RNA–Protein interactions for RNA: ENSMUST00000050178.12

Ccdc60-201, Transcript of Coiled-coil domain-containing protein 60, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc60, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-201ENSMUST00000050178 Ccdc162pQ0VG85 912 aa9.41□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Lmbrd2Q8C561 694 aa9.41□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Ambra1A2AH22 1300 aa9.41□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Sema6bO54951 886 aa9.41□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Cyp7a1Q64505 503 aa9.41□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Bap1Q99PU7 728 aa9.41□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Sept12Q9D451 317 aa9.41□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Vmn2r23E9PXI5 849 aa9.4□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Gm29094F6Q785 221 aa9.4□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Limch1Q3UH68 1057 aa9.4□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Znf496Q5SXI5 585 aa9.4□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Pdcl2Q78Y63 240 aa9.4□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 MthfsQ9D110 203 aa9.4□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Stag1Q9D3E6 1258 aa9.4□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 FliiQ9JJ28 1271 aa9.4□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Lgr5Q9Z1P4 907 aa9.4□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Aox3G3X982 1335 aa9.4□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Tcof1O08784 1320 aaKnown RBP9.4□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Znf638Q61464 1960 aaKnown RBP9.4□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Dhx16G3X8X0 1044 aaKnown RBP9.4□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Prkag3Q8BGM7 489 aa9.4□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 ImmtQ8CAQ8 757 aaKnown RBP9.4□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 ZwintQ9CQU5 252 aa9.4□□□□□ -0.9
Ccdc60-201ENSMUST00000050178 Bcorl1A2AQH4 1781 aa9.4□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Zscan25B2RX31 543 aa9.4□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Syce3B5KM66 88 aa9.4□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Anxa1P10107 346 aaKnown RBP9.4□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Slc44a1Q6X893 653 aa9.4□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Slitrk3Q810B9 980 aa9.4□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Snw1Q9CSN1 536 aaKnown RBP9.4□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Thsd7bQ6P4U0 1607 aa9.4□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Mast3Q3U214 1321 aa9.39□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Cyp2c23E9Q5K4 494 aa9.39□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Speer4dL7N216 212 aa9.39□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Krt40Q6IFX3 439 aa9.39□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Ano1Q8BHY3 960 aa9.39□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Mrpl44Q9CY73 333 aaKnown RBP9.39□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Psrc1Q9D0P7 329 aa9.39□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Sh3bp5Q9Z131 463 aa9.39□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Gm13023A2A8N2 498 aa9.39□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Hmx1O70218 332 aa9.39□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Nxf7Q80SZ6 620 aaKnown RBP9.39□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Rab3gap1Q80UJ7 981 aa9.39□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Bend4P86174 541 aa9.39□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Igflr1Q3U4N7 345 aa9.39□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Lrrc43Q3V0L5 667 aa9.39□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Sox30Q8CGW4 782 aa9.39□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Plcd3Q8K2J0 785 aa9.39□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Tceanc2Q8R2M0 207 aa9.39□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Naa16Q9DBB4 864 aa9.39□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 1700113H08RikE9Q9Q5 327 aa9.38□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Q3TYL0 343 aa9.38□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Paf1Q8K2T8 535 aa9.38□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Klc3Q91W40 508 aa9.38□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Cdc45Q9Z1X9 566 aa9.38□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Dock2Q8C3J5 1828 aa9.38□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Kiaa0753Q6A000 959 aa9.38□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Ccdc66Q6NS45 935 aa9.38□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Tbc1d31Q6NXY1 996 aa9.38□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Nup88Q8CEC0 753 aaKnown RBP9.38□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Mtmr3Q8K296 1196 aa9.38□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Dnttip2Q8R2M2 758 aaKnown RBP9.38□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 NenfQ9CQ45 171 aa9.38□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Aox4Q3TYQ9 1336 aa9.38□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Gnat2P50149 354 aa9.38□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 PcQ05920 1178 aa9.38□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Usp28Q5I043 1051 aa9.38□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Nol10Q5RJG1 687 aaKnown RBP9.38□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Slf2Q6P9P0 1278 aa9.38□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Miga2Q8BK03 593 aa9.38□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Zc3h4Q6ZPZ3 1304 aaKnown RBP9.37□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Arhgap33Q80YF9 1305 aa9.37□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 1700029H14RikE9PY36 240 aa9.37□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Pde6aP27664 859 aa9.37□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Trim34aQ99PP6 485 aa9.37□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Esyt2Q3TZZ7 845 aa9.37□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 4933416C03RikQ3V063 378 aa9.37□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Rufy2Q8R4C2 606 aa9.37□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Wdr33Q8K4P0 1330 aaKnown RBP9.37□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 U2af2P26369 475 aaKnown RBP9.36□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Sec23aQ01405 765 aa9.36□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Cdca8Q8BHX3 289 aa9.36□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Tmem67Q8BR76 992 aa9.36□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Tpcn2Q8BWC0 731 aa9.36□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Lrit1Q8K099 624 aa9.36□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Q8K2W9 541 aa9.36□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 PdcQ9QW08 244 aa9.36□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Col2a1P28481 1487 aa9.36□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Ankrd63A2ARS0 390 aa9.36□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Gm20425E9Q035 978 aaKnown RBP9.36□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 SrprbP47758 269 aa9.36□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Pcsk7Q61139 770 aa9.36□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Anp32cQ64G17 123 aa9.36□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Fez1Q8K0X8 392 aa9.36□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 McamQ8R2Y2 648 aaKnown RBP9.36□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 EvplQ9D952 2035 aa9.36□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Cd3dP04235 173 aa9.36□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Hps6Q8BLY7 805 aa9.36□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 Chmp4cQ9D7F7 232 aa9.36□□□□□ -0.91
Ccdc60-201ENSMUST00000050178 1700018B08RikQ9DA83 213 aa9.36□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms