RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 Q6ZUG5 572 aa20.64■□□□□ 0.9
VRK1-201ENST00000216639 STOX1Q6ZVD7 989 aa20.64■□□□□ 0.9
VRK1-201ENST00000216639 FBXO41Q8TF61 875 aa20.64■□□□□ 0.9
VRK1-201ENST00000216639 ANKRD2Q9GZV1 360 aa20.64■□□□□ 0.9
VRK1-201ENST00000216639 TRIM37O94972 964 aa20.64■□□□□ 0.89
VRK1-201ENST00000216639 FOXD4L5Q5VV16 416 aaPredicted RBP20.64■□□□□ 0.89
VRK1-201ENST00000216639 FOXD4L4Q8WXT5 416 aaPredicted RBP20.64■□□□□ 0.89
VRK1-201ENST00000216639 BRWD3Q6RI45 1802 aa20.63■□□□□ 0.89
VRK1-201ENST00000216639 STX6O43752 255 aa20.63■□□□□ 0.89
VRK1-201ENST00000216639 FGAP02671 866 aa20.63■□□□□ 0.89
VRK1-201ENST00000216639 RBM6P78332 1123 aaKnown RBP20.63■□□□□ 0.89
VRK1-201ENST00000216639 NFIXQ14938 502 aa20.63■□□□□ 0.89
VRK1-201ENST00000216639 NECAB1Q8N987 351 aa20.63■□□□□ 0.89
VRK1-201ENST00000216639 AIDAQ96BJ3 306 aa20.63■□□□□ 0.89
VRK1-201ENST00000216639 WWC3Q9ULE0 1092 aa20.63■□□□□ 0.89
VRK1-201ENST00000216639 ZNF804BA4D1E1 1349 aa20.63■□□□□ 0.89
VRK1-201ENST00000216639 TCRBV5S4A2TA0A5A2 114 aa20.62■□□□□ 0.89
VRK1-201ENST00000216639 ZNF213O14771 459 aa20.62■□□□□ 0.89
VRK1-201ENST00000216639 VPS37DQ86XT2 251 aa20.62■□□□□ 0.89
VRK1-201ENST00000216639 CNBD1Q8NA66 436 aa20.62■□□□□ 0.89
VRK1-201ENST00000216639 ATP6V1DQ9Y5K8 247 aa20.62■□□□□ 0.89
VRK1-201ENST00000216639 A0A1B0GUL6 1792 aa20.62■□□□□ 0.89
VRK1-201ENST00000216639 DOCK2Q92608 1830 aa20.62■□□□□ 0.89
VRK1-201ENST00000216639 COL4A1P02462 1669 aa20.61■□□□□ 0.89
VRK1-201ENST00000216639 PDCP20941 246 aa20.61■□□□□ 0.89
VRK1-201ENST00000216639 SYT1P21579 422 aa20.61■□□□□ 0.89
VRK1-201ENST00000216639 COL9A3Q14050 684 aaPredicted RBP20.61■□□□□ 0.89
VRK1-201ENST00000216639 TTLL5Q6EMB2 1281 aa20.61■□□□□ 0.89
VRK1-201ENST00000216639 MAGEB6Q8N7X4 407 aa20.61■□□□□ 0.89
VRK1-201ENST00000216639 CHMP4CQ96CF2 233 aa20.61■□□□□ 0.89
VRK1-201ENST00000216639 FOXP2O15409 715 aa20.61■□□□□ 0.89
VRK1-201ENST00000216639 ZSCAN22P10073 491 aaPredicted RBP20.61■□□□□ 0.89
VRK1-201ENST00000216639 EXOSC10Q01780 885 aaKnown RBP20.61■□□□□ 0.89
VRK1-201ENST00000216639 ST3GAL1Q11201 340 aa20.61■□□□□ 0.89
VRK1-201ENST00000216639 KLHL40Q2TBA0 621 aa20.61■□□□□ 0.89
VRK1-201ENST00000216639 UBR3Q6ZT12 1888 aa20.61■□□□□ 0.89
VRK1-201ENST00000216639 GZF1Q9H116 711 aaPredicted RBP20.61■□□□□ 0.89
VRK1-201ENST00000216639 LRP2BPQ9P2M1 347 aa20.61■□□□□ 0.89
VRK1-201ENST00000216639 DDX49Q9Y6V7 483 aaKnown RBP20.61■□□□□ 0.89
VRK1-201ENST00000216639 APPP05067 770 aa20.6■□□□□ 0.89
VRK1-201ENST00000216639 BRF1Q92994 677 aa20.6■□□□□ 0.89
VRK1-201ENST00000216639 LMBRD1Q9NUN5 540 aa20.6■□□□□ 0.89
VRK1-201ENST00000216639 DENND2AQ9ULE3 1009 aa20.6■□□□□ 0.89
VRK1-201ENST00000216639 LAMA4Q16363 1823 aa20.59■□□□□ 0.89
VRK1-201ENST00000216639 SEMA3EO15041 775 aa20.59■□□□□ 0.89
VRK1-201ENST00000216639 GYG1P46976 350 aa20.59■□□□□ 0.89
VRK1-201ENST00000216639 ILDR1Q86SU0 546 aaPredicted RBP20.59■□□□□ 0.89
VRK1-201ENST00000216639 GTF3C6Q969F1 213 aa20.59■□□□□ 0.89
VRK1-201ENST00000216639 PRPF40AO75400 957 aaKnown RBP20.58■□□□□ 0.89
VRK1-201ENST00000216639 GNAT2P19087 354 aa20.58■□□□□ 0.89
VRK1-201ENST00000216639 STK3Q13188 491 aa20.58■□□□□ 0.89
VRK1-201ENST00000216639 RALYLQ86SE5 291 aaKnown RBP20.58■□□□□ 0.89
VRK1-201ENST00000216639 CCDC24Q8N4L8 307 aa20.58■□□□□ 0.89
VRK1-201ENST00000216639 NCOA7Q8NI08 942 aa20.58■□□□□ 0.89
VRK1-201ENST00000216639 STRBPQ96SI9 672 aaKnown RBP20.58■□□□□ 0.89
VRK1-201ENST00000216639 AGXT2Q9BYV1 514 aa20.58■□□□□ 0.89
VRK1-201ENST00000216639 TAF1P21675 1872 aa20.58■□□□□ 0.89
VRK1-201ENST00000216639 TM4SF1P30408 202 aa20.58■□□□□ 0.88
VRK1-201ENST00000216639 HAND2P61296 217 aa20.58■□□□□ 0.88
VRK1-201ENST00000216639 ST5P78524 1137 aa20.58■□□□□ 0.88
VRK1-201ENST00000216639 FBXL16Q8N461 479 aa20.58■□□□□ 0.88
VRK1-201ENST00000216639 MYO5AQ9Y4I1 1855 aaKnown RBP20.58■□□□□ 0.88
VRK1-201ENST00000216639 ZMYM6O95789 1325 aa20.58■□□□□ 0.88
VRK1-201ENST00000216639 A0A0G2JLW4 131 aa20.57■□□□□ 0.88
VRK1-201ENST00000216639 PATL2C9JE40 543 aaKnown RBP20.57■□□□□ 0.88
VRK1-201ENST00000216639 GYS1P13807 737 aa20.57■□□□□ 0.88
VRK1-201ENST00000216639 MCM5P33992 734 aa20.57■□□□□ 0.88
VRK1-201ENST00000216639 TRDNQ13061 729 aa20.57■□□□□ 0.88
VRK1-201ENST00000216639 ALX1Q15699 326 aa20.57■□□□□ 0.88
VRK1-201ENST00000216639 TXNRD1Q16881 649 aa20.57■□□□□ 0.88
VRK1-201ENST00000216639 MBD4O95243 580 aa20.56■□□□□ 0.88
VRK1-201ENST00000216639 F13A1P00488 732 aa20.56■□□□□ 0.88
VRK1-201ENST00000216639 GRAPQ13588 217 aa20.56■□□□□ 0.88
VRK1-201ENST00000216639 L1TD1Q5T7N2 865 aaKnown RBP20.56■□□□□ 0.88
VRK1-201ENST00000216639 LARP1BQ659C4 914 aaKnown RBP20.56■□□□□ 0.88
VRK1-201ENST00000216639 GRAPLQ8TC17 118 aaPredicted RBP20.56■□□□□ 0.88
VRK1-201ENST00000216639 FAM84BQ96KN1 310 aaPredicted RBP20.56■□□□□ 0.88
VRK1-201ENST00000216639 LLPHQ9BRT6 129 aaKnown RBP20.56■□□□□ 0.88
VRK1-201ENST00000216639 LRRC2Q9BYS8 371 aa20.56■□□□□ 0.88
VRK1-201ENST00000216639 WDR19Q8NEZ3 1342 aa20.56■□□□□ 0.88
VRK1-201ENST00000216639 PFKFB2O60825 505 aa20.56■□□□□ 0.88
VRK1-201ENST00000216639 FBXO33Q7Z6M2 555 aa20.56■□□□□ 0.88
VRK1-201ENST00000216639 NACAP1Q9BZK3 213 aa20.56■□□□□ 0.88
VRK1-201ENST00000216639 PNPLA7Q6ZV29 1317 aa20.55■□□□□ 0.88
VRK1-201ENST00000216639 TNRC6CQ9HCJ0 1690 aaKnown RBP20.55■□□□□ 0.88
VRK1-201ENST00000216639 PRR5LQ6MZQ0 368 aa20.55■□□□□ 0.88
VRK1-201ENST00000216639 RPGRQ92834 1020 aaKnown RBP20.55■□□□□ 0.88
VRK1-201ENST00000216639 ZNF274Q96GC6 653 aaPredicted RBP20.55■□□□□ 0.88
VRK1-201ENST00000216639 RAI14Q9P0K7 980 aa20.55■□□□□ 0.88
VRK1-201ENST00000216639 ABCF2Q9UG63 623 aa20.55■□□□□ 0.88
VRK1-201ENST00000216639 ISY1Q9ULR0 285 aaKnown RBP20.55■□□□□ 0.88
VRK1-201ENST00000216639 IQSEC3Q9UPP2 1182 aaPredicted RBP20.55■□□□□ 0.88
VRK1-201ENST00000216639 PDS5AQ29RF7 1337 aaKnown RBP20.55■□□□□ 0.88
VRK1-201ENST00000216639 GOLGA6L3A6NEY3 463 aa20.54■□□□□ 0.88
VRK1-201ENST00000216639 MBD3O95983 291 aa20.54■□□□□ 0.88
VRK1-201ENST00000216639 SERPINB2P05120 415 aa20.54■□□□□ 0.88
VRK1-201ENST00000216639 HIBADHP31937 336 aaKnown RBP20.54■□□□□ 0.88
VRK1-201ENST00000216639 NAPBQ9H115 298 aa20.54■□□□□ 0.88
VRK1-201ENST00000216639 MTMR6Q9Y217 621 aa20.54■□□□□ 0.88
VRK1-201ENST00000216639 VPS37CA5D8V6 355 aaPredicted RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms