RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 RUFY2Q8WXA3 655 aa17.19■□□□□ 0.34
TMEM38A-201ENST00000187762 GPATCH3Q96I76 525 aa17.19■□□□□ 0.34
TMEM38A-201ENST00000187762 PDRG1Q9NUG6 133 aa17.19■□□□□ 0.34
TMEM38A-201ENST00000187762 ZNF142P52746 1687 aaPredicted RBP17.19■□□□□ 0.34
TMEM38A-201ENST00000187762 CAMTA1Q9Y6Y1 1673 aa17.18■□□□□ 0.34
TMEM38A-201ENST00000187762 IGKV5-2P06315 115 aa17.18■□□□□ 0.34
TMEM38A-201ENST00000187762 ERC1Q8IUD2 1116 aa17.18■□□□□ 0.34
TMEM38A-201ENST00000187762 CNPY4Q8N129 248 aa17.18■□□□□ 0.34
TMEM38A-201ENST00000187762 OVOS2A0A0G2JMS6 1433 aa17.18■□□□□ 0.34
TMEM38A-201ENST00000187762 FANCGO15287 622 aa17.18■□□□□ 0.34
TMEM38A-201ENST00000187762 SMC2O95347 1197 aa17.18■□□□□ 0.34
TMEM38A-201ENST00000187762 ME3Q16798 604 aa17.18■□□□□ 0.34
TMEM38A-201ENST00000187762 VPS53Q5VIR6 699 aa17.18■□□□□ 0.34
TMEM38A-201ENST00000187762 DDX21Q9NR30 783 aaKnown RBP eCLIP17.18■□□□□ 0.34
TMEM38A-201ENST00000187762 PARP3Q9Y6F1 533 aa17.18■□□□□ 0.34
TMEM38A-201ENST00000187762 TRPM3Q9HCF6 1732 aaPredicted RBP17.18■□□□□ 0.34
TMEM38A-201ENST00000187762 PIP4K2AP48426 406 aaPredicted RBP17.17■□□□□ 0.34
TMEM38A-201ENST00000187762 TRIM65Q6PJ69 517 aa17.17■□□□□ 0.34
TMEM38A-201ENST00000187762 KRT28Q7Z3Y7 464 aa17.17■□□□□ 0.34
TMEM38A-201ENST00000187762 EVI5LQ96CN4 794 aa17.17■□□□□ 0.34
TMEM38A-201ENST00000187762 VPS18Q9P253 973 aa17.17■□□□□ 0.34
TMEM38A-201ENST00000187762 SFPQP23246 707 aaKnown RBP eCLIP17.17■□□□□ 0.34
TMEM38A-201ENST00000187762 G3BP1Q13283 466 aaKnown RBP eCLIP17.17■□□□□ 0.34
TMEM38A-201ENST00000187762 NMIQ13287 307 aaPredicted RBP17.17■□□□□ 0.34
TMEM38A-201ENST00000187762 RIC3Q7Z5B4 369 aa17.17■□□□□ 0.34
TMEM38A-201ENST00000187762 CEP89Q96ST8 783 aa17.17■□□□□ 0.34
TMEM38A-201ENST00000187762 PARD6BQ9BYG5 372 aa17.17■□□□□ 0.34
TMEM38A-201ENST00000187762 BOLA2Q9H3K6 86 aa17.17■□□□□ 0.34
TMEM38A-201ENST00000187762 MKRN1Q9UHC7 482 aaKnown RBP17.17■□□□□ 0.34
TMEM38A-201ENST00000187762 RBM8AQ9Y5S9 174 aaKnown RBP17.17■□□□□ 0.34
TMEM38A-201ENST00000187762 ANKRD65E5RJM6 399 aa17.16■□□□□ 0.34
TMEM38A-201ENST00000187762 KIF1CO43896 1103 aaKnown RBP17.16■□□□□ 0.34
TMEM38A-201ENST00000187762 DDX58O95786 925 aaKnown RBP17.16■□□□□ 0.34
TMEM38A-201ENST00000187762 PDCP20941 246 aa17.16■□□□□ 0.34
TMEM38A-201ENST00000187762 GNL2Q13823 731 aaKnown RBP17.16■□□□□ 0.34
TMEM38A-201ENST00000187762 NECTIN1Q15223 517 aa17.16■□□□□ 0.34
TMEM38A-201ENST00000187762 LONRF2Q1L5Z9 754 aa17.16■□□□□ 0.34
TMEM38A-201ENST00000187762 SUFUQ9UMX1 484 aa17.16■□□□□ 0.34
TMEM38A-201ENST00000187762 MAP2K7O14733 419 aa17.16■□□□□ 0.34
TMEM38A-201ENST00000187762 NRDCO43847 1150 aa17.16■□□□□ 0.34
TMEM38A-201ENST00000187762 EPHA10Q5JZY3 1008 aa17.16■□□□□ 0.34
TMEM38A-201ENST00000187762 AOPEPQ8N6M6 819 aa17.16■□□□□ 0.34
TMEM38A-201ENST00000187762 ZSWIM6Q9HCJ5 1215 aa17.16■□□□□ 0.34
TMEM38A-201ENST00000187762 UTYO14607 1347 aa17.15■□□□□ 0.34
TMEM38A-201ENST00000187762 A0A087WWV3 80 aa17.15■□□□□ 0.34
TMEM38A-201ENST00000187762 CCP110O43303 1012 aa17.15■□□□□ 0.34
TMEM38A-201ENST00000187762 ZNF790Q6PG37 636 aa17.15■□□□□ 0.34
TMEM38A-201ENST00000187762 TMC6Q7Z403 805 aa17.15■□□□□ 0.34
TMEM38A-201ENST00000187762 CYP46A1Q9Y6A2 500 aa17.15■□□□□ 0.34
TMEM38A-201ENST00000187762 NPHP4O75161 1426 aaPredicted RBP17.15■□□□□ 0.34
TMEM38A-201ENST00000187762 ADAMTS7Q9UKP4 1686 aa17.15■□□□□ 0.34
TMEM38A-201ENST00000187762 A0A0D9SFI3 127 aa17.15■□□□□ 0.34
TMEM38A-201ENST00000187762 EFCAB13Q8IY85 973 aa17.15■□□□□ 0.34
TMEM38A-201ENST00000187762 TCEANC2Q96MN5 208 aa17.15■□□□□ 0.34
TMEM38A-201ENST00000187762 KDM6AO15550 1401 aaPredicted RBP17.14■□□□□ 0.34
TMEM38A-201ENST00000187762 MAP2K2P36507 400 aa17.14■□□□□ 0.33
TMEM38A-201ENST00000187762 CREB3L3Q68CJ9 461 aa17.14■□□□□ 0.33
TMEM38A-201ENST00000187762 RSRC2Q7L4I2 434 aaKnown RBP17.14■□□□□ 0.33
TMEM38A-201ENST00000187762 ANKRD20A12PQ8NF67 263 aa17.14■□□□□ 0.33
TMEM38A-201ENST00000187762 XAGE3Q8WTP9 111 aa17.14■□□□□ 0.33
TMEM38A-201ENST00000187762 MYD88Q99836 296 aa17.14■□□□□ 0.33
TMEM38A-201ENST00000187762 MED4Q9NPJ6 270 aa17.14■□□□□ 0.33
TMEM38A-201ENST00000187762 NLRP2Q9NX02 1062 aa17.14■□□□□ 0.33
TMEM38A-201ENST00000187762 TAF6LQ9Y6J9 622 aa17.14■□□□□ 0.33
TMEM38A-201ENST00000187762 CTAGE5O15320 804 aa17.14■□□□□ 0.33
TMEM38A-201ENST00000187762 ATP6V1AP38606 617 aa17.14■□□□□ 0.33
TMEM38A-201ENST00000187762 APOBRQ0VD83 1088 aa17.14■□□□□ 0.33
TMEM38A-201ENST00000187762 DDX17Q92841 729 aaKnown RBP17.14■□□□□ 0.33
TMEM38A-201ENST00000187762 EDC3Q96F86 508 aaKnown RBP17.14■□□□□ 0.33
TMEM38A-201ENST00000187762 PDE11AQ9HCR9 933 aa17.14■□□□□ 0.33
TMEM38A-201ENST00000187762 ANO10Q9NW15 660 aa17.14■□□□□ 0.33
TMEM38A-201ENST00000187762 SCN11AQ9UI33 1791 aa17.13■□□□□ 0.33
TMEM38A-201ENST00000187762 NEURL1BA8MQ27 555 aa17.13■□□□□ 0.33
TMEM38A-201ENST00000187762 SATB1Q01826 763 aa17.13■□□□□ 0.33
TMEM38A-201ENST00000187762 COPS6Q7L5N1 327 aa17.13■□□□□ 0.33
TMEM38A-201ENST00000187762 KCNB2Q92953 911 aa17.13■□□□□ 0.33
TMEM38A-201ENST00000187762 FSD1Q9BTV5 496 aa17.13■□□□□ 0.33
TMEM38A-201ENST00000187762 CEP57L1Q8IYX8 460 aa17.13■□□□□ 0.33
TMEM38A-201ENST00000187762 RABGGTAQ92696 567 aa17.13■□□□□ 0.33
TMEM38A-201ENST00000187762 SLC52A2Q9HAB3 445 aa17.13■□□□□ 0.33
TMEM38A-201ENST00000187762 TPCN1Q9ULQ1 816 aa17.13■□□□□ 0.33
TMEM38A-201ENST00000187762 ZRSR1Q15695 479 aaKnown RBP17.12■□□□□ 0.33
TMEM38A-201ENST00000187762 LRRC31Q6UY01 552 aa17.12■□□□□ 0.33
TMEM38A-201ENST00000187762 TADA2BQ86TJ2 420 aa17.12■□□□□ 0.33
TMEM38A-201ENST00000187762 RAPGEF4Q8WZA2 1011 aa17.12■□□□□ 0.33
TMEM38A-201ENST00000187762 XPO4Q9C0E2 1151 aaKnown RBP17.12■□□□□ 0.33
TMEM38A-201ENST00000187762 CCDC151A5D8V7 595 aa17.12■□□□□ 0.33
TMEM38A-201ENST00000187762 SLC27A2O14975 620 aa17.12■□□□□ 0.33
TMEM38A-201ENST00000187762 ZKSCAN1P17029 563 aaPredicted RBP17.12■□□□□ 0.33
TMEM38A-201ENST00000187762 PPP2R3AQ06190 1150 aa17.12■□□□□ 0.33
TMEM38A-201ENST00000187762 LARP1Q6PKG0 1096 aaKnown RBP17.12■□□□□ 0.33
TMEM38A-201ENST00000187762 MAP4K1Q92918 833 aa17.12■□□□□ 0.33
TMEM38A-201ENST00000187762 ZNF496Q96IT1 587 aaPredicted RBP17.12■□□□□ 0.33
TMEM38A-201ENST00000187762 TM6SF1Q9BZW5 370 aa17.12■□□□□ 0.33
TMEM38A-201ENST00000187762 GCKRQ14397 625 aa17.11■□□□□ 0.33
TMEM38A-201ENST00000187762 DHX8Q14562 1220 aaKnown RBP17.11■□□□□ 0.33
TMEM38A-201ENST00000187762 JAKMIP3Q5VZ66 844 aa17.11■□□□□ 0.33
TMEM38A-201ENST00000187762 PROSER2Q86WR7 435 aaPredicted RBP17.11■□□□□ 0.33
TMEM38A-201ENST00000187762 NDUFB9Q9Y6M9 179 aa17.11■□□□□ 0.33
TMEM38A-201ENST00000187762 DNAJC21Q5F1R6 531 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms