RNA–Protein interactions for RNA: ENSMUST00000065304.11

Rtn3-202, Transcript of Reticulon-3, mousemouse

TSL 1 (best) BASIC

Gene Rtn3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-202ENSMUST00000065304 Rtel1Q0VGM9 1203 aa12.58□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Cers3Q1A3B0 383 aa12.58□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Zkscan5Q9Z1D8 819 aa12.58□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Ccdc40Q8BI79 1192 aa12.58□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Trim35Q8C006 501 aa12.58□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Smc5Q8CG46 1101 aaKnown RBP12.58□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Ribc1Q9D0B8 379 aa12.58□□□□□ -0.4
Rtn3-202ENSMUST00000065304 EsrrgP62509 458 aa12.57□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Zbtb21E9Q444 1094 aa12.57□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Slc12a2P55012 1205 aa12.57□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Ncf1Q09014 390 aa12.57□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Ccdc162pQ0VG85 912 aa12.57□□□□□ -0.4
Rtn3-202ENSMUST00000065304 ArsiQ32KI9 573 aa12.57□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Ift122Q6NWV3 1182 aa12.57□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Ror2Q9Z138 944 aa12.57□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Efcab5A0JP43 1406 aa12.57□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Slc1a4O35874 532 aa12.57□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Calm1P0DP26 149 aaKnown RBP12.57□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Calm2P0DP27 149 aaKnown RBP12.57□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Calm3P0DP28 149 aaKnown RBP12.57□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Gm4981Q3ULJ8 291 aa12.57□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Rab11fip4Q8BQP8 635 aa12.57□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Ttc1Q91Z38 292 aa12.57□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Spocd1B1ASB6 936 aa12.57□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Krt18P05784 423 aa12.57□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Tyro3P55144 880 aa12.57□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Sptlc2P97363 560 aaKnown RBP12.57□□□□□ -0.4
Rtn3-202ENSMUST00000065304 GabpaQ00422 454 aa12.57□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Nop9Q8BMC4 636 aaKnown RBP12.57□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Trim42Q9D2H5 723 aa12.57□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Cecr2E9Q2Z1 1453 aa12.57□□□□□ -0.4
Rtn3-202ENSMUST00000065304 U2af2P26369 475 aaKnown RBP12.56□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Mcm10Q0VBD2 885 aa12.56□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Tpd52Q62393 224 aa12.56□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Kdm1aQ6ZQ88 853 aa12.56□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Cabs1Q8C633 391 aa12.56□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Nop2Q922K7 793 aaKnown RBP12.56□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Thap12Q9CUX1 758 aa12.56□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Sycp2Q9CUU3 1500 aa12.56□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Ppp2r5eQ61151 467 aa12.56□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Tmx1Q8VBT0 278 aa12.56□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Trim16Q99PP9 556 aa12.56□□□□□ -0.4
Rtn3-202ENSMUST00000065304 LrgukQ9D5S7 820 aa12.56□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Ankfy1Q810B6 1169 aa12.56□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Zbtb41Q811F1 908 aa12.56□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Ppfia1B2RXQ2 1266 aa12.56□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Tmtc1Q3UV71 942 aa12.56□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Ltv1Q6NSQ7 470 aaKnown RBP12.56□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Fam228aQ8CDW1 299 aa12.56□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Ccdc105Q9D4K7 499 aa12.56□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Ccdc70Q9D9B0 223 aa12.56□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Erich2E9Q1A6 463 aa12.55□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Jmjd4Q8BFT6 427 aa12.55□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Tsr2Q8C8T8 191 aa12.55□□□□□ -0.4
Rtn3-202ENSMUST00000065304 PalmdQ9JHU2 551 aa12.55□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Pole3Q9JKP7 145 aa12.55□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Phlpp2Q8BXA7 1320 aa12.55□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Cetn3O35648 167 aa12.55□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Ms4a1P19437 291 aa12.55□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Srek1ip1Q4V9W2 153 aa12.55□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Znf18Q810A1 556 aa12.55□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Rsad2Q8CBB9 362 aa12.55□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Nrbf2Q8VCQ3 287 aa12.55□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Tex9Q9D845 387 aa12.55□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Pik3r4Q8VD65 1358 aa12.55□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Palm3A2TJV2 734 aa12.55□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Gm10110D3Z5M2 615 aa12.55□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Retreg2Q6NS82 541 aa12.55□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Csrnp2Q8BGQ2 534 aa12.55□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Mtrf1lQ8BJU9 373 aa12.55□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Hirip3Q8BLH7 601 aa12.55□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Krt71Q9R0H5 524 aa12.55□□□□□ -0.4
Rtn3-202ENSMUST00000065304 CltaO08585 235 aa12.55□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Gm5168Q4KL04 211 aa12.55□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Tsr1Q5SWD9 803 aa12.55□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Exoc3Q6KAR6 755 aa12.55□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Gm21985Q6P6P5 1106 aa12.55□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Snd1Q78PY7 910 aaKnown RBP12.54□□□□□ -0.4
Rtn3-202ENSMUST00000065304 SyncQ9EPM5 470 aa12.54□□□□□ -0.4
Rtn3-202ENSMUST00000065304 ParvgQ9ERD8 331 aa12.54□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Fmnl1Q9JL26 1094 aa12.54□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Ice2Q3UZ18 988 aaKnown RBP12.54□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Gnat3Q3V3I2 354 aa12.54□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Anapc5Q8BTZ4 740 aa12.54□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Calml3Q9D6P8 149 aa12.54□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Plekho1Q9JIY0 408 aa12.54□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Dbn1Q9QXS6 706 aa12.54□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Wdr46Q9Z0H1 622 aaKnown RBP12.54□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Ttc21bQ0HA38 1315 aa12.54□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Zfp651E9PZ11 729 aa12.54□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Rap1gds1E9Q912 607 aa12.54□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Pde1bQ01065 535 aa12.54□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Msl1Q6PDM1 616 aa12.54□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Nkiras1Q8CEC5 192 aa12.54□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Pck1Q9Z2V4 622 aa12.54□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Sos2Q02384 1333 aa12.54□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Larp1bA0A0A6YXJ7 370 aaKnown RBP12.54□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Zscan18E9PUD6 809 aa12.54□□□□□ -0.4
Rtn3-202ENSMUST00000065304 MarcksP26645 309 aaKnown RBP12.54□□□□□ -0.4
Rtn3-202ENSMUST00000065304 Ccdc33Q3ULW6 985 aa12.54□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 38 ms