RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 PtmsQ9D0J8 101 aaKnown RBP17.52■□□□□ 0.4
Nup88-202ENSMUST00000108530 MthfsQ9D110 203 aa17.52■□□□□ 0.4
Nup88-202ENSMUST00000108530 Carmil3Q3UFQ8 1375 aa17.52■□□□□ 0.39
Nup88-202ENSMUST00000108530 Fbxl16A2RT62 479 aa17.52■□□□□ 0.39
Nup88-202ENSMUST00000108530 Stat1P42225 749 aa17.52■□□□□ 0.39
Nup88-202ENSMUST00000108530 Siah1aP61092 282 aa17.52■□□□□ 0.39
Nup88-202ENSMUST00000108530 NfixP70257 488 aa17.52■□□□□ 0.39
Nup88-202ENSMUST00000108530 1810065E05RikQ5NC41 235 aa17.52■□□□□ 0.39
Nup88-202ENSMUST00000108530 Atad2Q8CDM1 1040 aa17.52■□□□□ 0.39
Nup88-202ENSMUST00000108530 Iffo2Q8R2V2 512 aa17.52■□□□□ 0.39
Nup88-202ENSMUST00000108530 Slc14a2Q8R4T9 930 aa17.52■□□□□ 0.39
Nup88-202ENSMUST00000108530 MeiocA2AG06 965 aa17.51■□□□□ 0.39
Nup88-202ENSMUST00000108530 Fam83bQ0VBM2 1012 aa17.51■□□□□ 0.39
Nup88-202ENSMUST00000108530 Ell2Q3UKU1 639 aa17.51■□□□□ 0.39
Nup88-202ENSMUST00000108530 Ppp1r10Q80W00 888 aaKnown RBP17.51■□□□□ 0.39
Nup88-202ENSMUST00000108530 Cnot6lQ8VEG6 555 aa17.51■□□□□ 0.39
Nup88-202ENSMUST00000108530 Myh3P13541 1940 aa17.51■□□□□ 0.39
Nup88-202ENSMUST00000108530 Sh3tc1G3X9F6 1346 aa17.51■□□□□ 0.39
Nup88-202ENSMUST00000108530 Il15P48346 162 aa17.51■□□□□ 0.39
Nup88-202ENSMUST00000108530 MpndQ3TV65 487 aa17.51■□□□□ 0.39
Nup88-202ENSMUST00000108530 Me3Q8BMF3 604 aa17.51■□□□□ 0.39
Nup88-202ENSMUST00000108530 Mast3Q3U214 1321 aa17.5■□□□□ 0.39
Nup88-202ENSMUST00000108530 Myh15E9Q264 1925 aa17.5■□□□□ 0.39
Nup88-202ENSMUST00000108530 Myh4Q5SX39 1939 aa17.5■□□□□ 0.39
Nup88-202ENSMUST00000108530 Izumo3A6PWV3 263 aa17.5■□□□□ 0.39
Nup88-202ENSMUST00000108530 Aknad1E9Q8N6 675 aa17.5■□□□□ 0.39
Nup88-202ENSMUST00000108530 Znf692Q3U381 531 aa17.5■□□□□ 0.39
Nup88-202ENSMUST00000108530 Pold4Q9CWP8 107 aa17.5■□□□□ 0.39
Nup88-202ENSMUST00000108530 Sil1Q9EPK6 465 aa17.5■□□□□ 0.39
Nup88-202ENSMUST00000108530 FosbP13346 338 aa17.5■□□□□ 0.39
Nup88-202ENSMUST00000108530 Stat5bP42232 786 aa17.5■□□□□ 0.39
Nup88-202ENSMUST00000108530 HdlbpQ8VDJ3 1268 aaKnown RBP17.5■□□□□ 0.39
Nup88-202ENSMUST00000108530 CrcpO35427 148 aa17.49■□□□□ 0.39
Nup88-202ENSMUST00000108530 Slc7a3P70423 618 aa17.49■□□□□ 0.39
Nup88-202ENSMUST00000108530 Ppp1r21Q3TDD9 780 aa17.49■□□□□ 0.39
Nup88-202ENSMUST00000108530 Alx1Q8C8B0 326 aa17.49■□□□□ 0.39
Nup88-202ENSMUST00000108530 Mad1l1Q9WTX8 717 aaKnown RBP17.49■□□□□ 0.39
Nup88-202ENSMUST00000108530 Letm1Q9Z2I0 738 aa17.49■□□□□ 0.39
Nup88-202ENSMUST00000108530 Prdm1Q60636 856 aa17.48■□□□□ 0.39
Nup88-202ENSMUST00000108530 Cyp24a1Q64441 514 aa17.48■□□□□ 0.39
Nup88-202ENSMUST00000108530 Chrna2Q91X60 512 aa17.48■□□□□ 0.39
Nup88-202ENSMUST00000108530 Rbm43Q99J64 343 aa17.48■□□□□ 0.39
Nup88-202ENSMUST00000108530 Pald1P70261 859 aa17.48■□□□□ 0.39
Nup88-202ENSMUST00000108530 ImmtQ8CAQ8 757 aaKnown RBP17.48■□□□□ 0.39
Nup88-202ENSMUST00000108530 Adam1bQ8R534 806 aa17.48■□□□□ 0.39
Nup88-202ENSMUST00000108530 Gripap1Q8VD04 806 aa17.48■□□□□ 0.39
Nup88-202ENSMUST00000108530 Eaf2Q91ZD6 262 aa17.48■□□□□ 0.39
Nup88-202ENSMUST00000108530 Slc4a4O88343 1079 aa17.47■□□□□ 0.39
Nup88-202ENSMUST00000108530 Nxf7Q80SZ6 620 aaKnown RBP17.47■□□□□ 0.39
Nup88-202ENSMUST00000108530 Hap1O35668 628 aa17.47■□□□□ 0.39
Nup88-202ENSMUST00000108530 Prl7d1P04769 244 aa17.47■□□□□ 0.39
Nup88-202ENSMUST00000108530 SfswapQ3USH5 945 aaKnown RBP17.47■□□□□ 0.39
Nup88-202ENSMUST00000108530 Fsd1Q7TPM6 496 aa17.47■□□□□ 0.39
Nup88-202ENSMUST00000108530 Slc51aQ8R000 340 aa17.47■□□□□ 0.39
Nup88-202ENSMUST00000108530 Bloc1s2Q9CWG9 143 aa17.47■□□□□ 0.39
Nup88-202ENSMUST00000108530 Dydc2Q9D3X8 139 aa17.47■□□□□ 0.39
Nup88-202ENSMUST00000108530 Tbc1d8Q9Z1A9 1134 aa17.47■□□□□ 0.39
Nup88-202ENSMUST00000108530 Lipo1J3QME6 396 aa17.46■□□□□ 0.39
Nup88-202ENSMUST00000108530 NapbP28663 298 aa17.46■□□□□ 0.39
Nup88-202ENSMUST00000108530 Agtpbp1Q641K1 1218 aa17.46■□□□□ 0.39
Nup88-202ENSMUST00000108530 Ccdc66Q6NS45 935 aa17.46■□□□□ 0.39
Nup88-202ENSMUST00000108530 Fchsd1Q6PFY1 688 aa17.46■□□□□ 0.39
Nup88-202ENSMUST00000108530 Ncaph2Q8BSP2 607 aa17.46■□□□□ 0.39
Nup88-202ENSMUST00000108530 Olfm5Q8BU90 496 aa17.46■□□□□ 0.39
Nup88-202ENSMUST00000108530 NsmfQ99NF2 532 aa17.46■□□□□ 0.39
Nup88-202ENSMUST00000108530 Frmd7A2AD83 703 aa17.46■□□□□ 0.39
Nup88-202ENSMUST00000108530 Vmn2r23E9PXI5 849 aa17.46■□□□□ 0.39
Nup88-202ENSMUST00000108530 Strip1Q8C079 837 aa17.46■□□□□ 0.39
Nup88-202ENSMUST00000108530 Tuft1O08970 390 aa17.45■□□□□ 0.38
Nup88-202ENSMUST00000108530 PnnO35691 725 aaKnown RBP17.45■□□□□ 0.38
Nup88-202ENSMUST00000108530 Dynll1P63168 89 aa17.45■□□□□ 0.38
Nup88-202ENSMUST00000108530 Jdp2P97875 163 aa17.45■□□□□ 0.38
Nup88-202ENSMUST00000108530 Cep55Q8BT07 462 aa17.45■□□□□ 0.38
Nup88-202ENSMUST00000108530 Dnttip2Q8R2M2 758 aaKnown RBP17.45■□□□□ 0.38
Nup88-202ENSMUST00000108530 Ccar2Q8VDP4 922 aaKnown RBP17.45■□□□□ 0.38
Nup88-202ENSMUST00000108530 BrapQ99MP8 591 aa17.45■□□□□ 0.38
Nup88-202ENSMUST00000108530 ZwintQ9CQU5 252 aa17.45■□□□□ 0.38
Nup88-202ENSMUST00000108530 Pet2A2AHY8 747 aa17.44■□□□□ 0.38
Nup88-202ENSMUST00000108530 Gm9992B2RWK3 458 aa17.44■□□□□ 0.38
Nup88-202ENSMUST00000108530 Myl10Q62082 202 aa17.44■□□□□ 0.38
Nup88-202ENSMUST00000108530 Unc93aQ710D3 458 aa17.44■□□□□ 0.38
Nup88-202ENSMUST00000108530 Tmem59lQ7TNI2 337 aa17.44■□□□□ 0.38
Nup88-202ENSMUST00000108530 Tmx3Q8BXZ1 456 aa17.44■□□□□ 0.38
Nup88-202ENSMUST00000108530 Fsd2Q8BZ52 692 aa17.44■□□□□ 0.38
Nup88-202ENSMUST00000108530 Zfp113Q8C689 439 aa17.44■□□□□ 0.38
Nup88-202ENSMUST00000108530 Naa30Q8CES0 364 aa17.44■□□□□ 0.38
Nup88-202ENSMUST00000108530 Cep57l1Q8VDS7 400 aa17.44■□□□□ 0.38
Nup88-202ENSMUST00000108530 St5Q924W7 1134 aa17.44■□□□□ 0.38
Nup88-202ENSMUST00000108530 Zbtb43Q9DAI4 467 aa17.44■□□□□ 0.38
Nup88-202ENSMUST00000108530 Myh2G3UW82 1942 aa17.44■□□□□ 0.38
Nup88-202ENSMUST00000108530 A0A1W2P7S8 802 aa17.44■□□□□ 0.38
Nup88-202ENSMUST00000108530 Gm5592Q3V0A6 857 aa17.44■□□□□ 0.38
Nup88-202ENSMUST00000108530 Cdcp1Q5U462 833 aa17.44■□□□□ 0.38
Nup88-202ENSMUST00000108530 Cdc5lQ6A068 802 aaKnown RBP17.44■□□□□ 0.38
Nup88-202ENSMUST00000108530 Cfap69Q8BH53 942 aa17.44■□□□□ 0.38
Nup88-202ENSMUST00000108530 Alg3Q8K2A8 438 aa17.44■□□□□ 0.38
Nup88-202ENSMUST00000108530 Tubb6Q922F4 447 aa17.44■□□□□ 0.38
Nup88-202ENSMUST00000108530 Heg1E9Q7X6 1337 aa17.43■□□□□ 0.38
Nup88-202ENSMUST00000108530 Cyp3a59D3Z2W7 503 aa17.43■□□□□ 0.38
Nup88-202ENSMUST00000108530 Dok7Q18PE0 504 aa17.43■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 66.2 ms