RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 LMBR1LQ6UX01 489 aa13.97□□□□□ -0.17
TSPAN9-201ENST00000011898 UBAC1Q9BSL1 405 aa13.97□□□□□ -0.17
TSPAN9-201ENST00000011898 ZSCAN16Q9H4T2 348 aaPredicted RBP13.97□□□□□ -0.17
TSPAN9-201ENST00000011898 KAT6BQ8WYB5 2073 aa13.97□□□□□ -0.17
TSPAN9-201ENST00000011898 GOLGA6L10A6NI86 522 aa13.97□□□□□ -0.17
TSPAN9-201ENST00000011898 BIN1O00499 593 aa13.97□□□□□ -0.17
TSPAN9-201ENST00000011898 SGSM2O43147 1006 aa13.97□□□□□ -0.17
TSPAN9-201ENST00000011898 PTGS1P23219 599 aa13.97□□□□□ -0.17
TSPAN9-201ENST00000011898 CCAR1Q8IX12 1150 aaKnown RBP13.97□□□□□ -0.17
TSPAN9-201ENST00000011898 FSD2A1L4K1 749 aa13.96□□□□□ -0.17
TSPAN9-201ENST00000011898 SKILP12757 684 aa13.96□□□□□ -0.17
TSPAN9-201ENST00000011898 KIF4BQ2VIQ3 1234 aa13.96□□□□□ -0.17
TSPAN9-201ENST00000011898 ODF2Q5BJF6 829 aa13.96□□□□□ -0.17
TSPAN9-201ENST00000011898 LRP2BPQ9P2M1 347 aa13.96□□□□□ -0.17
TSPAN9-201ENST00000011898 USP16Q9Y5T5 823 aa13.96□□□□□ -0.17
TSPAN9-201ENST00000011898 MAP2K2P36507 400 aa13.96□□□□□ -0.17
TSPAN9-201ENST00000011898 ANO6Q4KMQ2 910 aa13.96□□□□□ -0.17
TSPAN9-201ENST00000011898 ORC3Q9UBD5 711 aaPredicted RBP13.96□□□□□ -0.17
TSPAN9-201ENST00000011898 SIRT2Q8IXJ6 389 aa13.96□□□□□ -0.17
TSPAN9-201ENST00000011898 CEP89Q96ST8 783 aa13.96□□□□□ -0.17
TSPAN9-201ENST00000011898 TMEM63CQ9P1W3 806 aa13.96□□□□□ -0.17
TSPAN9-201ENST00000011898 DACH1Q9UI36 760 aa13.96□□□□□ -0.17
TSPAN9-201ENST00000011898 NEMFO60524 1076 aa13.96□□□□□ -0.18
TSPAN9-201ENST00000011898 CAVIN2O95810 425 aa13.96□□□□□ -0.18
TSPAN9-201ENST00000011898 PPFIBP1Q86W92 1011 aa13.96□□□□□ -0.18
TSPAN9-201ENST00000011898 RAB11FIP4Q86YS3 637 aa13.96□□□□□ -0.18
TSPAN9-201ENST00000011898 GNL3LQ9NVN8 582 aaKnown RBP13.96□□□□□ -0.18
TSPAN9-201ENST00000011898 CWC25Q9NXE8 425 aaPredicted RBP13.96□□□□□ -0.18
TSPAN9-201ENST00000011898 ABCF2Q9UG63 623 aa13.96□□□□□ -0.18
TSPAN9-201ENST00000011898 TRPC5Q9UL62 973 aaPredicted RBP13.96□□□□□ -0.18
TSPAN9-201ENST00000011898 RGPD1P0DJD0 1748 aa13.95□□□□□ -0.18
TSPAN9-201ENST00000011898 DNAI1Q9UI46 699 aa13.95□□□□□ -0.18
TSPAN9-201ENST00000011898 SLC3A2P08195 630 aaKnown RBP13.95□□□□□ -0.18
TSPAN9-201ENST00000011898 MCMDC2Q4G0Z9 681 aa13.95□□□□□ -0.18
TSPAN9-201ENST00000011898 Q6ZUG5 572 aa13.95□□□□□ -0.18
TSPAN9-201ENST00000011898 RUFY3Q7L099 469 aa13.95□□□□□ -0.18
TSPAN9-201ENST00000011898 NFATC2IPQ8NCF5 419 aa13.95□□□□□ -0.18
TSPAN9-201ENST00000011898 USP44Q9H0E7 712 aa13.95□□□□□ -0.18
TSPAN9-201ENST00000011898 LGR6Q9HBX8 967 aa13.95□□□□□ -0.18
TSPAN9-201ENST00000011898 TMOD3Q9NYL9 352 aa13.95□□□□□ -0.18
TSPAN9-201ENST00000011898 SNX14Q9Y5W7 946 aa13.95□□□□□ -0.18
TSPAN9-201ENST00000011898 TXLNAP40222 546 aa13.95□□□□□ -0.18
TSPAN9-201ENST00000011898 PPP1R9BQ96SB3 815 aa13.95□□□□□ -0.18
TSPAN9-201ENST00000011898 VPS18Q9P253 973 aa13.95□□□□□ -0.18
TSPAN9-201ENST00000011898 ERBB4Q15303 1308 aa13.95□□□□□ -0.18
TSPAN9-201ENST00000011898 CCDC171Q6TFL3 1326 aa13.95□□□□□ -0.18
TSPAN9-201ENST00000011898 STX1AQ16623 288 aa13.94□□□□□ -0.18
TSPAN9-201ENST00000011898 LDHAL6AQ6ZMR3 332 aa13.94□□□□□ -0.18
TSPAN9-201ENST00000011898 SMARCE1Q969G3 411 aa13.94□□□□□ -0.18
TSPAN9-201ENST00000011898 NAPBQ9H115 298 aa13.94□□□□□ -0.18
TSPAN9-201ENST00000011898 INCENPQ9NQS7 918 aa13.94□□□□□ -0.18
TSPAN9-201ENST00000011898 AFF2P51816 1311 aa13.94□□□□□ -0.18
TSPAN9-201ENST00000011898 CASQ1P31415 396 aa13.94□□□□□ -0.18
TSPAN9-201ENST00000011898 VPS72Q15906 364 aa13.94□□□□□ -0.18
TSPAN9-201ENST00000011898 IL17REQ8NFR9 667 aa13.94□□□□□ -0.18
TSPAN9-201ENST00000011898 ZSCAN12O43309 604 aa13.94□□□□□ -0.18
TSPAN9-201ENST00000011898 CHAMP1Q96JM3 812 aa13.94□□□□□ -0.18
TSPAN9-201ENST00000011898 SPATA31A1Q5TZJ5 1347 aa13.94□□□□□ -0.18
TSPAN9-201ENST00000011898 BRD1O95696 1058 aa13.94□□□□□ -0.18
TSPAN9-201ENST00000011898 GPTP24298 496 aa13.94□□□□□ -0.18
TSPAN9-201ENST00000011898 FAM173BQ6P4H8 233 aa13.94□□□□□ -0.18
TSPAN9-201ENST00000011898 DNAJC25Q9H1X3 360 aa13.94□□□□□ -0.18
TSPAN9-201ENST00000011898 PALD1Q9ULE6 856 aa13.94□□□□□ -0.18
TSPAN9-201ENST00000011898 OVOS2A0A0G2JMS6 1433 aa13.93□□□□□ -0.18
TSPAN9-201ENST00000011898 ABCA3Q99758 1704 aa13.93□□□□□ -0.18
TSPAN9-201ENST00000011898 TYRO3Q06418 890 aa13.93□□□□□ -0.18
TSPAN9-201ENST00000011898 WASF1Q92558 559 aa13.93□□□□□ -0.18
TSPAN9-201ENST00000011898 BICC1Q9H694 974 aaKnown RBP13.93□□□□□ -0.18
TSPAN9-201ENST00000011898 RAI14Q9P0K7 980 aa13.93□□□□□ -0.18
TSPAN9-201ENST00000011898 RAD50Q92878 1312 aa13.93□□□□□ -0.18
TSPAN9-201ENST00000011898 MEGF6O75095 1541 aa13.93□□□□□ -0.18
TSPAN9-201ENST00000011898 GADD45BO75293 160 aaPredicted RBP13.93□□□□□ -0.18
TSPAN9-201ENST00000011898 NAA25Q14CX7 972 aa13.93□□□□□ -0.18
TSPAN9-201ENST00000011898 FAM98CQ17RN3 349 aaKnown RBP13.93□□□□□ -0.18
TSPAN9-201ENST00000011898 ISM2Q6H9L7 571 aa13.93□□□□□ -0.18
TSPAN9-201ENST00000011898 NEK11Q8NG66 645 aa13.93□□□□□ -0.18
TSPAN9-201ENST00000011898 DDX21Q9NR30 783 aaKnown RBP eCLIP13.93□□□□□ -0.18
TSPAN9-201ENST00000011898 CPSF2Q9P2I0 782 aaKnown RBP13.93□□□□□ -0.18
TSPAN9-201ENST00000011898 SPATA31A5Q5VU36 1347 aa13.93□□□□□ -0.18
TSPAN9-201ENST00000011898 SPATA31A7Q8IWB4 1347 aa13.93□□□□□ -0.18
TSPAN9-201ENST00000011898 CRYBG1Q9Y4K1 1723 aa13.92□□□□□ -0.18
TSPAN9-201ENST00000011898 ZSCAN26Q16670 478 aa13.92□□□□□ -0.18
TSPAN9-201ENST00000011898 FBXO41Q8TF61 875 aa13.92□□□□□ -0.18
TSPAN9-201ENST00000011898 RGPD5Q99666 1765 aa13.92□□□□□ -0.18
TSPAN9-201ENST00000011898 EBAG9O00559 213 aa13.92□□□□□ -0.18
TSPAN9-201ENST00000011898 ZNF853P0CG23 659 aa13.92□□□□□ -0.18
TSPAN9-201ENST00000011898 HSPA4P34932 840 aa13.92□□□□□ -0.18
TSPAN9-201ENST00000011898 GNG11P61952 73 aa13.92□□□□□ -0.18
TSPAN9-201ENST00000011898 ELF2Q15723 593 aa13.92□□□□□ -0.18
TSPAN9-201ENST00000011898 SLC52A2Q9HAB3 445 aa13.92□□□□□ -0.18
TSPAN9-201ENST00000011898 WWC3Q9ULE0 1092 aa13.92□□□□□ -0.18
TSPAN9-201ENST00000011898 ATP6V1AP38606 617 aa13.92□□□□□ -0.18
TSPAN9-201ENST00000011898 TRMT112Q9UI30 125 aaKnown RBP13.92□□□□□ -0.18
TSPAN9-201ENST00000011898 MINDY4BA8MYZ0 360 aa13.91□□□□□ -0.18
TSPAN9-201ENST00000011898 ATP2C2O75185 946 aa13.91□□□□□ -0.18
TSPAN9-201ENST00000011898 ZNF772Q68DY9 489 aaPredicted RBP13.91□□□□□ -0.18
TSPAN9-201ENST00000011898 MICALCLQ6ZW33 695 aa13.91□□□□□ -0.18
TSPAN9-201ENST00000011898 MICU3Q86XE3 530 aa13.91□□□□□ -0.18
TSPAN9-201ENST00000011898 KLHDC4Q8TBB5 520 aa13.91□□□□□ -0.18
TSPAN9-201ENST00000011898 ERVV-2B6SEH9 535 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 151.3 ms