RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Filip1Q9CS72 1211 aa13.98□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Mei1Q9D4I2 1268 aa13.98□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Nek3Q9R0A5 511 aa13.98□□□□□ -0.17
Ufd1-201ENSMUST00000005394 FocadA2AKG8 1798 aa13.98□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Exoc6bA6H5Z3 810 aa13.98□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Gm10471E9Q1C7 252 aa13.98□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Ppfibp2O35711 882 aa13.98□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Rfc1P35601 1131 aa13.98□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Uri1Q3TLD5 531 aa13.98□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Mphosph10Q810V0 681 aaKnown RBP13.98□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Cep89Q9CZX2 791 aa13.98□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Nol7Q9D7Z3 254 aaKnown RBP13.98□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Il1rapl2Q9ERS6 686 aa13.98□□□□□ -0.17
Ufd1-201ENSMUST00000005394 GmnnO88513 206 aa13.97□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Pa2g4P50580 394 aaKnown RBP13.97□□□□□ -0.17
Ufd1-201ENSMUST00000005394 PsdQ5DTT2 1024 aa13.97□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Mctp2Q5RJH2 878 aa13.97□□□□□ -0.17
Ufd1-201ENSMUST00000005394 PsapQ61207 557 aaKnown RBP13.97□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Prkag3Q8BGM7 489 aa13.97□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Srek1Q8BZX4 494 aaKnown RBP13.97□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Tgs1Q923W1 853 aa13.97□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Irgm2A0A140LIF8 407 aa13.96□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Apba2P98084 750 aa13.96□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Efcab8Q8C9R9 203 aa13.96□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Slc26a8Q8R0C3 999 aa13.96□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Ddx27Q921N6 760 aaKnown RBP13.96□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Bicc1Q99MQ1 977 aaKnown RBP13.96□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Iqca1Q9CUL5 857 aa13.96□□□□□ -0.17
Ufd1-201ENSMUST00000005394 Larp1bA0A0A6YXJ7 370 aaKnown RBP13.96□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Rgs9O54828 675 aa13.96□□□□□ -0.18
Ufd1-201ENSMUST00000005394 EmbP21995 330 aa13.96□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Q8CEZ4 452 aa13.96□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Luzp1Q8R4U7 1068 aaKnown RBP13.96□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Kri1Q8VDQ9 704 aaKnown RBP13.96□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Tomm22Q9CPQ3 142 aa13.96□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Yeats4Q9CR11 227 aaKnown RBP13.96□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Dctpp1Q9QY93 170 aa13.96□□□□□ -0.18
Ufd1-201ENSMUST00000005394 CoblQ5NBX1 1337 aaKnown RBP13.95□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Kcnh4A2A5F7 1018 aa13.95□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Rsrc2A2RTL5 376 aaKnown RBP13.95□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Exosc10P56960 887 aaKnown RBP13.95□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Emc10Q3TAS6 258 aa13.95□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Maats1Q8BRC6 783 aa13.95□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Mei4Q8BRM6 389 aa13.95□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Dact1Q8R4A3 778 aa13.95□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Gm43638A0A0J9YU36 694 aa13.94□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Bsdc1Q80Y55 427 aa13.94□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Iqcb1Q8BP00 598 aa13.94□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Ptcd1Q8C2E4 695 aaKnown RBP13.94□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Spata16Q8C636 571 aa13.94□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Brd3Q8K2F0 726 aaKnown RBP13.94□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Vps18Q8R307 973 aa13.94□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Rrs1Q9CYH6 365 aaKnown RBP13.94□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Cwc15Q9JHS9 229 aaKnown RBP13.94□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Dpf1Q9QX66 387 aa13.94□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Fam50bQ9WTJ8 334 aa13.94□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Ddx60E9PZQ1 1711 aa13.94□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Klra1P20937 262 aa13.94□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Grm8P47743 908 aa13.94□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Mkrn3Q60764 544 aa13.94□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Map3k2Q61083 619 aa13.94□□□□□ -0.18
Ufd1-201ENSMUST00000005394 FntaQ61239 377 aa13.94□□□□□ -0.18
Ufd1-201ENSMUST00000005394 VirmaA2AIV2 1811 aaKnown RBP13.94□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Mcm6P97311 821 aa13.93□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Vars2Q3U2A8 1060 aa13.93□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Atp1a3Q6PIC6 1013 aa13.93□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Mtmr6Q8VE11 617 aa13.93□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Smc1aQ9CU62 1233 aaKnown RBP13.93□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Sall1Q9ER74 1322 aa13.93□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Kdm6aO70546 1401 aa13.93□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Btn2a2A4QPC6 514 aa13.92□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Tnnt1O88346 262 aa13.92□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Actn3O88990 900 aaKnown RBP13.92□□□□□ -0.18
Ufd1-201ENSMUST00000005394 LyarQ08288 388 aaKnown RBP13.92□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Washc4Q3UMB9 1173 aa13.92□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Ccdc114Q3UX62 658 aa13.92□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Ctr9Q62018 1173 aaKnown RBP13.92□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Gm21985Q6P6P5 1106 aa13.92□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Rufy2Q8R4C2 606 aa13.92□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Grin2dQ03391 1323 aa13.92□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Atp8b1Q148W0 1251 aa13.92□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Ctnna3Q65CL1 895 aa13.92□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Adcy2Q80TL1 1090 aa13.92□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Cct8l1Q80YT3 562 aa13.92□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Ccer1Q9CQL2 403 aa13.92□□□□□ -0.18
Ufd1-201ENSMUST00000005394 1700017N19RikA0A087WPJ1 469 aa13.91□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Tubb4bP68372 445 aaKnown RBP13.91□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Map3k13Q1HKZ5 959 aa13.91□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Irf9Q61179 399 aa13.91□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Hspa4Q61316 841 aa13.91□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Ifit1Q64282 463 aa13.91□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Wdr3Q8BHB4 942 aaKnown RBP13.91□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Hnrnpul1Q8VDM6 859 aaKnown RBP13.91□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Abcb6Q9DC29 842 aa13.91□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Stxbp4Q9WV89 557 aa13.91□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Gm21680A0A0G2JGR8 267 aa13.91□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Ccng2O08918 344 aa13.91□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Specc1lQ2KN98 1118 aaKnown RBP13.91□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Ezh2Q61188 746 aaKnown RBP13.91□□□□□ -0.18
Ufd1-201ENSMUST00000005394 Ncoa7Q6DFV7 943 aa13.91□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 17.4 ms