RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 RPS4Y2Q8TD47 263 aa11.2□□□□□ -0.62
PNKP-228ENST00000637325 GHSRQ92847 366 aa11.2□□□□□ -0.62
PNKP-228ENST00000637325 MALSU1Q96EH3 234 aa11.2□□□□□ -0.62
PNKP-228ENST00000637325 GAL3ST2Q9H3Q3 398 aa11.2□□□□□ -0.62
PNKP-228ENST00000637325 C16orf95Q9H693 158 aa11.2□□□□□ -0.62
PNKP-228ENST00000637325 RAB18Q9NP72 206 aa11.2□□□□□ -0.62
PNKP-228ENST00000637325 TMEM138Q9NPI0 162 aa11.2□□□□□ -0.62
PNKP-228ENST00000637325 ABCB10Q9NRK6 738 aa11.2□□□□□ -0.62
PNKP-228ENST00000637325 CNOT2Q9NZN8 540 aaKnown RBP11.2□□□□□ -0.62
PNKP-228ENST00000637325 CKLFQ9UBR5 152 aa11.2□□□□□ -0.62
PNKP-228ENST00000637325 FAM90A8PA6NJQ4 464 aa11.19□□□□□ -0.62
PNKP-228ENST00000637325 ODF3BA8MYP8 253 aa11.19□□□□□ -0.62
PNKP-228ENST00000637325 H0YJX3 145 aa11.19□□□□□ -0.62
PNKP-228ENST00000637325 SLC33A1O00400 549 aaPredicted RBP11.19□□□□□ -0.62
PNKP-228ENST00000637325 GABRPO00591 440 aa11.19□□□□□ -0.62
PNKP-228ENST00000637325 XPNPEP2O43895 674 aa11.19□□□□□ -0.62
PNKP-228ENST00000637325 TSPAN9O75954 239 aa11.19□□□□□ -0.62
PNKP-228ENST00000637325 HTR3BO95264 441 aa11.19□□□□□ -0.62
PNKP-228ENST00000637325 LALBAP00709 142 aa11.19□□□□□ -0.62
PNKP-228ENST00000637325 BDKRB2P30411 391 aa11.19□□□□□ -0.62
PNKP-228ENST00000637325 ZNF93P35789 620 aaPredicted RBP11.19□□□□□ -0.62
PNKP-228ENST00000637325 GLIPR1P48060 266 aa11.19□□□□□ -0.62
PNKP-228ENST00000637325 TAS2R43P59537 309 aa11.19□□□□□ -0.62
PNKP-228ENST00000637325 SSX2Q16385 188 aa11.19□□□□□ -0.62
PNKP-228ENST00000637325 PAN3Q58A45 887 aaKnown RBP11.19□□□□□ -0.62
PNKP-228ENST00000637325 YIF1BQ5BJH7 314 aa11.19□□□□□ -0.62
PNKP-228ENST00000637325 DDI2Q5TDH0 399 aa11.19□□□□□ -0.62
PNKP-228ENST00000637325 ZNF626Q68DY1 528 aa11.19□□□□□ -0.62
PNKP-228ENST00000637325 ELP2Q6IA86 826 aa11.19□□□□□ -0.62
PNKP-228ENST00000637325 SLC35E4Q6ICL7 350 aa11.19□□□□□ -0.62
PNKP-228ENST00000637325 OR52W1Q6IF63 320 aa11.19□□□□□ -0.62
PNKP-228ENST00000637325 ZNF529Q6P280 563 aa11.19□□□□□ -0.62
PNKP-228ENST00000637325 AHSA2Q719I0 299 aa11.19□□□□□ -0.62
PNKP-228ENST00000637325 OR13C5Q8NGS8 318 aa11.19□□□□□ -0.62
PNKP-228ENST00000637325 NDNFQ8TB73 568 aa11.19□□□□□ -0.62
PNKP-228ENST00000637325 CLEC7AQ9BXN2 247 aa11.19□□□□□ -0.62
PNKP-228ENST00000637325 METTL9Q9H1A3 318 aa11.19□□□□□ -0.62
PNKP-228ENST00000637325 TMEM133Q9H2Q1 129 aa11.19□□□□□ -0.62
PNKP-228ENST00000637325 PSORS1C1Q9UIG5 152 aa11.19□□□□□ -0.62
PNKP-228ENST00000637325 PKD1L1Q8TDX9 2849 aa11.19□□□□□ -0.62
PNKP-228ENST00000637325 CMYA5Q8N3K9 4069 aa11.19□□□□□ -0.62
PNKP-228ENST00000637325 IGHV2-26A0A0B4J1V2 119 aa11.18□□□□□ -0.62
PNKP-228ENST00000637325 PNMA8CA0A1B0GUJ8 204 aa11.18□□□□□ -0.62
PNKP-228ENST00000637325 ODAMA1E959 279 aa11.18□□□□□ -0.62
PNKP-228ENST00000637325 HSPB6O14558 160 aa11.18□□□□□ -0.62
PNKP-228ENST00000637325 CSTBP04080 98 aaKnown RBP11.18□□□□□ -0.62
PNKP-228ENST00000637325 CSN2P05814 226 aa11.18□□□□□ -0.62
PNKP-228ENST00000637325 GABRA5P31644 462 aa11.18□□□□□ -0.62
PNKP-228ENST00000637325 PTGFRP43088 359 aa11.18□□□□□ -0.62
PNKP-228ENST00000637325 OR3A4PP47883 348 aa11.18□□□□□ -0.62
PNKP-228ENST00000637325 SLC34A1Q06495 639 aa11.18□□□□□ -0.62
PNKP-228ENST00000637325 RIPK1Q13546 671 aa11.18□□□□□ -0.62
PNKP-228ENST00000637325 IL13RA2Q14627 380 aa11.18□□□□□ -0.62
PNKP-228ENST00000637325 ATXN7L3Q14CW9 347 aaPredicted RBP11.18□□□□□ -0.62
PNKP-228ENST00000637325 Q499Y3 187 aa11.18□□□□□ -0.62
PNKP-228ENST00000637325 MINOS1Q5TGZ0 78 aa11.18□□□□□ -0.62
PNKP-228ENST00000637325 PRAMEF5Q5TYX0 476 aa11.18□□□□□ -0.62
PNKP-228ENST00000637325 DMKNQ6E0U4 476 aaPredicted RBP11.18□□□□□ -0.62
PNKP-228ENST00000637325 ASPHD2Q6ICH7 369 aa11.18□□□□□ -0.62
PNKP-228ENST00000637325 LIAT1Q6ZQX7 453 aa11.18□□□□□ -0.62
PNKP-228ENST00000637325 OR4C13Q8NGP0 309 aa11.18□□□□□ -0.62
PNKP-228ENST00000637325 OR10K1Q8NGX5 313 aa11.18□□□□□ -0.62
PNKP-228ENST00000637325 CORO2AQ92828 525 aa11.18□□□□□ -0.62
PNKP-228ENST00000637325 NKX3-1Q99801 234 aaPredicted RBP11.18□□□□□ -0.62
PNKP-228ENST00000637325 CITED1Q99966 193 aa11.18□□□□□ -0.62
PNKP-228ENST00000637325 TCF7L1Q9HCS4 588 aa11.18□□□□□ -0.62
PNKP-228ENST00000637325 PLCXD1Q9NUJ7 323 aa11.18□□□□□ -0.62
PNKP-228ENST00000637325 TAS2R3Q9NYW6 316 aa11.18□□□□□ -0.62
PNKP-228ENST00000637325 MINOS1-NBL1R4GNA1 71 aa11.18□□□□□ -0.62
PNKP-228ENST00000637325 TRBV5-5A0A0J9YX44 114 aa11.17□□□□□ -0.62
PNKP-228ENST00000637325 TIMM23O14925 209 aa11.17□□□□□ -0.62
PNKP-228ENST00000637325 MMP23AO75900 390 aa11.17□□□□□ -0.62
PNKP-228ENST00000637325 CDRT1O95170 752 aa11.17□□□□□ -0.62
PNKP-228ENST00000637325 CDK2P24941 298 aa11.17□□□□□ -0.62
PNKP-228ENST00000637325 C21orf33P30042 268 aaPredicted RBP11.17□□□□□ -0.62
PNKP-228ENST00000637325 RAB13P51153 203 aa11.17□□□□□ -0.62
PNKP-228ENST00000637325 WNT4P56705 351 aa11.17□□□□□ -0.62
PNKP-228ENST00000637325 PROK1P58294 105 aa11.17□□□□□ -0.62
PNKP-228ENST00000637325 PIGYQ3MUY2 71 aa11.17□□□□□ -0.62
PNKP-228ENST00000637325 HEPN1Q6WQI6 88 aa11.17□□□□□ -0.62
PNKP-228ENST00000637325 DYNAPQ8N1N2 210 aa11.17□□□□□ -0.62
PNKP-228ENST00000637325 ABHD12Q8N2K0 398 aa11.17□□□□□ -0.62
PNKP-228ENST00000637325 DTX3Q8N9I9 347 aa11.17□□□□□ -0.62
PNKP-228ENST00000637325 OR4D6Q8NGJ1 314 aa11.17□□□□□ -0.62
PNKP-228ENST00000637325 OR51T1Q8NGJ9 327 aa11.17□□□□□ -0.62
PNKP-228ENST00000637325 FBLIM1Q8WUP2 373 aa11.17□□□□□ -0.62
PNKP-228ENST00000637325 TFAP2CQ92754 450 aa11.17□□□□□ -0.62
PNKP-228ENST00000637325 ORAI1Q96D31 301 aa11.17□□□□□ -0.62
PNKP-228ENST00000637325 COQ2Q96H96 371 aa11.17□□□□□ -0.62
PNKP-228ENST00000637325 BARHL1Q9BZE3 327 aa11.17□□□□□ -0.62
PNKP-228ENST00000637325 NPFFR1Q9GZQ6 430 aa11.17□□□□□ -0.62
PNKP-228ENST00000637325 PCDHB16Q9NRJ7 776 aa11.17□□□□□ -0.62
PNKP-228ENST00000637325 PAK1IP1Q9NWT1 392 aaPredicted RBP11.17□□□□□ -0.62
PNKP-228ENST00000637325 OR6C3Q9NZP0 311 aa11.17□□□□□ -0.62
PNKP-228ENST00000637325 NKX1-2Q9UD57 310 aaPredicted RBP11.17□□□□□ -0.62
PNKP-228ENST00000637325 ERGIC3Q9Y282 383 aa11.17□□□□□ -0.62
PNKP-228ENST00000637325 HILPDAQ9Y5L2 63 aa11.17□□□□□ -0.62
PNKP-228ENST00000637325 A0A1W2PPK0 400 aa11.16□□□□□ -0.62
PNKP-228ENST00000637325 VGLL3A8MV65 326 aa11.16□□□□□ -0.62
PNKP-228ENST00000637325 H3BUI4 141 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms