RNA–Protein interactions for RNA: ENSMUST00000160369.7

Ercc1-203, Transcript of DNA excision repair protein ERCC-1, mousemouse

TSL 1 (best) BASIC

Gene Ercc1, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-203ENSMUST00000160369 Spata18Q0P557 537 aa16.82■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Nol8Q3UHX0 1147 aaKnown RBP16.82■□□□□ 0.28
Ercc1-203ENSMUST00000160369 AsnsQ61024 561 aa16.82■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Pde3bQ61409 1100 aa16.82■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Rhot2Q8JZN7 620 aa16.82■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Mroh6V9GX81 722 aa16.82■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Col20a1Q923P0 1320 aa16.81■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Ccdc146E9Q9F7 977 aa16.81■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Adam7O35227 789 aa16.81■□□□□ 0.28
Ercc1-203ENSMUST00000160369 D1Pas1P16381 660 aa16.81■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Slc10a5Q5PT54 434 aa16.81■□□□□ 0.28
Ercc1-203ENSMUST00000160369 LdhdQ7TNG8 484 aa16.81■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Taf5lQ91WQ5 589 aa16.81■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Ascc2Q91WR3 749 aa16.81■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Myh13B1AR69 1938 aa16.8■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Gm3893E9Q1I1 302 aa16.8■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Cap1P40124 474 aa16.8■□□□□ 0.28
Ercc1-203ENSMUST00000160369 LeprP48356 1162 aa16.8■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Npr3P70180 536 aa16.8■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Fam228bQ497Q6 232 aa16.8■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Vps54Q5SPW0 977 aa16.8■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Kbtbd13Q8C828 458 aa16.8■□□□□ 0.28
Ercc1-203ENSMUST00000160369 ParnQ8VDG3 624 aa16.8■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Ppil2Q9D787 521 aa16.8■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Myo1bP46735 1107 aa16.79■□□□□ 0.28
Ercc1-203ENSMUST00000160369 PgfP49764 158 aa16.79■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Ube3cQ80U95 1083 aa16.79■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Cfap69Q8BH53 942 aa16.79■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Ppp4r3bQ922R5 820 aa16.79■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Fam84aQ9D650 292 aa16.79■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Rbm6S4R1W5 1118 aaKnown RBP16.79■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Rbbp8nlA2ABX0 614 aa16.78■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Fdx1P46656 188 aa16.78■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Krt40Q6IFX3 439 aa16.78■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Ptpdc1Q6NZK8 747 aa16.78■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Sez6lQ6P1D5 963 aa16.78■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Mboat7Q8CHK3 473 aa16.78■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Uba5Q8VE47 403 aa16.78■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Ndfip2Q91ZP6 311 aa16.78■□□□□ 0.28
Ercc1-203ENSMUST00000160369 FliiQ9JJ28 1271 aa16.78■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Pappa2E9PZ87 1789 aa16.77■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Myh3P13541 1940 aa16.77■□□□□ 0.28
Ercc1-203ENSMUST00000160369 SfswapQ3USH5 945 aaKnown RBP16.77■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Zbtb45Q52KG4 520 aa16.77■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Il17raQ60943 864 aa16.77■□□□□ 0.28
Ercc1-203ENSMUST00000160369 CrkQ64010 304 aa16.77■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Ltv1Q6NSQ7 470 aaKnown RBP16.77■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Mxd3Q80US8 206 aa16.77■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Golim4Q8BXA1 655 aa16.77■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Trappc12Q8K2L8 797 aa16.77■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Tgm5Q9D7I9 724 aa16.77■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Bcar3Q9QZK2 820 aa16.77■□□□□ 0.28
Ercc1-203ENSMUST00000160369 Trpm7Q923J1 1863 aa16.76■□□□□ 0.27
Ercc1-203ENSMUST00000160369 ZyxQ62523 564 aa16.76■□□□□ 0.27
Ercc1-203ENSMUST00000160369 SpidrQ8BGX7 933 aa16.76■□□□□ 0.27
Ercc1-203ENSMUST00000160369 MthfsQ9D110 203 aa16.76■□□□□ 0.27
Ercc1-203ENSMUST00000160369 Fzd9Q9R216 592 aa16.76■□□□□ 0.27
Ercc1-203ENSMUST00000160369 Chd5A2A8L1 1946 aa16.76■□□□□ 0.27
Ercc1-203ENSMUST00000160369 Aox4Q3TYQ9 1336 aa16.75■□□□□ 0.27
Ercc1-203ENSMUST00000160369 Zkscan2G3X952 960 aa16.75■□□□□ 0.27
Ercc1-203ENSMUST00000160369 Pla2g4fQ50L41 855 aa16.75■□□□□ 0.27
Ercc1-203ENSMUST00000160369 Map3k12Q60700 888 aa16.75■□□□□ 0.27
Ercc1-203ENSMUST00000160369 Angel2Q8K1C0 544 aa16.75■□□□□ 0.27
Ercc1-203ENSMUST00000160369 Lman1lQ8VCD3 505 aa16.75■□□□□ 0.27
Ercc1-203ENSMUST00000160369 Zcchc17Q9ESX4 241 aaKnown RBP16.75■□□□□ 0.27
Ercc1-203ENSMUST00000160369 Brd1E9PZ26 1189 aaKnown RBP16.74■□□□□ 0.27
Ercc1-203ENSMUST00000160369 UncxO08934 530 aa16.74■□□□□ 0.27
Ercc1-203ENSMUST00000160369 Wnt10bP48614 389 aa16.74■□□□□ 0.27
Ercc1-203ENSMUST00000160369 Oog3Q3UWY1 500 aa16.74■□□□□ 0.27
Ercc1-203ENSMUST00000160369 Il1rapl2Q9ERS6 686 aa16.74■□□□□ 0.27
Ercc1-203ENSMUST00000160369 Dhx16G3X8X0 1044 aaKnown RBP16.73■□□□□ 0.27
Ercc1-203ENSMUST00000160369 Rbm46P86049 533 aa16.73■□□□□ 0.27
Ercc1-203ENSMUST00000160369 Tmed8Q3UHI4 326 aa16.73■□□□□ 0.27
Ercc1-203ENSMUST00000160369 Lamc2Q61092 1191 aa16.73■□□□□ 0.27
Ercc1-203ENSMUST00000160369 Scaf8Q6DID3 1268 aa16.73■□□□□ 0.27
Ercc1-203ENSMUST00000160369 Smc5Q8CG46 1101 aaKnown RBP16.73■□□□□ 0.27
Ercc1-203ENSMUST00000160369 Hmox1P14901 289 aa16.72■□□□□ 0.27
Ercc1-203ENSMUST00000160369 Irf6P97431 467 aa16.72■□□□□ 0.27
Ercc1-203ENSMUST00000160369 Washc4Q3UMB9 1173 aa16.72■□□□□ 0.27
Ercc1-203ENSMUST00000160369 Brf1Q8CFK2 676 aa16.72■□□□□ 0.27
Ercc1-203ENSMUST00000160369 Hps4Q99KG7 671 aa16.72■□□□□ 0.27
Ercc1-203ENSMUST00000160369 Map7O88735 730 aa16.71■□□□□ 0.27
Ercc1-203ENSMUST00000160369 Gja3Q64448 417 aa16.71■□□□□ 0.27
Ercc1-203ENSMUST00000160369 Olfm5Q8BU90 496 aa16.71■□□□□ 0.27
Ercc1-203ENSMUST00000160369 Upf1Q9EPU0 1124 aaKnown RBP16.71■□□□□ 0.27
Ercc1-203ENSMUST00000160369 Cxcl11Q9JHH5 100 aa16.71■□□□□ 0.27
Ercc1-203ENSMUST00000160369 NrapQ80XB4 1728 aa16.7■□□□□ 0.26
Ercc1-203ENSMUST00000160369 Zbtb7aO88939 569 aaKnown RBP16.7■□□□□ 0.26
Ercc1-203ENSMUST00000160369 Cdcp1Q5U462 833 aa16.7■□□□□ 0.26
Ercc1-203ENSMUST00000160369 Cyp24a1Q64441 514 aa16.7■□□□□ 0.26
Ercc1-203ENSMUST00000160369 PdgfdQ925I7 370 aa16.7■□□□□ 0.26
Ercc1-203ENSMUST00000160369 Prss51A0A286YDY8 319 aa16.69■□□□□ 0.26
Ercc1-203ENSMUST00000160369 GabreA2AMW3 916 aa16.69■□□□□ 0.26
Ercc1-203ENSMUST00000160369 Esyt2Q3TZZ7 845 aa16.69■□□□□ 0.26
Ercc1-203ENSMUST00000160369 Tm4sf1Q64302 202 aa16.69■□□□□ 0.26
Ercc1-203ENSMUST00000160369 Ankrd13aQ80UP5 588 aa16.69■□□□□ 0.26
Ercc1-203ENSMUST00000160369 Map10Q8BJS7 891 aa16.69■□□□□ 0.26
Ercc1-203ENSMUST00000160369 Aldh1b1Q9CZS1 519 aa16.69■□□□□ 0.26
Ercc1-203ENSMUST00000160369 KnstrnQ9D9Z1 312 aaKnown RBP16.69■□□□□ 0.26
Ercc1-203ENSMUST00000160369 Telo2Q9DC40 840 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 19 ms