RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 CEBPDP49716 269 aaPredicted RBP7.84□□□□□ -1.15
PHGDH-228ENST00000641847 VEGFCP49767 419 aa7.84□□□□□ -1.15
PHGDH-228ENST00000641847 MADCAM1Q13477 382 aa7.84□□□□□ -1.15
PHGDH-228ENST00000641847 FAM189A2Q15884 450 aa7.84□□□□□ -1.15
PHGDH-228ENST00000641847 TAF9Q16594 264 aa7.84□□□□□ -1.15
PHGDH-228ENST00000641847 TUSC1Q2TAM9 212 aa7.84□□□□□ -1.15
PHGDH-228ENST00000641847 MOGAT2Q3SYC2 334 aa7.84□□□□□ -1.15
PHGDH-228ENST00000641847 SPIN3Q5JUX0 258 aa7.84□□□□□ -1.15
PHGDH-228ENST00000641847 NKAPLQ5M9Q1 402 aa7.84□□□□□ -1.15
PHGDH-228ENST00000641847 SFRP4Q6FHJ7 346 aaPredicted RBP7.84□□□□□ -1.15
PHGDH-228ENST00000641847 CNIH2Q6PI25 160 aa7.84□□□□□ -1.15
PHGDH-228ENST00000641847 LINC00596Q86U02 117 aa7.84□□□□□ -1.15
PHGDH-228ENST00000641847 FAM90A1Q86YD7 464 aa7.84□□□□□ -1.15
PHGDH-228ENST00000641847 IZUMO1Q8IYV9 350 aa7.84□□□□□ -1.15
PHGDH-228ENST00000641847 DTX3Q8N9I9 347 aa7.84□□□□□ -1.15
PHGDH-228ENST00000641847 OR4M1Q8NGD0 313 aa7.84□□□□□ -1.15
PHGDH-228ENST00000641847 OR56B1Q8NGI3 324 aa7.84□□□□□ -1.15
PHGDH-228ENST00000641847 PHF21AQ96BD5 680 aa7.84□□□□□ -1.15
PHGDH-228ENST00000641847 S100A16Q96FQ6 103 aaKnown RBP7.84□□□□□ -1.15
PHGDH-228ENST00000641847 DIRAS2Q96HU8 199 aa7.84□□□□□ -1.15
PHGDH-228ENST00000641847 MYOZ1Q9NP98 299 aaPredicted RBP7.84□□□□□ -1.15
PHGDH-228ENST00000641847 ZNF581Q9P0T4 197 aa7.84□□□□□ -1.15
PHGDH-228ENST00000641847 OR14J1Q9UGF5 321 aa7.84□□□□□ -1.15
PHGDH-228ENST00000641847 WIPI2Q9Y4P8 454 aa7.84□□□□□ -1.15
PHGDH-228ENST00000641847 PPIAL4AQ9Y536 164 aa7.84□□□□□ -1.15
PHGDH-228ENST00000641847 TRAV38-1A0A0B4J264 116 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 FAM90A10PA6NDY2 464 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 FAM90A18PA6NE21 464 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 FAM90A16PA6NEW6 464 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 FAM90A20PA6NIJ5 464 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 NKX6-3A6NJ46 265 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 FAM90A8PA6NJQ4 464 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 FAM90A7PA6NKC0 464 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 OR2AT4A6NND4 320 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 FOXI3A8MTJ6 420 aaPredicted RBP7.83□□□□□ -1.16
PHGDH-228ENST00000641847 FAM90A22PA8MWA6 464 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 FAM90A12PA8MX19 464 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 FAM90A5PA8MXJ8 464 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 FAM90A23PA8MXZ1 464 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 LGALS8O00214 317 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 SIRPB1O00241 398 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 SOCS1O15524 211 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 PPIHO43447 177 aaKnown RBP7.83□□□□□ -1.16
PHGDH-228ENST00000641847 VENTXO95231 258 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 HAND1O96004 215 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 TFF1P04155 84 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 CHRM2P08172 466 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 FAM90A15PP0C7V4 464 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 FAM90A13PP0C7W8 464 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 FAM90A14PP0C7W9 464 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 FAM90A24PP0C7X0 464 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 ZNF44P15621 663 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 CDK2P24941 298 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 TNFSF8P32971 234 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 BTG1P62324 171 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 ZNF146Q15072 292 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 PDCD1Q15116 288 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 MICBQ29980 383 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 MPV17LQ2QL34 196 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 TMEM69Q5SWH9 247 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 TEX36Q5VZQ5 186 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 STUMQ69YW2 141 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 SHISA2Q6UWI4 295 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 RTN4RL2Q86UN3 420 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 FAM89BQ8N5H3 189 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 LINC01356Q8N9X3 169 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 CHST4Q8NCG5 386 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 DEFB108BQ8NET1 73 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 OR10R2Q8NGX6 335 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 GLS2Q9UI32 602 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 ZNF222Q9UK12 451 aa7.83□□□□□ -1.16
PHGDH-228ENST00000641847 IGKV1D-17A0A075B6S4 117 aa7.82□□□□□ -1.16
PHGDH-228ENST00000641847 A0A0A6YYH2 397 aa7.82□□□□□ -1.16
PHGDH-228ENST00000641847 ISPDA4D126 451 aa7.82□□□□□ -1.16
PHGDH-228ENST00000641847 A6NJ64 397 aa7.82□□□□□ -1.16
PHGDH-228ENST00000641847 RFPL4AA6NLU0 287 aa7.82□□□□□ -1.16
PHGDH-228ENST00000641847 RFPL4AL1F8VTS6 287 aa7.82□□□□□ -1.16
PHGDH-228ENST00000641847 RAB27BO00194 218 aa7.82□□□□□ -1.16
PHGDH-228ENST00000641847 HSPB6O14558 160 aa7.82□□□□□ -1.16
PHGDH-228ENST00000641847 SH2D1BO14796 132 aa7.82□□□□□ -1.16
PHGDH-228ENST00000641847 DEGS1O15121 323 aa7.82□□□□□ -1.16
PHGDH-228ENST00000641847 XRCC3O43542 346 aa7.82□□□□□ -1.16
PHGDH-228ENST00000641847 PDCD6O75340 191 aa7.82□□□□□ -1.16
PHGDH-228ENST00000641847 OR2H2O95918 312 aa7.82□□□□□ -1.16
PHGDH-228ENST00000641847 IGHV2-70P01814 119 aa7.82□□□□□ -1.16
PHGDH-228ENST00000641847 GYPAP02724 150 aa7.82□□□□□ -1.16
PHGDH-228ENST00000641847 PSG2P11465 335 aa7.82□□□□□ -1.16
PHGDH-228ENST00000641847 MUC1P15941 1255 aaPredicted RBP7.82□□□□□ -1.16
PHGDH-228ENST00000641847 HIST1H1DP16402 221 aaKnown RBP7.82□□□□□ -1.16
PHGDH-228ENST00000641847 CHATP28329 748 aa7.82□□□□□ -1.16
PHGDH-228ENST00000641847 BLVRBP30043 206 aaPredicted RBP7.82□□□□□ -1.16
PHGDH-228ENST00000641847 GPR6P46095 362 aaPredicted RBP7.82□□□□□ -1.16
PHGDH-228ENST00000641847 TAS2R20P59543 309 aa7.82□□□□□ -1.16
PHGDH-228ENST00000641847 COL10A1Q03692 680 aa7.82□□□□□ -1.16
PHGDH-228ENST00000641847 SCN1BQ07699 218 aa7.82□□□□□ -1.16
PHGDH-228ENST00000641847 ZMYND11Q15326 602 aa7.82□□□□□ -1.16
PHGDH-228ENST00000641847 KCNJ8Q15842 424 aa7.82□□□□□ -1.16
PHGDH-228ENST00000641847 SPANXN2Q5MJ10 180 aa7.82□□□□□ -1.16
PHGDH-228ENST00000641847 ATAD3CQ5T2N8 411 aa7.82□□□□□ -1.16
PHGDH-228ENST00000641847 AVPI1Q5T686 147 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms