RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Rps8P62242 208 aaKnown RBP13.64□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Phldb2Q8K1N2 1249 aa13.64□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Luc7lQ9CYI4 371 aaKnown RBP13.64□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Ttc41Q692V3 1318 aa13.64□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Olr1Q9EQ09 363 aa13.64□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Rcan3Q9JKK0 239 aa13.64□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Atp7bQ64446 1462 aa13.64□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Palm3A2TJV2 734 aa13.64□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Prr16A3KMN5 304 aa13.64□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Map3k12Q60700 888 aa13.64□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Slc4a8Q8JZR6 1089 aa13.64□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Bloc1s4Q8VED2 215 aa13.64□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Pcdhb22Q91XZ8 794 aa13.64□□□□□ -0.23
Pcif1-201ENSMUST00000041643 PtprmP28828 1452 aa13.63□□□□□ -0.23
Pcif1-201ENSMUST00000041643 MarcksP26645 309 aaKnown RBP13.63□□□□□ -0.23
Pcif1-201ENSMUST00000041643 MycbpapQ5SUV2 932 aa13.63□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Pdcl3Q8BVF2 240 aa13.63□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Tsr2Q8C8T8 191 aa13.63□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Znf131Q8K3J5 619 aa13.63□□□□□ -0.23
Pcif1-201ENSMUST00000041643 4931400O07RikQ9D4M5 137 aa13.63□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Ttll12Q3UDE2 639 aa13.63□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Phf14Q9D4H9 881 aa13.63□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Ccdc112A0AUP1 442 aa13.63□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Cavin1O54724 392 aa13.63□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Cep112Q5PR68 954 aa13.63□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Cnga2Q62398 664 aa13.63□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Ift122Q6NWV3 1182 aa13.63□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Il15P48346 162 aa13.63□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Nat10Q8K224 1024 aaKnown RBP13.63□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Ccdc82Q6PG04 518 aa13.62□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Acnat2Q8BGG9 420 aa13.62□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Snapc4Q8BP86 1333 aa13.62□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Tmco3Q8BH01 678 aa13.62□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Rufy1Q8BIJ7 712 aa13.62□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Mylk2Q8VCR8 613 aa13.62□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Abca17E9PX95 1733 aa13.62□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Myl10Q62082 202 aa13.62□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Ybx3Q9JKB3 361 aaKnown RBP13.62□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Mybl2P48972 704 aa13.62□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Baiap2l1Q9DBJ3 514 aa13.62□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Eid1Q9DCR4 169 aa13.62□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Adarb2Q9JI20 745 aa13.62□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Tecpr2Q3UH45 1423 aa13.61□□□□□ -0.23
Pcif1-201ENSMUST00000041643 MaddQ80U28 1577 aa13.61□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Bin2D3Z6Q9 489 aa13.61□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Nfxl1E9Q8I7 918 aaKnown RBP13.61□□□□□ -0.23
Pcif1-201ENSMUST00000041643 SnrkQ8VDU5 748 aa13.61□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Ssr1Q9CY50 286 aaKnown RBP13.61□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Nol7Q9D7Z3 254 aaKnown RBP13.61□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Mrps25Q9D125 171 aaKnown RBP13.61□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Gm30191A0A0U1RNT7 187 aa13.61□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Olfr247E9PVJ7 320 aa13.61□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Olfr819K7N727 320 aa13.61□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Mx1P09922 631 aa13.61□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Smarcc2Q6PDG5 1213 aa13.61□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Sh3d21Q7TSG5 549 aa13.61□□□□□ -0.23
Pcif1-201ENSMUST00000041643 SltmQ8CH25 1031 aaKnown RBP13.61□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Ssfa2Q922B9 1252 aa13.61□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Dnaaf4Q8R368 420 aa13.6□□□□□ -0.23
Pcif1-201ENSMUST00000041643 SetQ9EQU5 289 aaKnown RBP13.6□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Ankrd1Q9CR42 319 aa13.6□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Cyp27a1Q9DBG1 533 aa13.6□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Aox4Q3TYQ9 1336 aa13.6□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Sptlc2P97363 560 aaKnown RBP13.6□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Cdca8Q8BHX3 289 aa13.6□□□□□ -0.23
Pcif1-201ENSMUST00000041643 AdnpQ9Z103 1108 aaKnown RBP13.6□□□□□ -0.23
Pcif1-201ENSMUST00000041643 4930407I10RikD3Z5T8 1512 aa13.6□□□□□ -0.23
Pcif1-201ENSMUST00000041643 NfkbibQ60778 359 aa13.6□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Ift57Q8BXG3 429 aa13.6□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Themis2Q91YX0 663 aa13.6□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Lonrf3Q9D4H7 753 aa13.6□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Eif6O55135 245 aa13.59□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Pkd2l2Q9JLG4 621 aa13.59□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Ubash3aQ3V3E1 624 aa13.59□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Sun3Q5SS91 320 aa13.59□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Col20a1Q923P0 1320 aa13.59□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Usp25P57080 1055 aa13.59□□□□□ -0.23
Pcif1-201ENSMUST00000041643 VrtnQ3SYK4 740 aa13.59□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Nyap1Q6PFX7 833 aa13.59□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Matr3Q8K310 846 aaKnown RBP13.59□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Uhrf1bp1B2KF50 1429 aa13.59□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Zrsr2Q62377 462 aaKnown RBP13.59□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Ehbp1l1Q99MS7 1716 aa13.59□□□□□ -0.23
Pcif1-201ENSMUST00000041643 2310002L09RikQ9D7L5 217 aa13.59□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Hspa1lP16627 641 aa13.58□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Gpr182P43142 395 aa13.58□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Sp4Q62445 782 aa13.58□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Krt79Q8VED5 531 aa13.58□□□□□ -0.23
Pcif1-201ENSMUST00000041643 Ciao1Q99KN2 339 aa13.58□□□□□ -0.23
Pcif1-201ENSMUST00000041643 TrdnE9Q9K5 693 aa13.58□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Ssrp1Q08943 708 aaKnown RBP13.58□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Smtnl1Q99LM3 459 aa13.58□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Adamts7Q68SA9 1657 aa13.58□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Zkscan7E9PVW1 718 aa13.58□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Adcy5P84309 1262 aa13.58□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Esyt1Q3U7R1 1092 aaKnown RBP13.58□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Mdh1bQ5F204 500 aa13.58□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Asap2Q7SIG6 958 aa13.58□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Ddx10Q80Y44 875 aaKnown RBP13.58□□□□□ -0.24
Pcif1-201ENSMUST00000041643 Frmd3Q8BHD4 595 aa13.58□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms