RNA–Protein interactions for RNA: ENSMUST00000111438.1

Ddx55-202, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

TSL 2 BASIC

Gene Ddx55, Length 2,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-202ENSMUST00000111438 ArxO35085 564 aa14.69□□□□□ -0.06
Ddx55-202ENSMUST00000111438 PnnO35691 725 aaKnown RBP14.69□□□□□ -0.06
Ddx55-202ENSMUST00000111438 XpcP51612 930 aa14.69□□□□□ -0.06
Ddx55-202ENSMUST00000111438 Pla2g4fQ50L41 855 aa14.69□□□□□ -0.06
Ddx55-202ENSMUST00000111438 Ddx11Q6AXC6 880 aa14.69□□□□□ -0.06
Ddx55-202ENSMUST00000111438 Gpr101Q80T62 511 aa14.69□□□□□ -0.06
Ddx55-202ENSMUST00000111438 Nell2Q61220 819 aa14.68□□□□□ -0.06
Ddx55-202ENSMUST00000111438 Sept12Q9D451 317 aa14.68□□□□□ -0.06
Ddx55-202ENSMUST00000111438 Krt40Q6IFX3 439 aa14.68□□□□□ -0.06
Ddx55-202ENSMUST00000111438 Erc1Q99MI1 1120 aa14.68□□□□□ -0.06
Ddx55-202ENSMUST00000111438 Appbp2Q9DAX9 585 aa14.68□□□□□ -0.06
Ddx55-202ENSMUST00000111438 Pmfbp1Q9WVQ0 1022 aa14.68□□□□□ -0.06
Ddx55-202ENSMUST00000111438 FAM186AQ9D9R9 1790 aa14.68□□□□□ -0.06
Ddx55-202ENSMUST00000111438 Kif22Q3V300 660 aa14.67□□□□□ -0.06
Ddx55-202ENSMUST00000111438 Nek11Q8C0Q4 628 aa14.67□□□□□ -0.06
Ddx55-202ENSMUST00000111438 Top1mtQ8R4U6 593 aa14.67□□□□□ -0.06
Ddx55-202ENSMUST00000111438 Rad50P70388 1312 aa14.67□□□□□ -0.06
Ddx55-202ENSMUST00000111438 Usp17lbE9Q9U0 468 aa14.67□□□□□ -0.06
Ddx55-202ENSMUST00000111438 Siah1aP61092 282 aa14.67□□□□□ -0.06
Ddx55-202ENSMUST00000111438 Slc44a4Q91VA1 707 aa14.67□□□□□ -0.06
Ddx55-202ENSMUST00000111438 Ubxn10Q8BG34 277 aa14.66□□□□□ -0.06
Ddx55-202ENSMUST00000111438 Ptcd1Q8C2E4 695 aaKnown RBP14.66□□□□□ -0.06
Ddx55-202ENSMUST00000111438 StrbpQ91WM1 672 aaKnown RBP14.66□□□□□ -0.06
Ddx55-202ENSMUST00000111438 PhaxQ9JJT9 385 aaKnown RBP14.66□□□□□ -0.06
Ddx55-202ENSMUST00000111438 Zfp646Q6NV66 1788 aa14.66□□□□□ -0.06
Ddx55-202ENSMUST00000111438 Zbtb7aO88939 569 aaKnown RBP14.66□□□□□ -0.06
Ddx55-202ENSMUST00000111438 Dpf2Q61103 391 aaKnown RBP14.66□□□□□ -0.06
Ddx55-202ENSMUST00000111438 MthfsQ9D110 203 aa14.65□□□□□ -0.06
Ddx55-202ENSMUST00000111438 Cyp2c69E9PXC3 491 aa14.65□□□□□ -0.06
Ddx55-202ENSMUST00000111438 Cyp2d9P11714 504 aa14.65□□□□□ -0.06
Ddx55-202ENSMUST00000111438 Cyp2c40P56657 491 aa14.65□□□□□ -0.06
Ddx55-202ENSMUST00000111438 AaasP58742 546 aa14.65□□□□□ -0.06
Ddx55-202ENSMUST00000111438 Paxip1Q6NZQ4 1056 aa14.65□□□□□ -0.06
Ddx55-202ENSMUST00000111438 GorabQ8BRM2 368 aa14.65□□□□□ -0.06
Ddx55-202ENSMUST00000111438 RarsQ9D0I9 660 aaKnown RBP14.65□□□□□ -0.06
Ddx55-202ENSMUST00000111438 Myh6Q02566 1938 aaKnown RBP14.65□□□□□ -0.06
Ddx55-202ENSMUST00000111438 TrhQ62361 256 aa14.65□□□□□ -0.07
Ddx55-202ENSMUST00000111438 CbarpQ66L44 698 aa14.65□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Tmem179Q8BHH9 233 aa14.65□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Mlh1Q9JK91 760 aa14.65□□□□□ -0.07
Ddx55-202ENSMUST00000111438 NesQ6P5H2 1864 aaKnown RBP14.64□□□□□ -0.07
Ddx55-202ENSMUST00000111438 D830030K20RikE9PYQ5 218 aa14.64□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Gm3043K7N693 218 aa14.64□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Gm16440K7N6G6 218 aa14.64□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Gm2244L7N2A3 218 aa14.64□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Gm3278L7N2D2 218 aa14.64□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Gm8271L7N2E2 218 aa14.64□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Ms4a2P20490 235 aa14.64□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Lmbrd2Q8C561 694 aa14.64□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Spire2Q8K1S6 718 aa14.64□□□□□ -0.07
Ddx55-202ENSMUST00000111438 NsmfQ99NF2 532 aa14.64□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Gm3893E9Q1I1 302 aa14.64□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Ifit2Q64112 472 aa14.64□□□□□ -0.07
Ddx55-202ENSMUST00000111438 B4galnt4Q766D5 1034 aa14.64□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Trim56Q80VI1 734 aaKnown RBP14.64□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Stag1Q9D3E6 1258 aa14.64□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Phf14Q9D4H9 881 aa14.64□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Mtmr2Q9Z2D1 643 aa14.64□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Frmd7A2AD83 703 aa14.63□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Terf1P70371 421 aa14.63□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Olfm5Q8BU90 496 aa14.63□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Gtf2iQ9ESZ8 998 aaKnown RBP14.63□□□□□ -0.07
Ddx55-202ENSMUST00000111438 IcoslgQ9JHJ8 322 aa14.63□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Nfe2l3Q9WTM4 660 aa14.63□□□□□ -0.07
Ddx55-202ENSMUST00000111438 AfdnQ9QZQ1 1820 aaKnown RBP14.63□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Krt24A1L317 512 aa14.63□□□□□ -0.07
Ddx55-202ENSMUST00000111438 MecomP14404 1042 aa14.63□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Map3k9Q3U1V8 1077 aa14.63□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Pcdhb9E9Q5G2 828 aa14.62□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Cxcl11Q9JHH5 100 aa14.62□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Ly6iQ9WU67 134 aa14.62□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Tsc2Q61037 1814 aa14.62□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Col20a1Q923P0 1320 aa14.62□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Washc4Q3UMB9 1173 aa14.62□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Cyp24a1Q64441 514 aa14.62□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Pdzrn3Q69ZS0 1063 aa14.62□□□□□ -0.07
Ddx55-202ENSMUST00000111438 FktnQ8R507 461 aa14.62□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Pla2g12bQ99P27 195 aa14.62□□□□□ -0.07
Ddx55-202ENSMUST00000111438 RubcnlQ3TD16 648 aa14.61□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Cfap69Q8BH53 942 aa14.61□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Rnaseh2aQ9CWY8 301 aa14.61□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Tfip11Q9ERA6 838 aaKnown RBP14.61□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Gm10093D3YYI8 482 aa14.61□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Hdac1O09106 482 aaKnown RBP14.61□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Hap1O35668 628 aa14.61□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Hspd1P63038 573 aaKnown RBP14.61□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Thrap3Q569Z6 951 aaKnown RBP14.61□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Znf18Q810A1 556 aa14.61□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Lmod1Q8BVA4 595 aa14.61□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Ak2Q9WTP6 239 aa14.61□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Adgra3Q7TT36 1310 aa14.61□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Pnpla6Q3TRM4 1355 aa14.6□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Rbm8a2A0A0N4SUH6 174 aa14.6□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Esyt2Q3TZZ7 845 aa14.6□□□□□ -0.07
Ddx55-202ENSMUST00000111438 AidaQ8C4Q6 305 aa14.6□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Adam1bQ8R534 806 aa14.6□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Uba5Q8VE47 403 aa14.6□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Polr3dQ91WD1 398 aa14.6□□□□□ -0.07
Ddx55-202ENSMUST00000111438 Rbm8aQ9CWZ3 174 aa14.6□□□□□ -0.07
Ddx55-202ENSMUST00000111438 1700018B08RikQ9DA83 213 aa14.6□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms