RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 TMBIM6P55061 237 aa8□□□□□ -1.13
LINC00339-210ENST00000635675 SCN1BQ07699 218 aa8□□□□□ -1.13
LINC00339-210ENST00000635675 SCGB2A2Q13296 93 aa8□□□□□ -1.13
LINC00339-210ENST00000635675 GPR176Q14439 515 aa8□□□□□ -1.13
LINC00339-210ENST00000635675 IL13RA2Q14627 380 aa8□□□□□ -1.13
LINC00339-210ENST00000635675 CTF1Q16619 201 aa8□□□□□ -1.13
LINC00339-210ENST00000635675 SLC22A6Q4U2R8 563 aa8□□□□□ -1.13
LINC00339-210ENST00000635675 NHLRC3Q5JS37 347 aa8□□□□□ -1.13
LINC00339-210ENST00000635675 C1orf100Q5SVJ3 147 aa8□□□□□ -1.13
LINC00339-210ENST00000635675 GLIPR1L1Q6UWM5 242 aa8□□□□□ -1.13
LINC00339-210ENST00000635675 GDPD3Q7L5L3 318 aa8□□□□□ -1.13
LINC00339-210ENST00000635675 CMTM4Q8IZR5 234 aa8□□□□□ -1.13
LINC00339-210ENST00000635675 OSR2Q8N2R0 312 aa8□□□□□ -1.13
LINC00339-210ENST00000635675 C11orf42Q8N5U0 333 aa8□□□□□ -1.13
LINC00339-210ENST00000635675 CHST4Q8NCG5 386 aa8□□□□□ -1.13
LINC00339-210ENST00000635675 OR4D6Q8NGJ1 314 aa8□□□□□ -1.13
LINC00339-210ENST00000635675 FOXRED1Q96CU9 486 aaPredicted RBP8□□□□□ -1.13
LINC00339-210ENST00000635675 S100A13Q99584 98 aa8□□□□□ -1.13
LINC00339-210ENST00000635675 CHST6Q9GZX3 395 aa8□□□□□ -1.13
LINC00339-210ENST00000635675 UNKLQ9H9P5 680 aaKnown RBP8□□□□□ -1.13
LINC00339-210ENST00000635675 PCDHB16Q9NRJ7 776 aa8□□□□□ -1.13
LINC00339-210ENST00000635675 ONECUT1Q9UBC0 465 aa8□□□□□ -1.13
LINC00339-210ENST00000635675 ZNF69Q9UC07 566 aa8□□□□□ -1.13
LINC00339-210ENST00000635675 MRPS28Q9Y2Q9 187 aaKnown RBP8□□□□□ -1.13
LINC00339-210ENST00000635675 ATRQ13535 2644 aa7.99□□□□□ -1.13
LINC00339-210ENST00000635675 IGHV3OR16-10A0A075B7F0 116 aa7.99□□□□□ -1.13
LINC00339-210ENST00000635675 TRAV24A0A0B4J272 114 aa7.99□□□□□ -1.13
LINC00339-210ENST00000635675 TRAV40A0A0B4J280 105 aa7.99□□□□□ -1.13
LINC00339-210ENST00000635675 CENPVL3A0A0U1RRI6 287 aa7.99□□□□□ -1.13
LINC00339-210ENST00000635675 TRDV1A0A1B0GX56 115 aa7.99□□□□□ -1.13
LINC00339-210ENST00000635675 A0A1W2PP11 408 aa7.99□□□□□ -1.13
LINC00339-210ENST00000635675 M0R1W7 72 aa7.99□□□□□ -1.13
LINC00339-210ENST00000635675 SLC33A1O00400 549 aaPredicted RBP7.99□□□□□ -1.13
LINC00339-210ENST00000635675 MGST3O14880 152 aa7.99□□□□□ -1.13
LINC00339-210ENST00000635675 ARL6IP5O75915 188 aa7.99□□□□□ -1.13
LINC00339-210ENST00000635675 CSTBP04080 98 aaKnown RBP7.99□□□□□ -1.13
LINC00339-210ENST00000635675 ZNF44P15621 663 aa7.99□□□□□ -1.13
LINC00339-210ENST00000635675 GALP22466 123 aa7.99□□□□□ -1.13
LINC00339-210ENST00000635675 FPR2P25090 351 aa7.99□□□□□ -1.13
LINC00339-210ENST00000635675 ERP29P30040 261 aaKnown RBP7.99□□□□□ -1.13
LINC00339-210ENST00000635675 DLX6P56179 175 aa7.99□□□□□ -1.13
LINC00339-210ENST00000635675 RBM11P57052 281 aaKnown RBP7.99□□□□□ -1.13
LINC00339-210ENST00000635675 MXD1Q05195 221 aa7.99□□□□□ -1.13
LINC00339-210ENST00000635675 MEF2CQ06413 473 aaPredicted RBP7.99□□□□□ -1.13
LINC00339-210ENST00000635675 PDCD1Q15116 288 aa7.99□□□□□ -1.13
LINC00339-210ENST00000635675 GRK1Q15835 563 aa7.99□□□□□ -1.13
LINC00339-210ENST00000635675 PIGYQ3MUY2 71 aa7.99□□□□□ -1.13
LINC00339-210ENST00000635675 GLT8D1Q68CQ7 371 aa7.99□□□□□ -1.13
LINC00339-210ENST00000635675 C9orf139Q6ZV77 190 aa7.99□□□□□ -1.13
LINC00339-210ENST00000635675 VMO1Q7Z5L0 202 aa7.99□□□□□ -1.13
LINC00339-210ENST00000635675 FAM185AQ8N0U4 392 aa7.99□□□□□ -1.13
LINC00339-210ENST00000635675 BCL6BQ8N143 479 aaPredicted RBP7.99□□□□□ -1.13
LINC00339-210ENST00000635675 PPP1R35Q8TAP8 253 aa7.99□□□□□ -1.13
LINC00339-210ENST00000635675 TNFRSF14Q92956 283 aa7.99□□□□□ -1.13
LINC00339-210ENST00000635675 MRPS24Q96EL2 167 aaKnown RBP7.99□□□□□ -1.13
LINC00339-210ENST00000635675 GFI1Q99684 422 aa7.99□□□□□ -1.13
LINC00339-210ENST00000635675 SLITRK2Q9H156 845 aa7.99□□□□□ -1.13
LINC00339-210ENST00000635675 DCSTAMPQ9H295 470 aa7.99□□□□□ -1.13
LINC00339-210ENST00000635675 IFT22Q9H7X7 185 aa7.99□□□□□ -1.13
LINC00339-210ENST00000635675 METTL8Q9H825 291 aaKnown RBP7.99□□□□□ -1.13
LINC00339-210ENST00000635675 TXNL4BQ9NX01 149 aaKnown RBP7.99□□□□□ -1.13
LINC00339-210ENST00000635675 ST3GAL6Q9Y274 331 aa7.99□□□□□ -1.13
LINC00339-210ENST00000635675 CSN2P05814 226 aa7.98□□□□□ -1.13
LINC00339-210ENST00000635675 CLEC2LP0C7M8 214 aa7.98□□□□□ -1.13
LINC00339-210ENST00000635675 GTF2F2P13984 249 aa7.98□□□□□ -1.13
LINC00339-210ENST00000635675 ZNF182P17025 639 aaPredicted RBP7.98□□□□□ -1.13
LINC00339-210ENST00000635675 SERPINA2P20848 420 aa7.98□□□□□ -1.13
LINC00339-210ENST00000635675 PRTN3P24158 256 aa7.98□□□□□ -1.13
LINC00339-210ENST00000635675 CALRP27797 417 aaKnown RBP7.98□□□□□ -1.13
LINC00339-210ENST00000635675 P2RX3P56373 397 aa7.98□□□□□ -1.13
LINC00339-210ENST00000635675 EDDM3BP56851 147 aa7.98□□□□□ -1.13
LINC00339-210ENST00000635675 BPIFB3P59826 476 aa7.98□□□□□ -1.13
LINC00339-210ENST00000635675 EDDM3AQ14507 147 aa7.98□□□□□ -1.13
LINC00339-210ENST00000635675 ZNF273Q14593 569 aa7.98□□□□□ -1.13
LINC00339-210ENST00000635675 TIMM50Q3ZCQ8 353 aa7.98□□□□□ -1.13
LINC00339-210ENST00000635675 GPR157Q5UAW9 335 aa7.98□□□□□ -1.13
LINC00339-210ENST00000635675 AWAT2Q6E213 333 aa7.98□□□□□ -1.13
LINC00339-210ENST00000635675 METAP1DQ6UB28 335 aaPredicted RBP7.98□□□□□ -1.13
LINC00339-210ENST00000635675 USP43Q70EL4 1123 aa7.98□□□□□ -1.13
LINC00339-210ENST00000635675 TCF23Q7RTU1 214 aa7.98□□□□□ -1.13
LINC00339-210ENST00000635675 TMEM104Q8NE00 496 aa7.98□□□□□ -1.13
LINC00339-210ENST00000635675 C22orf15Q8WYQ4 148 aa7.98□□□□□ -1.13
LINC00339-210ENST00000635675 LHX4Q969G2 390 aa7.98□□□□□ -1.13
LINC00339-210ENST00000635675 SLC6A7Q99884 636 aa7.98□□□□□ -1.13
LINC00339-210ENST00000635675 PPA2Q9H2U2 334 aa7.98□□□□□ -1.13
LINC00339-210ENST00000635675 OCEL1Q9H607 264 aa7.98□□□□□ -1.13
LINC00339-210ENST00000635675 SIRT7Q9NRC8 400 aa7.98□□□□□ -1.13
LINC00339-210ENST00000635675 ZNF581Q9P0T4 197 aa7.98□□□□□ -1.13
LINC00339-210ENST00000635675 GHRLQ9UBU3 117 aa7.98□□□□□ -1.13
LINC00339-210ENST00000635675 SOX21Q9Y651 276 aaPredicted RBP7.98□□□□□ -1.13
LINC00339-210ENST00000635675 A0A0A6YYJ9 748 aa7.97□□□□□ -1.13
LINC00339-210ENST00000635675 TRAV1-2A0A0B4J238 106 aa7.97□□□□□ -1.13
LINC00339-210ENST00000635675 IGHV1-69DA0A0B4J2H0 117 aa7.97□□□□□ -1.13
LINC00339-210ENST00000635675 A0A1W2PPH5 198 aa7.97□□□□□ -1.13
LINC00339-210ENST00000635675 hADV38S2A0JD32 116 aa7.97□□□□□ -1.13
LINC00339-210ENST00000635675 SHISA3A0PJX4 238 aa7.97□□□□□ -1.13
LINC00339-210ENST00000635675 C17orf98A8MV24 154 aa7.97□□□□□ -1.13
LINC00339-210ENST00000635675 RNASEK-C17orf49H0YIS7 233 aa7.97□□□□□ -1.13
LINC00339-210ENST00000635675 GEMIN2O14893 280 aaKnown RBP7.97□□□□□ -1.13
LINC00339-210ENST00000635675 SLC22A1O15245 554 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms