RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 GPAA1O43292 621 aa17.58■□□□□ 0.4
EFNB1-201ENST00000204961 ATP1A3P13637 1013 aa17.58■□□□□ 0.4
EFNB1-201ENST00000204961 MTERF4Q7Z6M4 381 aaKnown RBP17.58■□□□□ 0.4
EFNB1-201ENST00000204961 HOMER1Q86YM7 354 aa17.58■□□□□ 0.4
EFNB1-201ENST00000204961 PXDNLA1KZ92 1463 aa17.57■□□□□ 0.4
EFNB1-201ENST00000204961 GREM2Q9H772 168 aa17.57■□□□□ 0.4
EFNB1-201ENST00000204961 SMIM22K7EJ46 135 aa17.57■□□□□ 0.4
EFNB1-201ENST00000204961 PFKFB2O60825 505 aa17.57■□□□□ 0.4
EFNB1-201ENST00000204961 IL15P40933 162 aaPredicted RBP17.57■□□□□ 0.4
EFNB1-201ENST00000204961 CCDC24Q8N4L8 307 aa17.57■□□□□ 0.4
EFNB1-201ENST00000204961 ANKARQ7Z5J8 1434 aa17.57■□□□□ 0.4
EFNB1-201ENST00000204961 TRDNQ13061 729 aa17.57■□□□□ 0.4
EFNB1-201ENST00000204961 ZNF827Q17R98 1081 aa17.57■□□□□ 0.4
EFNB1-201ENST00000204961 ILDR1Q86SU0 546 aaPredicted RBP17.57■□□□□ 0.4
EFNB1-201ENST00000204961 KCNB2Q92953 911 aa17.57■□□□□ 0.4
EFNB1-201ENST00000204961 ZNF396Q96N95 335 aaPredicted RBP17.56■□□□□ 0.4
EFNB1-201ENST00000204961 TRMT112Q9UI30 125 aaKnown RBP17.56■□□□□ 0.4
EFNB1-201ENST00000204961 NALCNQ8IZF0 1738 aa17.56■□□□□ 0.4
EFNB1-201ENST00000204961 TOPAZ1Q8N9V7 1692 aa17.56■□□□□ 0.4
EFNB1-201ENST00000204961 STX1AQ16623 288 aa17.55■□□□□ 0.4
EFNB1-201ENST00000204961 ZMYM1Q5SVZ6 1142 aa17.55■□□□□ 0.4
EFNB1-201ENST00000204961 CEP135Q66GS9 1140 aa17.55■□□□□ 0.4
EFNB1-201ENST00000204961 CEP57L1Q8IYX8 460 aa17.55■□□□□ 0.4
EFNB1-201ENST00000204961 PRIMPOLQ96LW4 560 aa17.55■□□□□ 0.4
EFNB1-201ENST00000204961 KCNJ14Q9UNX9 436 aa17.55■□□□□ 0.4
EFNB1-201ENST00000204961 CCAR2Q8N163 923 aaKnown RBP17.55■□□□□ 0.4
EFNB1-201ENST00000204961 PTPN14Q15678 1187 aa17.55■□□□□ 0.4
EFNB1-201ENST00000204961 LRP10Q7Z4F1 713 aa17.55■□□□□ 0.4
EFNB1-201ENST00000204961 XPO4Q9C0E2 1151 aaKnown RBP17.55■□□□□ 0.4
EFNB1-201ENST00000204961 ABCF2Q9UG63 623 aa17.55■□□□□ 0.4
EFNB1-201ENST00000204961 WTIPA6NIX2 430 aaPredicted RBP17.54■□□□□ 0.4
EFNB1-201ENST00000204961 FOXN1O15353 648 aa17.54■□□□□ 0.4
EFNB1-201ENST00000204961 EPB41L2O43491 1005 aaKnown RBP17.54■□□□□ 0.4
EFNB1-201ENST00000204961 MRPS27Q92552 414 aaKnown RBP17.54■□□□□ 0.4
EFNB1-201ENST00000204961 ACSBG1Q96GR2 724 aa17.54■□□□□ 0.4
EFNB1-201ENST00000204961 ZSCAN16Q9H4T2 348 aaPredicted RBP17.54■□□□□ 0.4
EFNB1-201ENST00000204961 TMOD3Q9NYL9 352 aa17.54■□□□□ 0.4
EFNB1-201ENST00000204961 MINDY4BA8MYZ0 360 aa17.54■□□□□ 0.4
EFNB1-201ENST00000204961 PRKAB2O43741 272 aa17.54■□□□□ 0.4
EFNB1-201ENST00000204961 ITGA6P23229 1130 aa17.54■□□□□ 0.4
EFNB1-201ENST00000204961 PHKA1P46020 1223 aa17.54■□□□□ 0.4
EFNB1-201ENST00000204961 PNOCQ13519 176 aa17.54■□□□□ 0.4
EFNB1-201ENST00000204961 GRAMD1CQ8IYS0 662 aa17.54■□□□□ 0.4
EFNB1-201ENST00000204961 SLC26A6Q9BXS9 759 aa17.54■□□□□ 0.4
EFNB1-201ENST00000204961 TMEM94Q12767 1356 aa17.54■□□□□ 0.4
EFNB1-201ENST00000204961 CARMIL3Q8ND23 1372 aa17.54■□□□□ 0.4
EFNB1-201ENST00000204961 KIF13AQ9H1H9 1805 aa17.54■□□□□ 0.4
EFNB1-201ENST00000204961 H7C1W4 665 aa17.54■□□□□ 0.4
EFNB1-201ENST00000204961 SPTLC2O15270 562 aa17.54■□□□□ 0.4
EFNB1-201ENST00000204961 SLC3A2P08195 630 aaKnown RBP17.54■□□□□ 0.4
EFNB1-201ENST00000204961 SNW1Q13573 536 aaKnown RBP17.54■□□□□ 0.4
EFNB1-201ENST00000204961 ALG1Q9BT22 464 aa17.54■□□□□ 0.4
EFNB1-201ENST00000204961 ZNF215Q9UL58 517 aaPredicted RBP17.54■□□□□ 0.4
EFNB1-201ENST00000204961 ZSCAN20P17040 1043 aaPredicted RBP17.53■□□□□ 0.4
EFNB1-201ENST00000204961 FAM160A1Q05DH4 1040 aa17.53■□□□□ 0.4
EFNB1-201ENST00000204961 USPL1Q5W0Q7 1092 aa17.53■□□□□ 0.4
EFNB1-201ENST00000204961 BICDL1Q6ZP65 573 aa17.53■□□□□ 0.4
EFNB1-201ENST00000204961 LRRC8AQ8IWT6 810 aa17.53■□□□□ 0.4
EFNB1-201ENST00000204961 STAMQ92783 540 aa17.53■□□□□ 0.4
EFNB1-201ENST00000204961 WWC3Q9ULE0 1092 aa17.53■□□□□ 0.4
EFNB1-201ENST00000204961 UTYO14607 1347 aa17.53■□□□□ 0.4
EFNB1-201ENST00000204961 SERPINC1P01008 464 aa17.53■□□□□ 0.4
EFNB1-201ENST00000204961 KLHL10Q6JEL2 608 aa17.53■□□□□ 0.4
EFNB1-201ENST00000204961 CASP7P55210 303 aa17.52■□□□□ 0.4
EFNB1-201ENST00000204961 IQCB1Q15051 598 aa17.52■□□□□ 0.4
EFNB1-201ENST00000204961 SYT10Q6XYQ8 523 aa17.52■□□□□ 0.4
EFNB1-201ENST00000204961 TRMT44Q8IYL2 757 aaKnown RBP17.52■□□□□ 0.4
EFNB1-201ENST00000204961 EPC1Q9H2F5 836 aa17.52■□□□□ 0.4
EFNB1-201ENST00000204961 ZSWIM4Q9H7M6 989 aa17.52■□□□□ 0.4
EFNB1-201ENST00000204961 ELP1O95163 1332 aa17.52■□□□□ 0.4
EFNB1-201ENST00000204961 PRDM1O75626 825 aa17.52■□□□□ 0.4
EFNB1-201ENST00000204961 MCAMP43121 646 aa17.52■□□□□ 0.4
EFNB1-201ENST00000204961 CFAP100Q494V2 611 aa17.52■□□□□ 0.4
EFNB1-201ENST00000204961 CPLX3Q8WVH0 158 aa17.52■□□□□ 0.4
EFNB1-201ENST00000204961 IL17RAQ96F46 866 aa17.52■□□□□ 0.4
EFNB1-201ENST00000204961 ARMT1Q9H993 441 aa17.52■□□□□ 0.4
EFNB1-201ENST00000204961 ANO10Q9NW15 660 aa17.52■□□□□ 0.4
EFNB1-201ENST00000204961 ZNF202O95125 648 aa17.52■□□□□ 0.39
EFNB1-201ENST00000204961 RABL6Q3YEC7 729 aaPredicted RBP17.52■□□□□ 0.39
EFNB1-201ENST00000204961 KIF6Q6ZMV9 814 aa17.52■□□□□ 0.39
EFNB1-201ENST00000204961 CYB5R4Q7L1T6 521 aa17.52■□□□□ 0.39
EFNB1-201ENST00000204961 CASP1P29466 404 aa17.51■□□□□ 0.39
EFNB1-201ENST00000204961 ELF2Q15723 593 aa17.51■□□□□ 0.39
EFNB1-201ENST00000204961 LRRN4CLQ8ND94 238 aa17.51■□□□□ 0.39
EFNB1-201ENST00000204961 SPTLC3Q9NUV7 552 aa17.51■□□□□ 0.39
EFNB1-201ENST00000204961 ADGRL3Q9HAR2 1447 aa17.51■□□□□ 0.39
EFNB1-201ENST00000204961 METAP2P50579 478 aaKnown RBP eCLIP17.51■□□□□ 0.39
EFNB1-201ENST00000204961 EXOSC10Q01780 885 aaKnown RBP17.51■□□□□ 0.39
EFNB1-201ENST00000204961 PLA2G4DQ86XP0 818 aa17.51■□□□□ 0.39
EFNB1-201ENST00000204961 TDRD7Q8NHU6 1098 aaKnown RBP17.51■□□□□ 0.39
EFNB1-201ENST00000204961 ST7Q9NRC1 585 aa17.51■□□□□ 0.39
EFNB1-201ENST00000204961 RCOR1Q9UKL0 485 aa17.51■□□□□ 0.39
EFNB1-201ENST00000204961 WDHD1O75717 1129 aaPredicted RBP17.5■□□□□ 0.39
EFNB1-201ENST00000204961 ANTXR2P58335 489 aa17.5■□□□□ 0.39
EFNB1-201ENST00000204961 TBC1D10CQ8IV04 446 aa17.5■□□□□ 0.39
EFNB1-201ENST00000204961 DHX40Q8IX18 779 aaKnown RBP17.5■□□□□ 0.39
EFNB1-201ENST00000204961 NCOA7Q8NI08 942 aa17.5■□□□□ 0.39
EFNB1-201ENST00000204961 AIDAQ96BJ3 306 aa17.5■□□□□ 0.39
EFNB1-201ENST00000204961 PIH1D3Q9NQM4 214 aaKnown RBP17.5■□□□□ 0.39
EFNB1-201ENST00000204961 CDC27P30260 824 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms