RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Tmem67Q8BR76 992 aa11.89□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Nek11Q8C0Q4 628 aa11.89□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Lrrfip2Q91WK0 415 aa11.89□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Trmt44Q9D2Q2 713 aa11.89□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Mast3Q3U214 1321 aa11.88□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Bend4P86174 541 aa11.88□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Kif20aP97329 887 aa11.88□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Mb21d2Q8C525 428 aa11.88□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Plekhg6Q8R0J1 787 aa11.88□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Dynll1P63168 89 aa11.88□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Spty2d1Q68FG3 682 aa11.88□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Tnpo1Q8BFY9 898 aaKnown RBP11.88□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Cyp2c68K7N6C2 491 aa11.88□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Tceanc2Q8R2M0 207 aa11.88□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 ParnQ8VDG3 624 aa11.88□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Polr3dQ91WD1 398 aa11.88□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Ak2Q9WTP6 239 aa11.88□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Eddm13E9Q7F5 164 aa11.87□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Olfm5Q8BU90 496 aa11.87□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Camkk2Q8C078 588 aa11.87□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Egfem1Q8C088 590 aa11.87□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Pde3aQ9Z0X4 1141 aa11.87□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Rabep1O35551 862 aa11.87□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Slc4a4O88343 1079 aa11.87□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Kank4Q6P9J5 1016 aa11.87□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Nme8Q715T0 586 aa11.87□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Pold4Q9CWP8 107 aa11.87□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 F2rP30558 430 aa11.87□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Mrps5Q99N87 432 aaKnown RBP11.87□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Map3k12Q60700 888 aa11.86□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Pcdhb5Q91XZ5 792 aa11.86□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Ripk4Q9ERK0 786 aa11.86□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Ugt1a5B2RT14 529 aa11.86□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Hspd1P63038 573 aaKnown RBP11.86□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Myl6bQ8CI43 207 aa11.86□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Pes1Q9EQ61 584 aaKnown RBP11.86□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Pcdhb9E9Q5G2 828 aa11.85□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Cyp2d9P11714 504 aa11.85□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Tnni2P13412 182 aa11.85□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Flt1P35969 1333 aa11.85□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Znf692Q3U381 531 aa11.85□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Carmil3Q3UFQ8 1375 aa11.85□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Tmem179Q8BHH9 233 aa11.85□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 StrbpQ91WM1 672 aaKnown RBP11.85□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Hps4Q99KG7 671 aa11.85□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Rad50P70388 1312 aa11.85□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Usp17lbE9Q9U0 468 aa11.85□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Prl7a2O54831 253 aa11.85□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 NapbP28663 298 aa11.85□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Rnf20Q5DTM8 973 aa11.85□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Ankrd13aQ80UP5 588 aa11.85□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Ccdc39Q9D5Y1 937 aa11.85□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Kif22Q3V300 660 aa11.85□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Ddx31Q6NZQ2 687 aaKnown RBP11.85□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Bmp2kQ91Z96 1138 aa11.85□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Rai14Q9EP71 979 aaKnown RBP11.85□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Col3a1P08121 1464 aa11.85□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Gm3893E9Q1I1 302 aa11.84□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Ptrh1Q8BW00 204 aa11.84□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Dnai1Q8C0M8 701 aa11.84□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 FktnQ8R507 461 aa11.84□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 SnrkQ8VDU5 748 aa11.84□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Col4a5Q63ZW6 1691 aa11.84□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Rfx1P48377 963 aa11.84□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Gpr162Q3UN16 588 aa11.84□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Pdzrn3Q69ZS0 1063 aa11.84□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Zkscan16A2ALW2 728 aa11.84□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Siah1aP61092 282 aa11.84□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Krt40Q6IFX3 439 aa11.84□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Rbm43Q99J64 343 aa11.84□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 VirmaA2AIV2 1811 aaKnown RBP11.84□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Gjd4Q8BSD4 364 aa11.83□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Ces1dQ8VCT4 565 aa11.83□□□□□ -0.51
Ccdc38-201ENSMUST00000092215 Irgm2A0A140LIF8 407 aa11.83□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Stn1Q8K2X3 378 aa11.83□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Myh4Q5SX39 1939 aa11.83□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 XpcP51612 930 aa11.83□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Insm1Q63ZV0 521 aa11.83□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 AaasP58742 546 aa11.82□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Spata18Q0P557 537 aa11.82□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Acap3Q6NXL5 833 aa11.82□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Cfap44E9Q5M6 1843 aa11.82□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 GabreA2AMW3 916 aa11.82□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Prss40A6H6T1 365 aa11.82□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Akap2O54931 893 aa11.82□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Ehmt1Q5DW34 1296 aa11.82□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Cxcl11Q9JHH5 100 aa11.82□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 RabggtaQ9JHK4 567 aa11.82□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 StrcQ8VIM6 1809 aa11.82□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Znf326O88291 580 aa11.82□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Cacnb3P54285 484 aa11.82□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Gjb2Q00977 226 aa11.82□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Slx4ipQ9D7Y9 413 aa11.82□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Znf609Q8BZ47 1413 aa11.81□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Ifi207E9Q3L4 978 aa11.81□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Scaf8Q6DID3 1268 aa11.81□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Adam1bQ8R534 806 aa11.81□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Sil1Q9EPK6 465 aa11.81□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 Nup98Q6PFD9 1816 aaKnown RBP11.81□□□□□ -0.52
Ccdc38-201ENSMUST00000092215 UtrnE9Q6R7 3430 aa11.81□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 26.8 ms