RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 PTX4Q96A99 478 aa17.3■□□□□ 0.36
CACNA1A-257ENST00000638009 TIMP4Q99727 224 aa17.3■□□□□ 0.36
CACNA1A-257ENST00000638009 CACNG7P62955 275 aa17.3■□□□□ 0.36
CACNA1A-257ENST00000638009 SDF2Q99470 211 aa17.3■□□□□ 0.36
CACNA1A-257ENST00000638009 A4GNTQ9UNA3 340 aa17.3■□□□□ 0.36
CACNA1A-257ENST00000638009 P2RY1P47900 373 aa17.3■□□□□ 0.36
CACNA1A-257ENST00000638009 ZNF707Q96C28 371 aaPredicted RBP17.3■□□□□ 0.36
CACNA1A-257ENST00000638009 SPANXA1Q9NS26 97 aa17.3■□□□□ 0.36
CACNA1A-257ENST00000638009 C19orf53Q9UNZ5 99 aaPredicted RBP17.3■□□□□ 0.36
CACNA1A-257ENST00000638009 Q6ZPB1 254 aaPredicted RBP17.3■□□□□ 0.36
CACNA1A-257ENST00000638009 FGF14Q92915 247 aa17.3■□□□□ 0.36
CACNA1A-257ENST00000638009 C10orf35Q96D05 121 aa17.3■□□□□ 0.36
CACNA1A-257ENST00000638009 EMC6Q9BV81 110 aa17.3■□□□□ 0.36
CACNA1A-257ENST00000638009 EMCNQ9ULC0 261 aa17.3■□□□□ 0.36
CACNA1A-257ENST00000638009 PSMB5P28074 263 aa17.29■□□□□ 0.36
CACNA1A-257ENST00000638009 AWAT1Q58HT5 328 aa17.29■□□□□ 0.36
CACNA1A-257ENST00000638009 OR10AG1Q8NH19 301 aa17.29■□□□□ 0.36
CACNA1A-257ENST00000638009 MSL2Q9HCI7 577 aa17.29■□□□□ 0.36
CACNA1A-257ENST00000638009 FGF20Q9NP95 211 aaPredicted RBP17.29■□□□□ 0.36
CACNA1A-257ENST00000638009 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.29■□□□□ 0.36
CACNA1A-257ENST00000638009 PI3P19957 117 aa17.29■□□□□ 0.36
CACNA1A-257ENST00000638009 METRNLQ641Q3 311 aa17.29■□□□□ 0.36
CACNA1A-257ENST00000638009 NEUROG1Q92886 237 aa17.29■□□□□ 0.36
CACNA1A-257ENST00000638009 SIT1Q9Y3P8 196 aa17.29■□□□□ 0.36
CACNA1A-257ENST00000638009 MALRD1Q5VYJ5 2156 aa17.29■□□□□ 0.36
CACNA1A-257ENST00000638009 DYNLT3P51808 116 aa17.29■□□□□ 0.36
CACNA1A-257ENST00000638009 GSG1Q2KHT4 349 aa17.29■□□□□ 0.36
CACNA1A-257ENST00000638009 NSUN5P2Q63ZY6 315 aa17.29■□□□□ 0.36
CACNA1A-257ENST00000638009 MRPL30Q8TCC3 161 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-257ENST00000638009 AGRNO00468 2067 aa17.29■□□□□ 0.36
CACNA1A-257ENST00000638009 SLC25A20O43772 301 aa17.29■□□□□ 0.36
CACNA1A-257ENST00000638009 B3GALT4O96024 378 aa17.29■□□□□ 0.36
CACNA1A-257ENST00000638009 KCNMB1Q16558 191 aa17.29■□□□□ 0.36
CACNA1A-257ENST00000638009 LINC00596Q86U02 117 aa17.29■□□□□ 0.36
CACNA1A-257ENST00000638009 NOXO1Q8NFA2 376 aa17.29■□□□□ 0.36
CACNA1A-257ENST00000638009 OIT3Q8WWZ8 545 aa17.29■□□□□ 0.36
CACNA1A-257ENST00000638009 HOXC4P09017 264 aaPredicted RBP17.29■□□□□ 0.36
CACNA1A-257ENST00000638009 MAS1LP35410 378 aa17.29■□□□□ 0.36
CACNA1A-257ENST00000638009 ZNF841Q6ZN19 808 aa17.29■□□□□ 0.36
CACNA1A-257ENST00000638009 PHOSPHO2Q8TCD6 241 aa17.29■□□□□ 0.36
CACNA1A-257ENST00000638009 RND1Q92730 232 aa17.29■□□□□ 0.36
CACNA1A-257ENST00000638009 PRSS2P07478 247 aa17.29■□□□□ 0.36
CACNA1A-257ENST00000638009 LIMK1P53667 647 aa17.29■□□□□ 0.36
CACNA1A-257ENST00000638009 SLC16A11Q8NCK7 471 aa17.29■□□□□ 0.36
CACNA1A-257ENST00000638009 NEURL2Q9BR09 285 aa17.29■□□□□ 0.36
CACNA1A-257ENST00000638009 FUT9Q9Y231 359 aa17.29■□□□□ 0.36
CACNA1A-257ENST00000638009 S1PR2O95136 353 aa17.29■□□□□ 0.36
CACNA1A-257ENST00000638009 INSM1Q01101 510 aaPredicted RBP17.29■□□□□ 0.36
CACNA1A-257ENST00000638009 BCORP1Q8N888 145 aa17.29■□□□□ 0.36
CACNA1A-257ENST00000638009 KLF16Q9BXK1 252 aaPredicted RBP17.29■□□□□ 0.36
CACNA1A-257ENST00000638009 ZNF385DQ9H6B1 395 aa17.29■□□□□ 0.36
CACNA1A-257ENST00000638009 MRPL16Q9NX20 251 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-257ENST00000638009 IL19Q9UHD0 177 aa17.29■□□□□ 0.36
CACNA1A-257ENST00000638009 XIRP1Q702N8 1843 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-257ENST00000638009 SMAD6O43541 496 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-257ENST00000638009 SRSF10O75494 262 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-257ENST00000638009 CKS2P33552 79 aa17.28■□□□□ 0.36
CACNA1A-257ENST00000638009 GALNT14Q96FL9 552 aa17.28■□□□□ 0.36
CACNA1A-257ENST00000638009 ZNF195O14628 629 aa17.28■□□□□ 0.36
CACNA1A-257ENST00000638009 HPXP02790 462 aa17.28■□□□□ 0.36
CACNA1A-257ENST00000638009 RPS20P60866 119 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-257ENST00000638009 SIX1Q15475 284 aaPredicted RBP17.28■□□□□ 0.36
CACNA1A-257ENST00000638009 C10orf113Q5VZT2 155 aa17.28■□□□□ 0.36
CACNA1A-257ENST00000638009 PTOV1Q86YD1 416 aa17.28■□□□□ 0.36
CACNA1A-257ENST00000638009 TRBV9A0A0B4J1U6 114 aa17.28■□□□□ 0.36
CACNA1A-257ENST00000638009 IGHV3-9P01782 118 aa17.28■□□□□ 0.36
CACNA1A-257ENST00000638009 RAB33BQ9H082 229 aa17.28■□□□□ 0.36
CACNA1A-257ENST00000638009 PRSS54Q6PEW0 395 aa17.28■□□□□ 0.36
CACNA1A-257ENST00000638009 PDXPQ96GD0 296 aa17.28■□□□□ 0.36
CACNA1A-257ENST00000638009 DSCR4P56555 118 aaPredicted RBP17.28■□□□□ 0.36
CACNA1A-257ENST00000638009 WNT16Q9UBV4 365 aa17.28■□□□□ 0.36
CACNA1A-257ENST00000638009 KCNMB2Q9Y691 235 aa17.28■□□□□ 0.36
CACNA1A-257ENST00000638009 TCF24Q7RTU0 167 aa17.28■□□□□ 0.36
CACNA1A-257ENST00000638009 DEFB108BQ8NET1 73 aa17.28■□□□□ 0.36
CACNA1A-257ENST00000638009 FOLR2P14207 255 aa17.28■□□□□ 0.36
CACNA1A-257ENST00000638009 TMEM108Q6UXF1 575 aa17.28■□□□□ 0.36
CACNA1A-257ENST00000638009 TCF23Q7RTU1 214 aa17.27■□□□□ 0.36
CACNA1A-257ENST00000638009 PLSCR3Q9NRY6 295 aa17.27■□□□□ 0.36
CACNA1A-257ENST00000638009 COA4Q9NYJ1 87 aa17.27■□□□□ 0.36
CACNA1A-257ENST00000638009 PRNDQ9UKY0 176 aa17.27■□□□□ 0.36
CACNA1A-257ENST00000638009 RGPD3A6NKT7 1758 aaPredicted RBP17.27■□□□□ 0.36
CACNA1A-257ENST00000638009 AKR7A2O43488 359 aa17.27■□□□□ 0.36
CACNA1A-257ENST00000638009 SMIM13P0DJ93 91 aa17.27■□□□□ 0.36
CACNA1A-257ENST00000638009 PCMT1P22061 227 aa17.27■□□□□ 0.36
CACNA1A-257ENST00000638009 SH3BGRL3Q9H299 93 aa17.27■□□□□ 0.36
CACNA1A-257ENST00000638009 GABRA1P14867 456 aa17.27■□□□□ 0.36
CACNA1A-257ENST00000638009 PCP4P48539 62 aa17.27■□□□□ 0.36
CACNA1A-257ENST00000638009 FAM71F2Q6NXP2 309 aa17.27■□□□□ 0.36
CACNA1A-257ENST00000638009 C1QTNF9BB2RNN3 333 aa17.27■□□□□ 0.36
CACNA1A-257ENST00000638009 HMGN4O00479 90 aa17.27■□□□□ 0.36
CACNA1A-257ENST00000638009 MAP1LC3AQ9H492 121 aa17.27■□□□□ 0.36
CACNA1A-257ENST00000638009 PHLDA3Q9Y5J5 127 aa17.27■□□□□ 0.36
CACNA1A-257ENST00000638009 PTGER1P34995 402 aa17.27■□□□□ 0.35
CACNA1A-257ENST00000638009 LINC00303Q3SY05 128 aa17.27■□□□□ 0.35
CACNA1A-257ENST00000638009 SEMG1P04279 462 aa17.27■□□□□ 0.35
CACNA1A-257ENST00000638009 CTSCP53634 463 aa17.27■□□□□ 0.35
CACNA1A-257ENST00000638009 FAM53BQ14153 422 aa17.27■□□□□ 0.35
CACNA1A-257ENST00000638009 ASB5Q8WWX0 329 aa17.27■□□□□ 0.35
CACNA1A-257ENST00000638009 CREBBPQ92793 2442 aa17.27■□□□□ 0.35
CACNA1A-257ENST00000638009 AFMIDQ63HM1 303 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms