RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 COLQQ9Y215 455 aaPredicted RBP12.62□□□□□ -0.39
SCARB2-216ENST00000639300 CREBBPQ92793 2442 aa12.62□□□□□ -0.39
SCARB2-216ENST00000639300 LINC00862A6NCI5 91 aa12.62□□□□□ -0.39
SCARB2-216ENST00000639300 BTBD17A6NE02 478 aa12.62□□□□□ -0.39
SCARB2-216ENST00000639300 OR5B21A6NL26 309 aa12.62□□□□□ -0.39
SCARB2-216ENST00000639300 CDRT15L2A8MXV6 281 aa12.62□□□□□ -0.39
SCARB2-216ENST00000639300 SLC25A6P12236 298 aa12.62□□□□□ -0.39
SCARB2-216ENST00000639300 DEFA4P12838 97 aa12.62□□□□□ -0.39
SCARB2-216ENST00000639300 FGF7P21781 194 aa12.62□□□□□ -0.39
SCARB2-216ENST00000639300 DCAF10Q5QP82 559 aa12.62□□□□□ -0.39
SCARB2-216ENST00000639300 NR2C2APQ86WQ0 139 aa12.62□□□□□ -0.39
SCARB2-216ENST00000639300 GAPTQ8N292 157 aa12.62□□□□□ -0.39
SCARB2-216ENST00000639300 FBXO17Q96EF6 278 aa12.62□□□□□ -0.39
SCARB2-216ENST00000639300 GDF15Q99988 308 aa12.62□□□□□ -0.39
SCARB2-216ENST00000639300 AMDHD2Q9Y303 409 aa12.62□□□□□ -0.39
SCARB2-216ENST00000639300 RRP8O43159 456 aaKnown RBP12.62□□□□□ -0.39
SCARB2-216ENST00000639300 FCGR3BO75015 233 aa12.62□□□□□ -0.39
SCARB2-216ENST00000639300 B3GALNT1O75752 331 aa12.62□□□□□ -0.39
SCARB2-216ENST00000639300 SURF2Q15527 256 aaPredicted RBP12.62□□□□□ -0.39
SCARB2-216ENST00000639300 RSPO4Q2I0M5 234 aaPredicted RBP12.62□□□□□ -0.39
SCARB2-216ENST00000639300 Q3ZCU0 254 aa12.62□□□□□ -0.39
SCARB2-216ENST00000639300 ZNF362Q5T0B9 420 aaPredicted RBP12.62□□□□□ -0.39
SCARB2-216ENST00000639300 FAM24BQ8N5W8 94 aa12.62□□□□□ -0.39
SCARB2-216ENST00000639300 OR6S1Q8NH40 331 aa12.62□□□□□ -0.39
SCARB2-216ENST00000639300 ZNF488Q96MN9 340 aa12.62□□□□□ -0.39
SCARB2-216ENST00000639300 SLC7A10Q9NS82 523 aa12.62□□□□□ -0.39
SCARB2-216ENST00000639300 TRGV8A0A0C4DH27 118 aa12.61□□□□□ -0.39
SCARB2-216ENST00000639300 TMEM218A2RU14 115 aa12.61□□□□□ -0.39
SCARB2-216ENST00000639300 SIGLEC5O15389 551 aa12.61□□□□□ -0.39
SCARB2-216ENST00000639300 PGA4P0DJD7 388 aa12.61□□□□□ -0.39
SCARB2-216ENST00000639300 BCL3P20749 454 aa12.61□□□□□ -0.39
SCARB2-216ENST00000639300 SIGLEC14Q08ET2 396 aa12.61□□□□□ -0.39
SCARB2-216ENST00000639300 LIAT1Q6ZQX7 453 aa12.61□□□□□ -0.39
SCARB2-216ENST00000639300 C15orf54Q8N8G6 183 aa12.61□□□□□ -0.39
SCARB2-216ENST00000639300 ZNF107Q9UII5 783 aaPredicted RBP12.61□□□□□ -0.39
SCARB2-216ENST00000639300 GALR2O43603 387 aaPredicted RBP12.61□□□□□ -0.39
SCARB2-216ENST00000639300 OR5G3P0C626 314 aa12.61□□□□□ -0.39
SCARB2-216ENST00000639300 ZNF260Q3ZCT1 412 aa12.61□□□□□ -0.39
SCARB2-216ENST00000639300 OR2A2Q6IF42 318 aa12.61□□□□□ -0.39
SCARB2-216ENST00000639300 NQO2P16083 231 aa12.61□□□□□ -0.39
SCARB2-216ENST00000639300 DVL1P1P54792 670 aaPredicted RBP12.61□□□□□ -0.39
SCARB2-216ENST00000639300 PSG4Q00888 419 aa12.61□□□□□ -0.39
SCARB2-216ENST00000639300 ZNF519Q8TB69 540 aa12.61□□□□□ -0.39
SCARB2-216ENST00000639300 DNASE2BQ8WZ79 361 aa12.61□□□□□ -0.39
SCARB2-216ENST00000639300 RGP1Q92546 391 aaPredicted RBP12.61□□□□□ -0.39
SCARB2-216ENST00000639300 SPSB2Q99619 263 aa12.61□□□□□ -0.39
SCARB2-216ENST00000639300 C12orf57Q99622 126 aa12.61□□□□□ -0.39
SCARB2-216ENST00000639300 UQCC1Q9NVA1 299 aa12.61□□□□□ -0.39
SCARB2-216ENST00000639300 LAMP3Q9UQV4 416 aa12.61□□□□□ -0.39
SCARB2-216ENST00000639300 MPC1Q9Y5U8 109 aa12.61□□□□□ -0.39
SCARB2-216ENST00000639300 IFI6P09912 130 aa12.61□□□□□ -0.39
SCARB2-216ENST00000639300 DAOP14920 347 aa12.61□□□□□ -0.39
SCARB2-216ENST00000639300 FSTP19883 344 aa12.61□□□□□ -0.39
SCARB2-216ENST00000639300 LGALS4P56470 323 aa12.61□□□□□ -0.39
SCARB2-216ENST00000639300 ACOT6Q3I5F7 207 aaPredicted RBP12.61□□□□□ -0.39
SCARB2-216ENST00000639300 CBLN2Q8IUK8 224 aa12.61□□□□□ -0.39
SCARB2-216ENST00000639300 SLC35E1Q96K37 410 aa12.61□□□□□ -0.39
SCARB2-216ENST00000639300 NMES1Q9C002 83 aa12.61□□□□□ -0.39
SCARB2-216ENST00000639300 NDRG3Q9UGV2 375 aa12.61□□□□□ -0.39
SCARB2-216ENST00000639300 STARD10Q9Y365 291 aa12.61□□□□□ -0.39
SCARB2-216ENST00000639300 A0A0G2JMZ2 1700 aa12.6□□□□□ -0.39
SCARB2-216ENST00000639300 LRRC37A2A6NM11 1700 aa12.6□□□□□ -0.39
SCARB2-216ENST00000639300 MED13LQ71F56 2210 aa12.6□□□□□ -0.39
SCARB2-216ENST00000639300 TRAF3IP2O43734 574 aaPredicted RBP12.6□□□□□ -0.39
SCARB2-216ENST00000639300 CHST1O43916 411 aa12.6□□□□□ -0.39
SCARB2-216ENST00000639300 RAMP1O60894 148 aa12.6□□□□□ -0.39
SCARB2-216ENST00000639300 NMBP08949 121 aa12.6□□□□□ -0.39
SCARB2-216ENST00000639300 HOGA1Q86XE5 327 aa12.6□□□□□ -0.39
SCARB2-216ENST00000639300 ZNF561Q8N587 486 aa12.6□□□□□ -0.39
SCARB2-216ENST00000639300 OR2M7Q8NG81 312 aa12.6□□□□□ -0.39
SCARB2-216ENST00000639300 LRRC29Q8WV35 223 aa12.6□□□□□ -0.39
SCARB2-216ENST00000639300 PTX4Q96A99 478 aa12.6□□□□□ -0.39
SCARB2-216ENST00000639300 TRAF4Q9BUZ4 470 aaPredicted RBP12.6□□□□□ -0.39
SCARB2-216ENST00000639300 OR2D2Q9H210 308 aa12.6□□□□□ -0.39
SCARB2-216ENST00000639300 hCG_1809904A0A1W2PP81 198 aa12.6□□□□□ -0.39
SCARB2-216ENST00000639300 A0A1W2PPE2 198 aa12.6□□□□□ -0.39
SCARB2-216ENST00000639300 A0A1W2PR64 198 aa12.6□□□□□ -0.39
SCARB2-216ENST00000639300 A0A1W2PRV1 198 aa12.6□□□□□ -0.39
SCARB2-216ENST00000639300 F6UZH7 168 aa12.6□□□□□ -0.39
SCARB2-216ENST00000639300 H2BFSP57053 126 aa12.6□□□□□ -0.39
SCARB2-216ENST00000639300 IL13RA2Q14627 380 aa12.6□□□□□ -0.39
SCARB2-216ENST00000639300 ZNF528Q3MIS6 628 aa12.6□□□□□ -0.39
SCARB2-216ENST00000639300 ZNF429Q86V71 674 aa12.6□□□□□ -0.39
SCARB2-216ENST00000639300 SAP25Q8TEE9 199 aa12.6□□□□□ -0.39
SCARB2-216ENST00000639300 NTNG2Q96CW9 530 aa12.6□□□□□ -0.39
SCARB2-216ENST00000639300 TPPP3Q9BW30 176 aa12.6□□□□□ -0.39
SCARB2-216ENST00000639300 GPR87Q9BY21 358 aa12.6□□□□□ -0.39
SCARB2-216ENST00000639300 MTCH1Q9NZJ7 389 aa12.6□□□□□ -0.39
SCARB2-216ENST00000639300 C1orf100Q5SVJ3 147 aa12.6□□□□□ -0.39
SCARB2-216ENST00000639300 LYG1Q8N1E2 194 aa12.6□□□□□ -0.39
SCARB2-216ENST00000639300 AP1S3Q96PC3 154 aa12.6□□□□□ -0.39
SCARB2-216ENST00000639300 RAB40CQ96S21 281 aa12.6□□□□□ -0.39
SCARB2-216ENST00000639300 PRDM6Q9NQX0 595 aa12.6□□□□□ -0.39
SCARB2-216ENST00000639300 VWA8A3KMH1 1905 aa12.59□□□□□ -0.39
SCARB2-216ENST00000639300 A0A0G2JK05 382 aa12.59□□□□□ -0.39
SCARB2-216ENST00000639300 VDAC1P21796 283 aa12.59□□□□□ -0.39
SCARB2-216ENST00000639300 IL3RAP26951 378 aa12.59□□□□□ -0.39
SCARB2-216ENST00000639300 GNB1P62873 340 aa12.59□□□□□ -0.39
SCARB2-216ENST00000639300 ENDOGQ14249 297 aaKnown RBP12.59□□□□□ -0.39
SCARB2-216ENST00000639300 COL19A1Q14993 1142 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms