219837 TXNDC16Q9P2K2 825 aa12.52□□□□□ -0.41
KNOP1-201ENST00000219837 TRIM75PA6NK02 468 aa12.52□□□□□ -0.41
KNOP1-201ENST00000219837 WDR44Q5JSH3 913 aa12.52□□□□□ -0.41
KNOP1-201ENST00000219837 PLCH2O75038 1416 aa12.52□□□□□ -0.41
KNOP1-201ENST00000219837 SLU7O95391 586 aaKnown RBP12.52□□□□□ -0.41
KNOP1-201ENST00000219837 SYT1P21579 422 aa12.52□□□□□ -0.41
KNOP1-201ENST00000219837 CCDC77Q9BR77 488 aa12.52□□□□□ -0.41
KNOP1-201ENST00000219837 ANAPC4Q9UJX5 808 aa12.52□□□□□ -0.41
KNOP1-201ENST00000219837 TPD52P55327 224 aaPredicted RBP12.51□□□□□ -0.41
KNOP1-201ENST00000219837 STX17P56962 302 aa12.51□□□□□ -0.41
KNOP1-201ENST00000219837 CWF19L2Q2TBE0 894 aaKnown RBP12.51□□□□□ -0.41
KNOP1-201ENST00000219837 DNAJC25Q9H1X3 360 aa12.51□□□□□ -0.41
KNOP1-201ENST00000219837 ZRANB1Q9UGI0 708 aa12.51□□□□□ -0.41
KNOP1-201ENST00000219837 DENND2AQ9ULE3 1009 aa12.51□□□□□ -0.41
KNOP1-201ENST00000219837 DDX39AO00148 427 aaKnown RBP12.51□□□□□ -0.41
KNOP1-201ENST00000219837 RRP9O43818 475 aaKnown RBP12.51□□□□□ -0.41
KNOP1-201ENST00000219837 EPB41P11171 864 aaKnown RBP12.51□□□□□ -0.41
KNOP1-201ENST00000219837 ZYXQ15942 572 aaKnown RBP12.51□□□□□ -0.41
KNOP1-201ENST00000219837 SH2D4AQ9H788 454 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms