RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 RASGRF1Q13972 1273 aa16.06■□□□□ 0.16
TIMP1-201ENST00000218388 TNIP1Q15025 636 aa16.06■□□□□ 0.16
TIMP1-201ENST00000218388 SPATA5Q8NB90 893 aa16.06■□□□□ 0.16
TIMP1-201ENST00000218388 OTUD7AQ8TE49 926 aaPredicted RBP16.06■□□□□ 0.16
TIMP1-201ENST00000218388 TBC1D22AQ8WUA7 517 aa16.06■□□□□ 0.16
TIMP1-201ENST00000218388 FBXW7Q969H0 707 aa16.06■□□□□ 0.16
TIMP1-201ENST00000218388 STAP2Q9UGK3 403 aa16.06■□□□□ 0.16
TIMP1-201ENST00000218388 IQSEC3Q9UPP2 1182 aaPredicted RBP16.06■□□□□ 0.16
TIMP1-201ENST00000218388 FAM205AQ6ZU69 1335 aa16.05■□□□□ 0.16
TIMP1-201ENST00000218388 USP17L3A6NCW0 530 aa16.05■□□□□ 0.16
TIMP1-201ENST00000218388 USP17L4A6NCW7 530 aa16.05■□□□□ 0.16
TIMP1-201ENST00000218388 YDJCA8MPS7 323 aa16.05■□□□□ 0.16
TIMP1-201ENST00000218388 MCAMP43121 646 aa16.05■□□□□ 0.16
TIMP1-201ENST00000218388 CHAF1AQ13111 956 aaPredicted RBP16.05■□□□□ 0.16
TIMP1-201ENST00000218388 STRIP1Q5VSL9 837 aa16.05■□□□□ 0.16
TIMP1-201ENST00000218388 TTLL5Q6EMB2 1281 aa16.05■□□□□ 0.16
TIMP1-201ENST00000218388 CIAPIN1Q6FI81 312 aa16.05■□□□□ 0.16
TIMP1-201ENST00000218388 USP17L1Q7RTZ2 530 aa16.05■□□□□ 0.16
TIMP1-201ENST00000218388 PLEKHM2Q8IWE5 1019 aa16.05■□□□□ 0.16
TIMP1-201ENST00000218388 ZGPATQ8N5A5 531 aaKnown RBP16.05■□□□□ 0.16
TIMP1-201ENST00000218388 WDR66Q8TBY9 1149 aa16.05■□□□□ 0.16
TIMP1-201ENST00000218388 OSBPL3Q9H4L5 887 aa16.05■□□□□ 0.16
TIMP1-201ENST00000218388 SCN9AQ15858 1988 aa16.05■□□□□ 0.16
TIMP1-201ENST00000218388 AKAP11Q9UKA4 1901 aa16.04■□□□□ 0.16
TIMP1-201ENST00000218388 MYO3BQ8WXR4 1341 aa16.04■□□□□ 0.16
TIMP1-201ENST00000218388 PDE4AP27815 886 aa16.04■□□□□ 0.16
TIMP1-201ENST00000218388 GTF2IP78347 998 aa16.04■□□□□ 0.16
TIMP1-201ENST00000218388 BOLA2Q9H3K6 86 aa16.04■□□□□ 0.16
TIMP1-201ENST00000218388 HMG20BQ9P0W2 317 aa16.04■□□□□ 0.16
TIMP1-201ENST00000218388 GOLGB1Q14789 3259 aaKnown RBP16.04■□□□□ 0.16
TIMP1-201ENST00000218388 RAD17O75943 681 aa16.03■□□□□ 0.16
TIMP1-201ENST00000218388 FKBP1AP62942 108 aaKnown RBP16.03■□□□□ 0.16
TIMP1-201ENST00000218388 TTF1Q15361 905 aaPredicted RBP16.03■□□□□ 0.16
TIMP1-201ENST00000218388 DNAJC2Q99543 621 aaKnown RBP16.03■□□□□ 0.16
TIMP1-201ENST00000218388 HAUS7Q99871 368 aa16.03■□□□□ 0.16
TIMP1-201ENST00000218388 COL1A1P02452 1464 aaPredicted RBP16.03■□□□□ 0.16
TIMP1-201ENST00000218388 SALL1Q9NSC2 1324 aa16.02■□□□□ 0.16
TIMP1-201ENST00000218388 CXCL9Q07325 125 aa16.02■□□□□ 0.16
TIMP1-201ENST00000218388 SCARF1Q14162 830 aa16.02■□□□□ 0.16
TIMP1-201ENST00000218388 MFSD14BQ5SR56 506 aa16.02■□□□□ 0.16
TIMP1-201ENST00000218388 TSHZ3Q63HK5 1081 aa16.02■□□□□ 0.16
TIMP1-201ENST00000218388 SPTY2D1Q68D10 685 aaPredicted RBP16.02■□□□□ 0.16
TIMP1-201ENST00000218388 DPY19L2Q6NUT2 758 aa16.02■□□□□ 0.16
TIMP1-201ENST00000218388 PI4K2BQ8TCG2 481 aa16.02■□□□□ 0.16
TIMP1-201ENST00000218388 PSMD14O00487 310 aa16.01■□□□□ 0.15
TIMP1-201ENST00000218388 IGSF3O75054 1194 aa16.01■□□□□ 0.15
TIMP1-201ENST00000218388 VIL1P09327 827 aaKnown RBP16.01■□□□□ 0.15
TIMP1-201ENST00000218388 ZAP70P43403 619 aa16.01■□□□□ 0.15
TIMP1-201ENST00000218388 RGS3P49796 1198 aa16.01■□□□□ 0.15
TIMP1-201ENST00000218388 DACT2Q5SW24 774 aa16.01■□□□□ 0.15
TIMP1-201ENST00000218388 GPC2Q8N158 579 aa16.01■□□□□ 0.15
TIMP1-201ENST00000218388 SNRKQ9NRH2 765 aa16.01■□□□□ 0.15
TIMP1-201ENST00000218388 PAG1Q9NWQ8 432 aa16.01■□□□□ 0.15
TIMP1-201ENST00000218388 JAG2Q9Y219 1238 aa16.01■□□□□ 0.15
TIMP1-201ENST00000218388 SUGT1Q9Y2Z0 365 aa16.01■□□□□ 0.15
TIMP1-201ENST00000218388 ZNF646O15015 1829 aaPredicted RBP16.01■□□□□ 0.15
TIMP1-201ENST00000218388 ZNF541Q9H0D2 1346 aa16■□□□□ 0.15
TIMP1-201ENST00000218388 RPS12P25398 132 aaKnown RBP16■□□□□ 0.15
TIMP1-201ENST00000218388 RSBN1LQ6PCB5 846 aaPredicted RBP16■□□□□ 0.15
TIMP1-201ENST00000218388 PI16Q6UXB8 463 aa16■□□□□ 0.15
TIMP1-201ENST00000218388 AGBL3Q8NEM8 1001 aa16■□□□□ 0.15
TIMP1-201ENST00000218388 KCNQ5Q9NR82 932 aa16■□□□□ 0.15
TIMP1-201ENST00000218388 ABCF2Q9UG63 623 aa16■□□□□ 0.15
TIMP1-201ENST00000218388 GJA3Q9Y6H8 435 aa16■□□□□ 0.15
TIMP1-201ENST00000218388 MAST3O60307 1309 aa15.99■□□□□ 0.15
TIMP1-201ENST00000218388 GOLIM4O00461 696 aa15.99■□□□□ 0.15
TIMP1-201ENST00000218388 CYP2E1P05181 493 aaPredicted RBP15.99■□□□□ 0.15
TIMP1-201ENST00000218388 LDHBP07195 334 aaKnown RBP15.99■□□□□ 0.15
TIMP1-201ENST00000218388 LRRFIP1Q32MZ4 808 aaKnown RBP15.99■□□□□ 0.15
TIMP1-201ENST00000218388 TTC22Q5TAA0 569 aa15.99■□□□□ 0.15
TIMP1-201ENST00000218388 ERICH6Q7L0X2 663 aa15.99■□□□□ 0.15
TIMP1-201ENST00000218388 CNTROBQ8N137 903 aa15.99■□□□□ 0.15
TIMP1-201ENST00000218388 LRP2BPQ9P2M1 347 aa15.99■□□□□ 0.15
TIMP1-201ENST00000218388 AK9Q5TCS8 1911 aa15.98■□□□□ 0.15
TIMP1-201ENST00000218388 TRIM6-TRIM34B2RNG4 842 aa15.98■□□□□ 0.15
TIMP1-201ENST00000218388 MMP14P50281 582 aa15.98■□□□□ 0.15
TIMP1-201ENST00000218388 MAP3K12Q12852 859 aa15.98■□□□□ 0.15
TIMP1-201ENST00000218388 TMED8Q6PL24 325 aaPredicted RBP15.98■□□□□ 0.15
TIMP1-201ENST00000218388 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.98■□□□□ 0.15
TIMP1-201ENST00000218388 HDAC9Q9UKV0 1011 aa15.98■□□□□ 0.15
TIMP1-201ENST00000218388 DOCK2Q92608 1830 aa15.98■□□□□ 0.15
TIMP1-201ENST00000218388 MAST2Q6P0Q8 1798 aa15.98■□□□□ 0.15
TIMP1-201ENST00000218388 GLTPD2A6NH11 291 aa15.97■□□□□ 0.15
TIMP1-201ENST00000218388 DZIP1Q86YF9 867 aaKnown RBP15.97■□□□□ 0.15
TIMP1-201ENST00000218388 SLF2Q8IX21 1173 aa15.97■□□□□ 0.15
TIMP1-201ENST00000218388 OGFOD1Q8N543 542 aa15.97■□□□□ 0.15
TIMP1-201ENST00000218388 EVI5LQ96CN4 794 aa15.97■□□□□ 0.15
TIMP1-201ENST00000218388 RAI14Q9P0K7 980 aa15.97■□□□□ 0.15
TIMP1-201ENST00000218388 NDUFB9Q9Y6M9 179 aa15.97■□□□□ 0.15
TIMP1-201ENST00000218388 MYH7P12883 1935 aa15.96■□□□□ 0.15
TIMP1-201ENST00000218388 IDH1O75874 414 aaKnown RBP15.96■□□□□ 0.15
TIMP1-201ENST00000218388 MAP4K4O95819 1239 aaPredicted RBP15.96■□□□□ 0.15
TIMP1-201ENST00000218388 LMOD1P29536 600 aaPredicted RBP15.96■□□□□ 0.15
TIMP1-201ENST00000218388 GSTO1P78417 241 aa15.96■□□□□ 0.15
TIMP1-201ENST00000218388 ZSCAN25Q6NSZ9 544 aa15.96■□□□□ 0.15
TIMP1-201ENST00000218388 TBC1D9Q6ZT07 1266 aa15.96■□□□□ 0.15
TIMP1-201ENST00000218388 CERS5Q8N5B7 392 aa15.96■□□□□ 0.15
TIMP1-201ENST00000218388 KBTBD3Q8NAB2 608 aa15.96■□□□□ 0.15
TIMP1-201ENST00000218388 DPF2Q92785 391 aa15.96■□□□□ 0.15
TIMP1-201ENST00000218388 FSD1Q9BTV5 496 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms