RNA–Protein interactions for RNA: ENST00000011653.8

CD4-201, Transcript of CD4 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD4, Length 3,114 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-201ENST00000011653 C21orf2O43822 256 aa12.63□□□□□ -0.39
CD4-201ENST00000011653 FGFR2P21802 821 aa12.63□□□□□ -0.39
CD4-201ENST00000011653 MASTLQ96GX5 879 aa12.63□□□□□ -0.39
CD4-201ENST00000011653 ESYT1Q9BSJ8 1104 aa12.63□□□□□ -0.39
CD4-201ENST00000011653 KIAA1211Q6ZU35 1233 aa12.63□□□□□ -0.39
CD4-201ENST00000011653 ANKRD2Q9GZV1 360 aa12.63□□□□□ -0.39
CD4-201ENST00000011653 HMG20BQ9P0W2 317 aa12.63□□□□□ -0.39
CD4-201ENST00000011653 AOX1Q06278 1338 aa12.63□□□□□ -0.39
CD4-201ENST00000011653 RTL9Q8NET4 1388 aa12.62□□□□□ -0.39
CD4-201ENST00000011653 DPEP1P16444 411 aa12.62□□□□□ -0.39
CD4-201ENST00000011653 DOK7Q18PE1 504 aa12.62□□□□□ -0.39
CD4-201ENST00000011653 PRPF40BQ6NWY9 871 aaKnown RBP12.62□□□□□ -0.39
CD4-201ENST00000011653 CLEC17AQ6ZS10 378 aa12.62□□□□□ -0.39
CD4-201ENST00000011653 FAM84BQ96KN1 310 aaPredicted RBP12.62□□□□□ -0.39
CD4-201ENST00000011653 LRP2BPQ9P2M1 347 aa12.62□□□□□ -0.39
CD4-201ENST00000011653 GGA1Q9UJY5 639 aa12.62□□□□□ -0.39
CD4-201ENST00000011653 BBOX1O75936 387 aa12.62□□□□□ -0.39
CD4-201ENST00000011653 CYP2E1P05181 493 aaPredicted RBP12.62□□□□□ -0.39
CD4-201ENST00000011653 CDK11BP21127 795 aaKnown RBP12.62□□□□□ -0.39
CD4-201ENST00000011653 SPATA5Q8NB90 893 aa12.62□□□□□ -0.39
CD4-201ENST00000011653 TRIM44Q96DX7 344 aaPredicted RBP12.62□□□□□ -0.39
CD4-201ENST00000011653 HIBADHP31937 336 aaKnown RBP12.62□□□□□ -0.39
CD4-201ENST00000011653 UBE4AQ14139 1066 aa12.62□□□□□ -0.39
CD4-201ENST00000011653 PIH1D3Q9NQM4 214 aaKnown RBP12.62□□□□□ -0.39
CD4-201ENST00000011653 POLLQ9UGP5 575 aa12.62□□□□□ -0.39
CD4-201ENST00000011653 ALDH1B1P30837 517 aa12.61□□□□□ -0.39
CD4-201ENST00000011653 DPP8Q6V1X1 898 aaPredicted RBP12.61□□□□□ -0.39
CD4-201ENST00000011653 MPNDQ8N594 471 aa12.61□□□□□ -0.39
CD4-201ENST00000011653 USP26Q9BXU7 913 aa12.61□□□□□ -0.39
CD4-201ENST00000011653 RAI14Q9P0K7 980 aa12.61□□□□□ -0.39
CD4-201ENST00000011653 XDHP47989 1333 aa12.61□□□□□ -0.39
CD4-201ENST00000011653 NUCB2P80303 420 aa12.61□□□□□ -0.39
CD4-201ENST00000011653 SLC9C2Q5TAH2 1124 aa12.61□□□□□ -0.39
CD4-201ENST00000011653 ZNF589Q86UQ0 364 aaPredicted RBP12.61□□□□□ -0.39
CD4-201ENST00000011653 GAS2L3Q86XJ1 694 aa12.61□□□□□ -0.39
CD4-201ENST00000011653 KBTBD3Q8NAB2 608 aa12.61□□□□□ -0.39
CD4-201ENST00000011653 MTFR1LQ9H019 292 aa12.61□□□□□ -0.39
CD4-201ENST00000011653 GNL3LQ9NVN8 582 aaKnown RBP12.61□□□□□ -0.39
CD4-201ENST00000011653 BAG4O95429 457 aaKnown RBP12.6□□□□□ -0.39
CD4-201ENST00000011653 NOL8Q76FK4 1167 aaKnown RBP12.6□□□□□ -0.39
CD4-201ENST00000011653 SLC16A10Q8TF71 515 aa12.6□□□□□ -0.39
CD4-201ENST00000011653 CRAMP1Q96RY5 1269 aa12.6□□□□□ -0.39
CD4-201ENST00000011653 REC8O95072 547 aa12.6□□□□□ -0.39
CD4-201ENST00000011653 KLHL40Q2TBA0 621 aa12.6□□□□□ -0.39
CD4-201ENST00000011653 DDX49Q9Y6V7 483 aaKnown RBP12.6□□□□□ -0.39
CD4-201ENST00000011653 UQCRFS1P1P0C7P4 283 aa12.6□□□□□ -0.39
CD4-201ENST00000011653 HOXA10P31260 410 aaPredicted RBP12.6□□□□□ -0.39
CD4-201ENST00000011653 ESPNB1AK53 854 aa12.59□□□□□ -0.39
CD4-201ENST00000011653 F8W031 263 aaPredicted RBP12.59□□□□□ -0.39
CD4-201ENST00000011653 ST18O60284 1047 aa12.59□□□□□ -0.39
CD4-201ENST00000011653 PTH1RQ03431 593 aa12.59□□□□□ -0.39
CD4-201ENST00000011653 STK11IPQ8N1F8 1099 aa12.59□□□□□ -0.39
CD4-201ENST00000011653 MAGEB6Q8N7X4 407 aa12.59□□□□□ -0.39
CD4-201ENST00000011653 MIGA1Q8NAN2 632 aa12.59□□□□□ -0.39
CD4-201ENST00000011653 TBC1D16Q8TBP0 767 aa12.59□□□□□ -0.39
CD4-201ENST00000011653 RUFY2Q8WXA3 655 aa12.59□□□□□ -0.39
CD4-201ENST00000011653 NAP1L5Q96NT1 182 aaPredicted RBP12.59□□□□□ -0.39
CD4-201ENST00000011653 ZC3H12CQ9C0D7 883 aaKnown RBP12.59□□□□□ -0.39
CD4-201ENST00000011653 COL24A1Q17RW2 1714 aa12.59□□□□□ -0.39
CD4-201ENST00000011653 LAMB2P55268 1798 aa12.59□□□□□ -0.39
CD4-201ENST00000011653 DBNDD1Q9H9R9 158 aa12.59□□□□□ -0.39
CD4-201ENST00000011653 NAP1L2Q9ULW6 460 aaPredicted RBP12.59□□□□□ -0.39
CD4-201ENST00000011653 BCS1LQ9Y276 419 aa12.59□□□□□ -0.39
CD4-201ENST00000011653 ATP6V0A2Q9Y487 856 aa12.59□□□□□ -0.39
CD4-201ENST00000011653 SGSM2O43147 1006 aa12.58□□□□□ -0.4
CD4-201ENST00000011653 APPP05067 770 aa12.58□□□□□ -0.4
CD4-201ENST00000011653 CWC22Q9HCG8 908 aaKnown RBP12.58□□□□□ -0.4
CD4-201ENST00000011653 VPS53Q5VIR6 699 aa12.57□□□□□ -0.4
CD4-201ENST00000011653 KLRG2A4D1S0 409 aaPredicted RBP12.57□□□□□ -0.4
CD4-201ENST00000011653 SLC4A8Q2Y0W8 1093 aa12.57□□□□□ -0.4
CD4-201ENST00000011653 SP8Q8IXZ3 490 aa12.57□□□□□ -0.4
CD4-201ENST00000011653 TTLL6Q8N841 843 aa12.57□□□□□ -0.4
CD4-201ENST00000011653 ANP32BQ92688 251 aaKnown RBP12.57□□□□□ -0.4
CD4-201ENST00000011653 CNKSR1Q969H4 720 aa12.57□□□□□ -0.4
CD4-201ENST00000011653 MXD3Q9BW11 206 aa12.57□□□□□ -0.4
CD4-201ENST00000011653 LEMD3Q9Y2U8 911 aa12.57□□□□□ -0.4
CD4-201ENST00000011653 ZNF532Q9HCE3 1301 aa12.57□□□□□ -0.4
CD4-201ENST00000011653 RNF113AO15541 343 aaKnown RBP12.57□□□□□ -0.4
CD4-201ENST00000011653 PRDX5P30044 214 aa12.57□□□□□ -0.4
CD4-201ENST00000011653 OSBP2Q969R2 916 aa12.57□□□□□ -0.4
CD4-201ENST00000011653 PUS7LQ9H0K6 701 aaKnown RBP12.57□□□□□ -0.4
CD4-201ENST00000011653 PALD1Q9ULE6 856 aa12.57□□□□□ -0.4
CD4-201ENST00000011653 ATP2B4P23634 1241 aa12.56□□□□□ -0.4
CD4-201ENST00000011653 ARID4AP29374 1257 aaPredicted RBP12.56□□□□□ -0.4
CD4-201ENST00000011653 GTF2IP78347 998 aa12.56□□□□□ -0.4
CD4-201ENST00000011653 MCTP1Q6DN14 999 aa12.56□□□□□ -0.4
CD4-201ENST00000011653 ZNF804AQ7Z570 1209 aa12.56□□□□□ -0.4
CD4-201ENST00000011653 M0R2C6 588 aa12.56□□□□□ -0.4
CD4-201ENST00000011653 CCDC173Q0VFZ6 552 aa12.56□□□□□ -0.4
CD4-201ENST00000011653 MAP3K12Q12852 859 aa12.56□□□□□ -0.4
CD4-201ENST00000011653 UPF3BQ9BZI7 483 aaKnown RBP12.56□□□□□ -0.4
CD4-201ENST00000011653 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.56□□□□□ -0.4
CD4-201ENST00000011653 KCNQ5Q9NR82 932 aa12.56□□□□□ -0.4
CD4-201ENST00000011653 CYP7A1P22680 504 aa12.55□□□□□ -0.4
CD4-201ENST00000011653 NASPP49321 788 aaPredicted RBP12.55□□□□□ -0.4
CD4-201ENST00000011653 AOC3Q16853 763 aa12.55□□□□□ -0.4
CD4-201ENST00000011653 FBXO33Q7Z6M2 555 aa12.55□□□□□ -0.4
CD4-201ENST00000011653 NLGN2Q8NFZ4 835 aa12.55□□□□□ -0.4
CD4-201ENST00000011653 LARP6Q9BRS8 491 aaKnown RBP12.55□□□□□ -0.4
CD4-201ENST00000011653 HIP1O00291 1037 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms