RNA–Protein interactions for RNA: ENST00000181839.8

CDK13-201, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDK13, Length 7,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-201ENST00000181839 LARGE2Q8N3Y3 721 aa20.25■□□□□ 0.83
CDK13-201ENST00000181839 EYA3Q99504 573 aa20.25■□□□□ 0.83
CDK13-201ENST00000181839 XRCC6P12956 609 aaKnown RBP eCLIP20.25■□□□□ 0.83
CDK13-201ENST00000181839 KIF22Q14807 665 aa20.25■□□□□ 0.83
CDK13-201ENST00000181839 NAA25Q14CX7 972 aa20.25■□□□□ 0.83
CDK13-201ENST00000181839 SEPT14Q6ZU15 432 aa20.25■□□□□ 0.83
CDK13-201ENST00000181839 ATP2A1O14983 1001 aa20.25■□□□□ 0.83
CDK13-201ENST00000181839 CTAGE5O15320 804 aa20.25■□□□□ 0.83
CDK13-201ENST00000181839 STRN3Q13033 797 aa20.25■□□□□ 0.83
CDK13-201ENST00000181839 BCS1LQ9Y276 419 aa20.25■□□□□ 0.83
CDK13-201ENST00000181839 CADPS2Q86UW7 1296 aa20.25■□□□□ 0.83
CDK13-201ENST00000181839 SSH1Q8WYL5 1049 aa20.25■□□□□ 0.83
CDK13-201ENST00000181839 TRIM7Q9C029 511 aa20.25■□□□□ 0.83
CDK13-201ENST00000181839 MKRN1Q9UHC7 482 aaKnown RBP20.25■□□□□ 0.83
CDK13-201ENST00000181839 KRT2P35908 639 aa20.24■□□□□ 0.83
CDK13-201ENST00000181839 IFT81Q8WYA0 676 aa20.24■□□□□ 0.83
CDK13-201ENST00000181839 FRMD4BQ9Y2L6 1034 aa20.24■□□□□ 0.83
CDK13-201ENST00000181839 STX10O60499 249 aa20.24■□□□□ 0.83
CDK13-201ENST00000181839 STX17P56962 302 aa20.24■□□□□ 0.83
CDK13-201ENST00000181839 GADL1Q6ZQY3 521 aa20.24■□□□□ 0.83
CDK13-201ENST00000181839 ERCC3P19447 782 aa20.24■□□□□ 0.83
CDK13-201ENST00000181839 Q6ZUG5 572 aa20.24■□□□□ 0.83
CDK13-201ENST00000181839 WDR7Q9Y4E6 1490 aa20.24■□□□□ 0.83
CDK13-201ENST00000181839 SEC62Q99442 399 aaKnown RBP20.24■□□□□ 0.83
CDK13-201ENST00000181839 SSFA2P28290 1259 aa20.24■□□□□ 0.83
CDK13-201ENST00000181839 HSPA1LP34931 641 aa20.24■□□□□ 0.83
CDK13-201ENST00000181839 FAM160A1Q05DH4 1040 aa20.24■□□□□ 0.83
CDK13-201ENST00000181839 DNAJC21Q5F1R6 531 aaKnown RBP20.24■□□□□ 0.83
CDK13-201ENST00000181839 DDX12PQ92771 950 aa20.24■□□□□ 0.83
CDK13-201ENST00000181839 GPIHBP1Q8IV16 184 aa20.23■□□□□ 0.83
CDK13-201ENST00000181839 PYM1Q9BRP8 204 aaKnown RBP20.23■□□□□ 0.83
CDK13-201ENST00000181839 NOL3O60936 208 aaKnown RBP20.23■□□□□ 0.83
CDK13-201ENST00000181839 TRAF1Q13077 416 aa20.23■□□□□ 0.83
CDK13-201ENST00000181839 FAM204AQ9H8W3 233 aa20.23■□□□□ 0.83
CDK13-201ENST00000181839 ECHDC1Q9NTX5 307 aa20.22■□□□□ 0.83
CDK13-201ENST00000181839 H0YIN7 160 aa20.22■□□□□ 0.83
CDK13-201ENST00000181839 APBA3O96018 575 aa20.22■□□□□ 0.83
CDK13-201ENST00000181839 KRT79Q5XKE5 535 aa20.22■□□□□ 0.83
CDK13-201ENST00000181839 VPS52Q8N1B4 723 aa20.22■□□□□ 0.83
CDK13-201ENST00000181839 LRRC59Q96AG4 307 aaKnown RBP20.22■□□□□ 0.83
CDK13-201ENST00000181839 PPP4R3BQ5MIZ7 849 aa20.22■□□□□ 0.83
CDK13-201ENST00000181839 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.22■□□□□ 0.833e-6■■□□□ 13.9
CDK13-201ENST00000181839 GOLGA6L9A6NEM1 432 aa20.22■□□□□ 0.83
CDK13-201ENST00000181839 CCNT1O60563 726 aaKnown RBP20.22■□□□□ 0.83
CDK13-201ENST00000181839 UBXN1Q04323 297 aa20.22■□□□□ 0.83
CDK13-201ENST00000181839 TLDC2A0PJX2 215 aa20.22■□□□□ 0.83
CDK13-201ENST00000181839 WASLO00401 505 aaPredicted RBP20.22■□□□□ 0.83
CDK13-201ENST00000181839 HS2ST1Q7LGA3 356 aa20.22■□□□□ 0.83
CDK13-201ENST00000181839 USTQ9Y2C2 406 aa20.22■□□□□ 0.83
CDK13-201ENST00000181839 PARP1P09874 1014 aaKnown RBP20.21■□□□□ 0.83
CDK13-201ENST00000181839 NEK11Q8NG66 645 aa20.21■□□□□ 0.83
CDK13-201ENST00000181839 RIOK1Q9BRS2 568 aaKnown RBP20.21■□□□□ 0.83
CDK13-201ENST00000181839 ANKFY1Q9P2R3 1169 aa20.21■□□□□ 0.83
CDK13-201ENST00000181839 CASC4Q6P4E1 433 aa20.21■□□□□ 0.83
CDK13-201ENST00000181839 KIAA1524Q8TCG1 905 aa20.21■□□□□ 0.83
CDK13-201ENST00000181839 PPFIA1Q13136 1202 aa20.21■□□□□ 0.83
CDK13-201ENST00000181839 RNASE9P60153 205 aaKnown RBP20.21■□□□□ 0.83
CDK13-201ENST00000181839 GIPC1O14908 333 aa20.21■□□□□ 0.83
CDK13-201ENST00000181839 IRS4O14654 1257 aaPredicted RBP20.21■□□□□ 0.83
CDK13-201ENST00000181839 ATP2A2P16615 1042 aaKnown RBP20.21■□□□□ 0.83
CDK13-201ENST00000181839 GIMAP6Q6P9H5 292 aa20.21■□□□□ 0.83
CDK13-201ENST00000181839 SESTD1Q86VW0 696 aa20.21■□□□□ 0.83
CDK13-201ENST00000181839 SKA2Q8WVK7 121 aaPredicted RBP20.2■□□□□ 0.82
CDK13-201ENST00000181839 GTPBP4Q9BZE4 634 aaKnown RBP20.2■□□□□ 0.82
CDK13-201ENST00000181839 KIF9Q9HAQ2 790 aa20.2■□□□□ 0.82
CDK13-201ENST00000181839 GOLGA6CA6NDK9 693 aa20.2■□□□□ 0.82
CDK13-201ENST00000181839 GOLGA6BA6NDN3 693 aa20.2■□□□□ 0.82
CDK13-201ENST00000181839 GOLGA6DP0CG33 693 aa20.2■□□□□ 0.82
CDK13-201ENST00000181839 ITKQ08881 620 aa20.2■□□□□ 0.82
CDK13-201ENST00000181839 BRF1Q92994 677 aa20.2■□□□□ 0.82
CDK13-201ENST00000181839 ARHGEF10LQ9HCE6 1279 aa20.2■□□□□ 0.82
CDK13-201ENST00000181839 GOLGA6AQ9NYA3 693 aa20.2■□□□□ 0.82
CDK13-201ENST00000181839 SMARCA4P51532 1647 aa20.2■□□□□ 0.82
CDK13-201ENST00000181839 NSMCE1Q8WV22 266 aa20.2■□□□□ 0.82
CDK13-201ENST00000181839 LEO1Q8WVC0 666 aaPredicted RBP20.2■□□□□ 0.82
CDK13-201ENST00000181839 NCKAP5LQ9HCH0 1330 aa20.2■□□□□ 0.82
CDK13-201ENST00000181839 CYLC1P35663 651 aaPredicted RBP20.2■□□□□ 0.82
CDK13-201ENST00000181839 IRX3P78415 501 aaPredicted RBP20.2■□□□□ 0.82
CDK13-201ENST00000181839 CNBD1Q8NA66 436 aa20.2■□□□□ 0.82
CDK13-201ENST00000181839 IFT74Q96LB3 600 aa20.2■□□□□ 0.82
CDK13-201ENST00000181839 FAM98CQ17RN3 349 aaKnown RBP20.19■□□□□ 0.82
CDK13-201ENST00000181839 LETM2Q2VYF4 491 aa20.19■□□□□ 0.82
CDK13-201ENST00000181839 TEX11Q8IYF3 940 aa20.19■□□□□ 0.82
CDK13-201ENST00000181839 CNNM2Q9H8M5 875 aa20.19■□□□□ 0.82
CDK13-201ENST00000181839 BTG4Q9NY30 223 aa20.19■□□□□ 0.82
CDK13-201ENST00000181839 ADCY5O95622 1261 aa20.19■□□□□ 0.82
CDK13-201ENST00000181839 NFATC2IPQ8NCF5 419 aa20.19■□□□□ 0.82
CDK13-201ENST00000181839 TACC3Q9Y6A5 838 aa20.19■□□□□ 0.82
CDK13-201ENST00000181839 NSRP1Q9H0G5 558 aaKnown RBP20.19■□□□□ 0.82
CDK13-201ENST00000181839 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.19■□□□□ 0.82
CDK13-201ENST00000181839 CCNL1Q9UK58 526 aaPredicted RBP20.19■□□□□ 0.82
CDK13-201ENST00000181839 FAM135AQ9P2D6 1515 aa20.19■□□□□ 0.82
CDK13-201ENST00000181839 CAMSAP2Q08AD1 1489 aa20.19■□□□□ 0.82
CDK13-201ENST00000181839 OATP04181 439 aa20.19■□□□□ 0.82
CDK13-201ENST00000181839 MCM4P33991 863 aa20.19■□□□□ 0.82
CDK13-201ENST00000181839 LMBR1LQ6UX01 489 aa20.19■□□□□ 0.82
CDK13-201ENST00000181839 CHMP6Q96FZ7 201 aa20.19■□□□□ 0.82
CDK13-201ENST00000181839 CCDC77Q9BR77 488 aa20.19■□□□□ 0.82
CDK13-201ENST00000181839 PA2G4Q9UQ80 394 aaKnown RBP20.19■□□□□ 0.82
CDK13-201ENST00000181839 INF2Q27J81 1249 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms