RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 DECR2Q9NUI1 292 aa13.63□□□□□ -0.23
NPHP4-211ENST00000622020 ZNF587BE7ETH6 402 aa13.62□□□□□ -0.23
NPHP4-211ENST00000622020 FOSL1P15407 271 aa13.62□□□□□ -0.23
NPHP4-211ENST00000622020 PAX6P26367 422 aa13.62□□□□□ -0.23
NPHP4-211ENST00000622020 VAMP2P63027 116 aa13.62□□□□□ -0.23
NPHP4-211ENST00000622020 MALLQ13021 153 aa13.62□□□□□ -0.23
NPHP4-211ENST00000622020 RHEBQ15382 184 aa13.62□□□□□ -0.23
NPHP4-211ENST00000622020 SLC23A3Q6PIS1 610 aa13.62□□□□□ -0.23
NPHP4-211ENST00000622020 WDR74Q6RFH5 385 aaPredicted RBP13.62□□□□□ -0.23
NPHP4-211ENST00000622020 COL6A3P12111 3177 aa13.62□□□□□ -0.23
NPHP4-211ENST00000622020 PROB1E7EW31 1015 aa13.62□□□□□ -0.23
NPHP4-211ENST00000622020 TP53I11O14683 189 aa13.62□□□□□ -0.23
NPHP4-211ENST00000622020 MPPED1O15442 326 aa13.62□□□□□ -0.23
NPHP4-211ENST00000622020 CYB5BO43169 146 aa13.62□□□□□ -0.23
NPHP4-211ENST00000622020 PPIHO43447 177 aaKnown RBP13.62□□□□□ -0.23
NPHP4-211ENST00000622020 TMEM50AO95807 157 aa13.62□□□□□ -0.23
NPHP4-211ENST00000622020 SCTP09683 121 aa13.62□□□□□ -0.23
NPHP4-211ENST00000622020 ERVFRD-1P60508 538 aa13.62□□□□□ -0.23
NPHP4-211ENST00000622020 DLK1P80370 383 aa13.62□□□□□ -0.23
NPHP4-211ENST00000622020 IL13RA2Q14627 380 aa13.62□□□□□ -0.23
NPHP4-211ENST00000622020 PYY3Q5JQD4 70 aa13.62□□□□□ -0.23
NPHP4-211ENST00000622020 RTL6Q6ICC9 239 aa13.62□□□□□ -0.23
NPHP4-211ENST00000622020 SPNS3Q6ZMD2 512 aa13.62□□□□□ -0.23
NPHP4-211ENST00000622020 Q8WTZ3 238 aa13.62□□□□□ -0.23
NPHP4-211ENST00000622020 DOK5Q9P104 306 aa13.62□□□□□ -0.23
NPHP4-211ENST00000622020 IFITM10A6NMD0 228 aa13.61□□□□□ -0.23
NPHP4-211ENST00000622020 HLA-HP01893 362 aa13.61□□□□□ -0.23
NPHP4-211ENST00000622020 TCN2P20062 427 aa13.61□□□□□ -0.23
NPHP4-211ENST00000622020 OTX1P32242 354 aaPredicted RBP13.61□□□□□ -0.23
NPHP4-211ENST00000622020 CACNA1EQ15878 2313 aa13.61□□□□□ -0.23
NPHP4-211ENST00000622020 HEPN1Q6WQI6 88 aa13.61□□□□□ -0.23
NPHP4-211ENST00000622020 TUBA4BQ9H853 241 aa13.61□□□□□ -0.23
NPHP4-211ENST00000622020 BCO1Q9HAY6 547 aa13.61□□□□□ -0.23
NPHP4-211ENST00000622020 ARHGAP21Q5T5U3 1957 aa13.61□□□□□ -0.23
NPHP4-211ENST00000622020 GATCO43716 136 aaKnown RBP13.61□□□□□ -0.23
NPHP4-211ENST00000622020 ZIC3O60481 467 aa13.61□□□□□ -0.23
NPHP4-211ENST00000622020 CNN3Q15417 329 aaKnown RBP13.61□□□□□ -0.23
NPHP4-211ENST00000622020 ZNF429Q86V71 674 aa13.61□□□□□ -0.23
NPHP4-211ENST00000622020 GAPTQ8N292 157 aa13.61□□□□□ -0.23
NPHP4-211ENST00000622020 TMEM252Q8N6L7 170 aa13.61□□□□□ -0.23
NPHP4-211ENST00000622020 FADS6Q8N9I5 356 aa13.61□□□□□ -0.23
NPHP4-211ENST00000622020 OR1F12Q8NHA8 337 aa13.61□□□□□ -0.23
NPHP4-211ENST00000622020 TMEM54Q969K7 222 aa13.61□□□□□ -0.23
NPHP4-211ENST00000622020 MOB3AQ96BX8 217 aa13.61□□□□□ -0.23
NPHP4-211ENST00000622020 HSF4Q9ULV5 492 aa13.61□□□□□ -0.23
NPHP4-211ENST00000622020 STRAPQ9Y3F4 350 aaKnown RBP13.61□□□□□ -0.23
NPHP4-211ENST00000622020 AHCTF1Q8WYP5 2266 aa13.61□□□□□ -0.23
NPHP4-211ENST00000622020 TERTO14746 1132 aaKnown RBP13.61□□□□□ -0.23
NPHP4-211ENST00000622020 GPX4P36969 197 aaPredicted RBP13.61□□□□□ -0.23
NPHP4-211ENST00000622020 C10orf128Q5T292 105 aa13.61□□□□□ -0.23
NPHP4-211ENST00000622020 SPSB3Q6PJ21 355 aa13.61□□□□□ -0.23
NPHP4-211ENST00000622020 ZNF818PQ6ZRF7 136 aa13.61□□□□□ -0.23
NPHP4-211ENST00000622020 COMMD1Q8N668 190 aa13.61□□□□□ -0.23
NPHP4-211ENST00000622020 ZNF611Q8N823 705 aa13.61□□□□□ -0.23
NPHP4-211ENST00000622020 OR4D5Q8NGN0 318 aa13.61□□□□□ -0.23
NPHP4-211ENST00000622020 OR10D4PQ8NGN7 298 aa13.61□□□□□ -0.23
NPHP4-211ENST00000622020 SPSB1Q96BD6 273 aa13.61□□□□□ -0.23
NPHP4-211ENST00000622020 TMPRSS5Q9H3S3 457 aa13.61□□□□□ -0.23
NPHP4-211ENST00000622020 R4GN57 208 aa13.61□□□□□ -0.23
NPHP4-211ENST00000622020 IGHV5-10-1A0A0J9YXX1 117 aa13.6□□□□□ -0.23
NPHP4-211ENST00000622020 TRGC2P03986 189 aa13.6□□□□□ -0.23
NPHP4-211ENST00000622020 UCP2P55851 309 aa13.6□□□□□ -0.23
NPHP4-211ENST00000622020 PSG4Q00888 419 aa13.6□□□□□ -0.23
NPHP4-211ENST00000622020 SLC25A24Q6NUK1 477 aa13.6□□□□□ -0.23
NPHP4-211ENST00000622020 LILRB2Q8N423 598 aa13.6□□□□□ -0.23
NPHP4-211ENST00000622020 CCDC74BQ96LY2 380 aa13.6□□□□□ -0.23
NPHP4-211ENST00000622020 TCEAL7Q9BRU2 100 aa13.6□□□□□ -0.23
NPHP4-211ENST00000622020 IGLV3-32A0A0A0MS00 114 aa13.6□□□□□ -0.23
NPHP4-211ENST00000622020 IGKV1D-13A0A0B4J2D9 117 aa13.6□□□□□ -0.23
NPHP4-211ENST00000622020 ZFP92A6NM28 416 aa13.6□□□□□ -0.23
NPHP4-211ENST00000622020 CHST1O43916 411 aa13.6□□□□□ -0.23
NPHP4-211ENST00000622020 IGKV1-13P0DP09 117 aa13.6□□□□□ -0.23
NPHP4-211ENST00000622020 DTYMKP23919 212 aa13.6□□□□□ -0.23
NPHP4-211ENST00000622020 RAB30Q15771 203 aa13.6□□□□□ -0.23
NPHP4-211ENST00000622020 IGFBP7Q16270 282 aa13.6□□□□□ -0.23
NPHP4-211ENST00000622020 UBALD1Q8TB05 177 aa13.6□□□□□ -0.23
NPHP4-211ENST00000622020 RNF138Q8WVD3 245 aa13.6□□□□□ -0.23
NPHP4-211ENST00000622020 MUCL1Q96DR8 90 aa13.6□□□□□ -0.23
NPHP4-211ENST00000622020 PTRH2Q9Y3E5 179 aaKnown RBP13.6□□□□□ -0.23
NPHP4-211ENST00000622020 HS3ST3B1Q9Y662 390 aa13.6□□□□□ -0.23
NPHP4-211ENST00000622020 A0A0G2JMM0 328 aa13.59□□□□□ -0.23
NPHP4-211ENST00000622020 A0A1W2PPB8 328 aa13.59□□□□□ -0.23
NPHP4-211ENST00000622020 A0A1W2PRS3 328 aa13.59□□□□□ -0.23
NPHP4-211ENST00000622020 KIR3DP1A8MWS1 328 aa13.59□□□□□ -0.23
NPHP4-211ENST00000622020 WRBO00258 174 aa13.59□□□□□ -0.23
NPHP4-211ENST00000622020 SYNGR3O43761 229 aa13.59□□□□□ -0.23
NPHP4-211ENST00000622020 TRAPPC6AO75865 159 aa13.59□□□□□ -0.23
NPHP4-211ENST00000622020 FGF8P55075 233 aaPredicted RBP13.59□□□□□ -0.23
NPHP4-211ENST00000622020 FAM27BQ5VT28 67 aa13.59□□□□□ -0.23
NPHP4-211ENST00000622020 ZNF383Q8NA42 475 aa13.59□□□□□ -0.23
NPHP4-211ENST00000622020 GPR61Q9BZJ8 451 aa13.59□□□□□ -0.23
NPHP4-211ENST00000622020 CCL28Q9NRJ3 127 aa13.59□□□□□ -0.23
NPHP4-211ENST00000622020 GNG13Q9P2W3 67 aa13.59□□□□□ -0.23
NPHP4-211ENST00000622020 TMED3Q9Y3Q3 217 aa13.59□□□□□ -0.23
NPHP4-211ENST00000622020 ASPMQ8IZT6 3477 aa13.59□□□□□ -0.23
NPHP4-211ENST00000622020 A0A1B0GV90 55 aa13.59□□□□□ -0.23
NPHP4-211ENST00000622020 PDCD6O75340 191 aa13.59□□□□□ -0.23
NPHP4-211ENST00000622020 S100A2P29034 98 aa13.59□□□□□ -0.23
NPHP4-211ENST00000622020 RAB5CP51148 216 aa13.59□□□□□ -0.23
NPHP4-211ENST00000622020 RPL23AP62750 156 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms