RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 HKR1P10072 659 aa7.9□□□□□ -1.15
VCL-206ENST00000623461 EDN3P14138 238 aa7.9□□□□□ -1.15
VCL-206ENST00000623461 RAB7AP51149 207 aa7.9□□□□□ -1.15
VCL-206ENST00000623461 OTPQ5XKR4 325 aa7.9□□□□□ -1.15
VCL-206ENST00000623461 OR1F12Q8NHA8 337 aa7.9□□□□□ -1.15
VCL-206ENST00000623461 SLC37A2Q8TED4 501 aa7.9□□□□□ -1.15
VCL-206ENST00000623461 OR5AC2Q9NZP5 309 aa7.9□□□□□ -1.15
VCL-206ENST00000623461 SPINK4O60575 86 aa7.9□□□□□ -1.15
VCL-206ENST00000623461 GLULP15104 373 aa7.9□□□□□ -1.15
VCL-206ENST00000623461 H2BFSP57053 126 aa7.9□□□□□ -1.15
VCL-206ENST00000623461 ZIC1Q15915 447 aa7.9□□□□□ -1.15
VCL-206ENST00000623461 ACER2Q5QJU3 275 aa7.9□□□□□ -1.15
VCL-206ENST00000623461 HSPB9Q9BQS6 159 aa7.9□□□□□ -1.15
VCL-206ENST00000623461 P4HTMQ9NXG6 502 aa7.9□□□□□ -1.15
VCL-206ENST00000623461 STRCP1A6NGW2 1772 aa7.9□□□□□ -1.15
VCL-206ENST00000623461 A0A1W2PNR3 127 aa7.89□□□□□ -1.15
VCL-206ENST00000623461 SOCS1O15524 211 aa7.89□□□□□ -1.15
VCL-206ENST00000623461 WBP2Q969T9 261 aa7.89□□□□□ -1.15
VCL-206ENST00000623461 COL25A1Q9BXS0 654 aaPredicted RBP7.89□□□□□ -1.15
VCL-206ENST00000623461 PRR13Q9NZ81 148 aa7.89□□□□□ -1.15
VCL-206ENST00000623461 RALYQ9UKM9 306 aaKnown RBP7.89□□□□□ -1.15
VCL-206ENST00000623461 TMIGD3P0DMS9 266 aaPredicted RBP7.89□□□□□ -1.15
VCL-206ENST00000623461 HOXA5P20719 270 aa7.89□□□□□ -1.15
VCL-206ENST00000623461 C19orf48Q6RUI8 117 aa7.89□□□□□ -1.15
VCL-206ENST00000623461 OR10AD1Q8NGE0 317 aa7.89□□□□□ -1.15
VCL-206ENST00000623461 TIMD4Q96H15 378 aa7.89□□□□□ -1.15
VCL-206ENST00000623461 BOD1Q96IK1 185 aa7.89□□□□□ -1.15
VCL-206ENST00000623461 FGF21Q9NSA1 209 aa7.89□□□□□ -1.15
VCL-206ENST00000623461 ERRFI1Q9UJM3 462 aaPredicted RBP7.89□□□□□ -1.15
VCL-206ENST00000623461 KCNMB2Q9Y691 235 aa7.89□□□□□ -1.15
VCL-206ENST00000623461 KLRC4-KLRK1H3BQV0 150 aa7.89□□□□□ -1.15
VCL-206ENST00000623461 FSTP19883 344 aa7.89□□□□□ -1.15
VCL-206ENST00000623461 WDFY1Q8IWB7 410 aa7.89□□□□□ -1.15
VCL-206ENST00000623461 BHLHE23Q8NDY6 225 aa7.89□□□□□ -1.15
VCL-206ENST00000623461 TXNDC17Q9BRA2 123 aa7.89□□□□□ -1.15
VCL-206ENST00000623461 MYOZ1Q9NP98 299 aaPredicted RBP7.89□□□□□ -1.15
VCL-206ENST00000623461 MCM3APO60318 1980 aa7.89□□□□□ -1.15
VCL-206ENST00000623461 PLPP3O14495 311 aa7.89□□□□□ -1.15
VCL-206ENST00000623461 KCNAB3O43448 404 aa7.89□□□□□ -1.15
VCL-206ENST00000623461 TRGC1P0CF51 173 aa7.89□□□□□ -1.15
VCL-206ENST00000623461 ST6GAL1P15907 406 aa7.89□□□□□ -1.15
VCL-206ENST00000623461 TRAT1Q6PIZ9 186 aa7.89□□□□□ -1.15
VCL-206ENST00000623461 PTPMT1Q8WUK0 201 aaPredicted RBP7.89□□□□□ -1.15
VCL-206ENST00000623461 BCL2L2Q92843 193 aaPredicted RBP7.89□□□□□ -1.15
VCL-206ENST00000623461 UTP23Q9BRU9 249 aaKnown RBP7.89□□□□□ -1.15
VCL-206ENST00000623461 ZBP1Q9H171 429 aa7.89□□□□□ -1.15
VCL-206ENST00000623461 TGIF2-C20orf24A0A0A6YYL0 155 aa7.89□□□□□ -1.15
VCL-206ENST00000623461 IFITM10A6NMD0 228 aa7.89□□□□□ -1.15
VCL-206ENST00000623461 Q1RN00 199 aa7.89□□□□□ -1.15
VCL-206ENST00000623461 OR1L4Q8NGR5 311 aa7.89□□□□□ -1.15
VCL-206ENST00000623461 TPSD1Q9BZJ3 242 aa7.89□□□□□ -1.15
VCL-206ENST00000623461 HCSTQ9UBK5 93 aa7.89□□□□□ -1.15
VCL-206ENST00000623461 TRPM6Q9BX84 2022 aa7.89□□□□□ -1.15
VCL-206ENST00000623461 EFNB2P52799 333 aa7.89□□□□□ -1.15
VCL-206ENST00000623461 C5orf49A4QMS7 147 aa7.89□□□□□ -1.15
VCL-206ENST00000623461 ISLRO14498 428 aa7.89□□□□□ -1.15
VCL-206ENST00000623461 CNEP1R1Q8N9A8 125 aa7.89□□□□□ -1.15
VCL-206ENST00000623461 RER1O15258 196 aa7.88□□□□□ -1.15
VCL-206ENST00000623461 FAM87AP0C7U9 286 aa7.88□□□□□ -1.15
VCL-206ENST00000623461 CDAP32320 146 aa7.88□□□□□ -1.15
VCL-206ENST00000623461 IER3P46695 156 aa7.88□□□□□ -1.15
VCL-206ENST00000623461 TMEM178AQ8NBL3 297 aa7.88□□□□□ -1.15
VCL-206ENST00000623461 TECRQ9NZ01 308 aaKnown RBP7.88□□□□□ -1.15
VCL-206ENST00000623461 CISD1Q9NZ45 108 aaKnown RBP7.88□□□□□ -1.15
VCL-206ENST00000623461 TRBV5-5A0A0J9YX44 114 aa7.88□□□□□ -1.15
VCL-206ENST00000623461 PAGE4O60829 102 aa7.88□□□□□ -1.15
VCL-206ENST00000623461 CXorf1O96002 111 aa7.88□□□□□ -1.15
VCL-206ENST00000623461 DANCRP0C864 163 aa7.88□□□□□ -1.15
VCL-206ENST00000623461 GLRX5Q86SX6 157 aa7.88□□□□□ -1.15
VCL-206ENST00000623461 APOBEC3DQ96AK3 386 aaPredicted RBP7.88□□□□□ -1.15
VCL-206ENST00000623461 GPA33Q99795 319 aa7.88□□□□□ -1.15
VCL-206ENST00000623461 ANKRD10Q9NXR5 420 aa7.88□□□□□ -1.15
VCL-206ENST00000623461 NPTNQ9Y639 398 aa7.88□□□□□ -1.15
VCL-206ENST00000623461 UNC13CQ8NB66 2214 aa7.88□□□□□ -1.15
VCL-206ENST00000623461 ATG2BQ96BY7 2078 aa7.88□□□□□ -1.15
VCL-206ENST00000623461 TMEM211Q6ICI0 200 aa7.88□□□□□ -1.15
VCL-206ENST00000623461 PGLYRP3Q96LB9 341 aa7.88□□□□□ -1.15
VCL-206ENST00000623461 UBE2CO00762 179 aa7.88□□□□□ -1.15
VCL-206ENST00000623461 IGFBP6P24592 240 aaPredicted RBP7.88□□□□□ -1.15
VCL-206ENST00000623461 PLP1P60201 277 aa7.88□□□□□ -1.15
VCL-206ENST00000623461 FOXF1Q12946 379 aa7.88□□□□□ -1.15
VCL-206ENST00000623461 GAMTQ14353 236 aa7.88□□□□□ -1.15
VCL-206ENST00000623461 LYZL2Q7Z4W2 148 aa7.88□□□□□ -1.15
VCL-206ENST00000623461 TOX2Q96NM4 488 aa7.88□□□□□ -1.15
VCL-206ENST00000623461 OR6C1Q96RD1 312 aa7.88□□□□□ -1.15
VCL-206ENST00000623461 CDC42EP3Q9UKI2 254 aa7.88□□□□□ -1.15
VCL-206ENST00000623461 SLC25A5P05141 298 aaKnown RBP7.88□□□□□ -1.15
VCL-206ENST00000623461 CSRP3P50461 194 aa7.88□□□□□ -1.15
VCL-206ENST00000623461 LGALS4P56470 323 aa7.88□□□□□ -1.15
VCL-206ENST00000623461 MESTQ5EB52 335 aa7.88□□□□□ -1.15
VCL-206ENST00000623461 UNQ9370/PRO34162Q6UXP9 181 aa7.88□□□□□ -1.15
VCL-206ENST00000623461 RSPO2Q6UXX9 243 aaPredicted RBP7.88□□□□□ -1.15
VCL-206ENST00000623461 AMER3Q8N944 861 aa7.88□□□□□ -1.15
VCL-206ENST00000623461 SLC7A10Q9NS82 523 aa7.88□□□□□ -1.15
VCL-206ENST00000623461 CBLN4Q9NTU7 201 aa7.88□□□□□ -1.15
VCL-206ENST00000623461 GPR132Q9UNW8 380 aa7.88□□□□□ -1.15
VCL-206ENST00000623461 PARP14Q460N5 1801 aa7.88□□□□□ -1.15
VCL-206ENST00000623461 CEACAM6P40199 344 aa7.88□□□□□ -1.15
VCL-206ENST00000623461 ADPRHP54922 357 aa7.88□□□□□ -1.15
VCL-206ENST00000623461 ZP1P60852 638 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms