RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Snx25Q3ZT31 840 aa11.08□□□□□ -0.63
Syne1-201ENSMUST00000041639 SdsQ8VBT2 327 aa11.08□□□□□ -0.63
Syne1-201ENSMUST00000041639 Ubac1Q8VDI7 409 aa11.08□□□□□ -0.63
Syne1-201ENSMUST00000041639 Six6os1Q9CTN5 574 aa11.08□□□□□ -0.63
Syne1-201ENSMUST00000041639 Dydc2Q9D3X8 139 aa11.08□□□□□ -0.63
Syne1-201ENSMUST00000041639 Akap8Q9DBR0 687 aaKnown RBP11.08□□□□□ -0.63
Syne1-201ENSMUST00000041639 Plekhg2Q6KAU7 1340 aa11.08□□□□□ -0.64
Syne1-201ENSMUST00000041639 Epb41l2O70318 988 aaKnown RBP11.08□□□□□ -0.64
Syne1-201ENSMUST00000041639 Eme2Q56A04 373 aa11.08□□□□□ -0.64
Syne1-201ENSMUST00000041639 Tsga10Q6NY15 697 aa11.08□□□□□ -0.64
Syne1-201ENSMUST00000041639 Rapgef1Q3UHC1 1224 aa11.08□□□□□ -0.64
Syne1-201ENSMUST00000041639 Vps41Q5KU39 853 aa11.08□□□□□ -0.64
Syne1-201ENSMUST00000041639 Tcp11l1Q8BTG3 509 aa11.08□□□□□ -0.64
Syne1-201ENSMUST00000041639 Znf428Q8C1M2 176 aa11.08□□□□□ -0.64
Syne1-201ENSMUST00000041639 St5Q924W7 1134 aa11.08□□□□□ -0.64
Syne1-201ENSMUST00000041639 Mtmr7Q9Z2C9 660 aa11.08□□□□□ -0.64
Syne1-201ENSMUST00000041639 Dcaf17Q3TUL7 519 aa11.08□□□□□ -0.64
Syne1-201ENSMUST00000041639 Kank4Q6P9J5 1016 aa11.08□□□□□ -0.64
Syne1-201ENSMUST00000041639 SympkQ80X82 1284 aa11.08□□□□□ -0.64
Syne1-201ENSMUST00000041639 Taok3Q8BYC6 898 aa11.08□□□□□ -0.64
Syne1-201ENSMUST00000041639 Sde2Q8K1J5 448 aaKnown RBP11.08□□□□□ -0.64
Syne1-201ENSMUST00000041639 Ppp6r3Q922D4 844 aa11.08□□□□□ -0.64
Syne1-201ENSMUST00000041639 Xrcc4Q924T3 326 aa11.08□□□□□ -0.64
Syne1-201ENSMUST00000041639 Syce1Q9D495 329 aa11.08□□□□□ -0.64
Syne1-201ENSMUST00000041639 TnksQ6PFX9 1320 aa11.08□□□□□ -0.64
Syne1-201ENSMUST00000041639 Gm30191A0A0U1RNT7 187 aa11.08□□□□□ -0.64
Syne1-201ENSMUST00000041639 TrdnE9Q9K5 693 aa11.08□□□□□ -0.64
Syne1-201ENSMUST00000041639 Specc1lQ2KN98 1118 aaKnown RBP11.08□□□□□ -0.64
Syne1-201ENSMUST00000041639 Myl10Q62082 202 aa11.08□□□□□ -0.64
Syne1-201ENSMUST00000041639 Exoc3Q6KAR6 755 aa11.08□□□□□ -0.64
Syne1-201ENSMUST00000041639 Stmn4P63042 189 aa11.08□□□□□ -0.64
Syne1-201ENSMUST00000041639 Snd1Q78PY7 910 aaKnown RBP11.08□□□□□ -0.64
Syne1-201ENSMUST00000041639 Polr2dQ9D7M8 142 aaKnown RBP11.08□□□□□ -0.64
Syne1-201ENSMUST00000041639 Ccdc89Q9DA73 370 aa11.08□□□□□ -0.64
Syne1-201ENSMUST00000041639 Sdad1Q80UZ2 687 aaKnown RBP11.07□□□□□ -0.64
Syne1-201ENSMUST00000041639 Depdc1bQ8BH88 529 aa11.07□□□□□ -0.64
Syne1-201ENSMUST00000041639 Elf2Q9JHC9 593 aa11.07□□□□□ -0.64
Syne1-201ENSMUST00000041639 Tmod2Q9JKK7 351 aa11.07□□□□□ -0.64
Syne1-201ENSMUST00000041639 Fancd2Q80V62 1450 aa11.07□□□□□ -0.64
Syne1-201ENSMUST00000041639 1700018F24RikB2RW27 314 aa11.07□□□□□ -0.64
Syne1-201ENSMUST00000041639 Gm44503E9PYU5 387 aa11.07□□□□□ -0.64
Syne1-201ENSMUST00000041639 Gm29094F6Q785 221 aa11.07□□□□□ -0.64
Syne1-201ENSMUST00000041639 Wdr62Q3U3T8 1523 aa11.07□□□□□ -0.64
Syne1-201ENSMUST00000041639 Gigyf2Q6Y7W8 1291 aaKnown RBP11.07□□□□□ -0.64
Syne1-201ENSMUST00000041639 SltmQ8CH25 1031 aaKnown RBP11.07□□□□□ -0.64
Syne1-201ENSMUST00000041639 Gbp7Q91Z40 638 aa11.07□□□□□ -0.64
Syne1-201ENSMUST00000041639 Lonp2Q9DBN5 852 aa11.07□□□□□ -0.64
Syne1-201ENSMUST00000041639 Irs4Q9Z0Y7 1216 aa11.07□□□□□ -0.64
Syne1-201ENSMUST00000041639 Gna11P21278 359 aa11.07□□□□□ -0.64
Syne1-201ENSMUST00000041639 Tex2Q6ZPJ0 1128 aaKnown RBP11.07□□□□□ -0.64
Syne1-201ENSMUST00000041639 Mrpl12Q9DB15 201 aaKnown RBP11.07□□□□□ -0.64
Syne1-201ENSMUST00000041639 Irx4Q9QY61 515 aa11.07□□□□□ -0.64
Syne1-201ENSMUST00000041639 Palm3A2TJV2 734 aa11.07□□□□□ -0.64
Syne1-201ENSMUST00000041639 Mindy4Q3UQI9 744 aa11.07□□□□□ -0.64
Syne1-201ENSMUST00000041639 Kdm4cQ8VCD7 1054 aa11.07□□□□□ -0.64
Syne1-201ENSMUST00000041639 Kcnh3Q9WVJ0 1095 aa11.07□□□□□ -0.64
Syne1-201ENSMUST00000041639 Trappc8E9PWG2 1437 aa11.07□□□□□ -0.64
Syne1-201ENSMUST00000041639 Wdr7Q920I9 1489 aa11.07□□□□□ -0.64
Syne1-201ENSMUST00000041639 Caprin2Q05A80 1031 aaKnown RBP11.06□□□□□ -0.64
Syne1-201ENSMUST00000041639 Arfgap2Q99K28 520 aa11.06□□□□□ -0.64
Syne1-201ENSMUST00000041639 Stx17Q9D0I4 301 aa11.06□□□□□ -0.64
Syne1-201ENSMUST00000041639 Pdcd6ipQ9WU78 869 aaKnown RBP11.06□□□□□ -0.64
Syne1-201ENSMUST00000041639 Mast3Q3U214 1321 aa11.06□□□□□ -0.64
Syne1-201ENSMUST00000041639 Gsta4P24472 222 aa11.06□□□□□ -0.64
Syne1-201ENSMUST00000041639 Wdr93Q402B2 695 aa11.06□□□□□ -0.64
Syne1-201ENSMUST00000041639 Fam204aQ8C6C7 236 aa11.06□□□□□ -0.64
Syne1-201ENSMUST00000041639 Plcd3Q8K2J0 785 aa11.06□□□□□ -0.64
Syne1-201ENSMUST00000041639 Nfil3O08750 462 aa11.06□□□□□ -0.64
Syne1-201ENSMUST00000041639 Fermt1P59113 677 aa11.06□□□□□ -0.64
Syne1-201ENSMUST00000041639 Vgll3P85442 326 aa11.06□□□□□ -0.64
Syne1-201ENSMUST00000041639 Gbp8Q2V6D6 525 aa11.06□□□□□ -0.64
Syne1-201ENSMUST00000041639 Hook2Q7TMK6 716 aa11.06□□□□□ -0.64
Syne1-201ENSMUST00000041639 Gbp2Q9Z0E6 589 aa11.06□□□□□ -0.64
Syne1-201ENSMUST00000041639 Mug2P28666 1451 aa11.06□□□□□ -0.64
Syne1-201ENSMUST00000041639 Asxl2Q8BZ32 1370 aa11.06□□□□□ -0.64
Syne1-201ENSMUST00000041639 Bin2D3Z6Q9 489 aa11.06□□□□□ -0.64
Syne1-201ENSMUST00000041639 Tubb5P99024 444 aaKnown RBP11.06□□□□□ -0.64
Syne1-201ENSMUST00000041639 Kif17Q99PW8 1038 aa11.06□□□□□ -0.64
Syne1-201ENSMUST00000041639 Lonrf3Q9D4H7 753 aa11.06□□□□□ -0.64
Syne1-201ENSMUST00000041639 Gm5624F6ZZG8 207 aa11.06□□□□□ -0.64
Syne1-201ENSMUST00000041639 Clec11aO88200 328 aa11.06□□□□□ -0.64
Syne1-201ENSMUST00000041639 Mdh1bQ5F204 500 aa11.06□□□□□ -0.64
Syne1-201ENSMUST00000041639 ThemisQ8BGW0 636 aa11.06□□□□□ -0.64
Syne1-201ENSMUST00000041639 HhatQ8BMT9 499 aa11.06□□□□□ -0.64
Syne1-201ENSMUST00000041639 Olfm5Q8BU90 496 aa11.06□□□□□ -0.64
Syne1-201ENSMUST00000041639 Gucy1a3Q9ERL9 691 aa11.06□□□□□ -0.64
Syne1-201ENSMUST00000041639 Gm5934D3Z4U6 212 aa11.06□□□□□ -0.64
Syne1-201ENSMUST00000041639 Cbfa2t2O70374 594 aa11.06□□□□□ -0.64
Syne1-201ENSMUST00000041639 Eef1dP57776 281 aaKnown RBP11.06□□□□□ -0.64
Syne1-201ENSMUST00000041639 Gm28047Q3US59 414 aa11.06□□□□□ -0.64
Syne1-201ENSMUST00000041639 Trak2Q6P9N8 913 aa11.06□□□□□ -0.64
Syne1-201ENSMUST00000041639 Zkscan8Q8BSL0 588 aa11.06□□□□□ -0.64
Syne1-201ENSMUST00000041639 Kdm2bQ6P1G2 1309 aa11.06□□□□□ -0.64
Syne1-201ENSMUST00000041639 Map7d1A2AJI0 846 aa11.05□□□□□ -0.64
Syne1-201ENSMUST00000041639 Mtx1P47802 317 aa11.05□□□□□ -0.64
Syne1-201ENSMUST00000041639 PicalmQ7M6Y3 660 aaKnown RBP11.05□□□□□ -0.64
Syne1-201ENSMUST00000041639 Ppip5k1A2ARP1 1436 aa11.05□□□□□ -0.64
Syne1-201ENSMUST00000041639 Ankrd35E9Q9D8 996 aa11.05□□□□□ -0.64
Syne1-201ENSMUST00000041639 NapgQ9CWZ7 312 aa11.05□□□□□ -0.64
Syne1-201ENSMUST00000041639 NapaQ9DB05 295 aa11.05□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 42.4 ms