RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 RFPL4AL1F8VTS6 287 aa9.99□□□□□ -0.81
CLIP1-219ENST00000620786 MMP7P09237 267 aaPredicted RBP9.99□□□□□ -0.81
CLIP1-219ENST00000620786 APELAP0DMC3 54 aa9.99□□□□□ -0.81
CLIP1-219ENST00000620786 GZMHP20718 246 aa9.99□□□□□ -0.81
CLIP1-219ENST00000620786 TIAL1Q01085 375 aaKnown RBP eCLIP9.99□□□□□ -0.81
CLIP1-219ENST00000620786 COL10A1Q03692 680 aa9.99□□□□□ -0.81
CLIP1-219ENST00000620786 ZNF658BQ4V348 819 aaPredicted RBP9.99□□□□□ -0.81
CLIP1-219ENST00000620786 PDZD11Q5EBL8 140 aa9.99□□□□□ -0.81
CLIP1-219ENST00000620786 WFDC3Q8IUB2 231 aa9.99□□□□□ -0.81
CLIP1-219ENST00000620786 TEX29Q8N6K0 151 aa9.99□□□□□ -0.81
CLIP1-219ENST00000620786 OR5M8Q8NGP6 311 aa9.99□□□□□ -0.81
CLIP1-219ENST00000620786 NUP205Q92621 2012 aa9.99□□□□□ -0.81
CLIP1-219ENST00000620786 ZNF385AQ96PM9 386 aaKnown RBP9.99□□□□□ -0.81
CLIP1-219ENST00000620786 SRRQ9GZT4 340 aa9.99□□□□□ -0.81
CLIP1-219ENST00000620786 J3KRW8 73 aa9.98□□□□□ -0.81
CLIP1-219ENST00000620786 B3GALNT1O75752 331 aa9.98□□□□□ -0.81
CLIP1-219ENST00000620786 FUCA1P04066 466 aa9.98□□□□□ -0.81
CLIP1-219ENST00000620786 DHRS7BQ6IAN0 325 aaPredicted RBP9.98□□□□□ -0.81
CLIP1-219ENST00000620786 GLDNQ6ZMI3 551 aaPredicted RBP9.98□□□□□ -0.81
CLIP1-219ENST00000620786 TBC1D26Q86UD7 250 aa9.98□□□□□ -0.81
CLIP1-219ENST00000620786 OR10AC1Q8NH08 325 aa9.98□□□□□ -0.81
CLIP1-219ENST00000620786 FLYWCH2Q96CP2 140 aaKnown RBP9.98□□□□□ -0.81
CLIP1-219ENST00000620786 WDR13Q9H1Z4 485 aa9.98□□□□□ -0.81
CLIP1-219ENST00000620786 SLC52A3Q9NQ40 469 aa9.98□□□□□ -0.81
CLIP1-219ENST00000620786 CISD1Q9NZ45 108 aaKnown RBP9.98□□□□□ -0.81
CLIP1-219ENST00000620786 CCDC144NLQ6NUI1 221 aa9.98□□□□□ -0.81
CLIP1-219ENST00000620786 RBPMS2Q6ZRY4 209 aaKnown RBP9.98□□□□□ -0.81
CLIP1-219ENST00000620786 DOLPP1Q86YN1 238 aa9.98□□□□□ -0.81
CLIP1-219ENST00000620786 ACP1P24666 158 aa9.98□□□□□ -0.81
CLIP1-219ENST00000620786 CTSSP25774 331 aa9.98□□□□□ -0.81
CLIP1-219ENST00000620786 KCNMB1Q16558 191 aa9.98□□□□□ -0.81
CLIP1-219ENST00000620786 C11orf87Q6NUJ2 197 aa9.98□□□□□ -0.81
CLIP1-219ENST00000620786 CCL19Q99731 98 aa9.98□□□□□ -0.81
CLIP1-219ENST00000620786 NUDT16L1Q9BRJ7 211 aaKnown RBP9.98□□□□□ -0.81
CLIP1-219ENST00000620786 ASCL3Q9NQ33 180 aa9.98□□□□□ -0.81
CLIP1-219ENST00000620786 SMCHD1A6NHR9 2005 aa9.98□□□□□ -0.81
CLIP1-219ENST00000620786 ATAD5Q96QE3 1844 aa9.98□□□□□ -0.81
CLIP1-219ENST00000620786 OR4D10Q8NGI6 311 aa9.98□□□□□ -0.81
CLIP1-219ENST00000620786 NTNG2Q96CW9 530 aa9.98□□□□□ -0.81
CLIP1-219ENST00000620786 RAB18Q9NP72 206 aa9.98□□□□□ -0.81
CLIP1-219ENST00000620786 ANKRD31Q8N7Z5 1873 aa9.98□□□□□ -0.81
CLIP1-219ENST00000620786 TXNDC12O95881 172 aa9.98□□□□□ -0.81
CLIP1-219ENST00000620786 FOSL1P15407 271 aa9.98□□□□□ -0.81
CLIP1-219ENST00000620786 AMTP48728 403 aa9.98□□□□□ -0.81
CLIP1-219ENST00000620786 ERVFRD-1P60508 538 aa9.98□□□□□ -0.81
CLIP1-219ENST00000620786 CSRP2Q16527 193 aa9.98□□□□□ -0.81
CLIP1-219ENST00000620786 FA2HQ7L5A8 372 aa9.98□□□□□ -0.81
CLIP1-219ENST00000620786 TMEM74BQ9NUR3 256 aa9.98□□□□□ -0.81
CLIP1-219ENST00000620786 HMGA2P52926 109 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 PJVKQ0ZLH3 352 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 TSPO2Q5TGU0 170 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 OR4D11Q8NGI4 311 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 OR5A2Q8NGI9 324 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 RABAC1Q9UI14 185 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 FOCADQ5VW36 1801 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 A0A0J9YW62 118 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 GALP22466 123 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 ACAA2P42765 397 aaKnown RBP9.97□□□□□ -0.81
CLIP1-219ENST00000620786 PAFAH1B2P68402 229 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 PDZK1IP1Q13113 114 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 PPP1R1AQ13522 171 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 OXA1LQ15070 435 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 MMDQ15546 238 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 GGNBP1Q5YKI7 109 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 CADM3Q8N126 398 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 GVQW1Q8N7I0 195 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 OR5C1Q8NGR4 320 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 SH2D2AQ9NP31 389 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 WIPI2Q9Y4P8 454 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 CRYBB2P43320 205 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 AESQ08117 197 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 C11orf42Q8N5U0 333 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 DUSP18Q8NEJ0 188 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 HARBI1Q96MB7 349 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 CABLES2Q9BTV7 478 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 ANGPTL4Q9BY76 406 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 RAB33BQ9H082 229 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 SLC2A8Q9NY64 477 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 PIPOXQ9P0Z9 390 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 C9orf170A2RU37 121 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 UPK3AO75631 287 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 NDUFB6O95139 128 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 RPS4XP62701 263 aaKnown RBP9.97□□□□□ -0.81
CLIP1-219ENST00000620786 C19orf57Q0VDD7 668 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 P2RY6Q15077 328 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 GABRA6Q16445 453 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 GPR137Q96N19 417 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 FRRS1LQ9P0K9 344 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 ZNF638Q14966 1978 aaKnown RBP9.97□□□□□ -0.81
CLIP1-219ENST00000620786 BRWD3Q6RI45 1802 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 FAM24AA6NFZ4 105 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 REG1BP48304 166 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 SCAND1P57086 179 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 LINC00052Q96N35 136 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 FOXJ2Q9P0K8 574 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 DLEC1Q9Y238 1755 aa9.97□□□□□ -0.81
CLIP1-219ENST00000620786 KIAA1217Q5T5P2 1943 aa9.96□□□□□ -0.81
CLIP1-219ENST00000620786 A0A1W2PPQ1 181 aa9.96□□□□□ -0.81
CLIP1-219ENST00000620786 VDAC1P21796 283 aa9.96□□□□□ -0.81
CLIP1-219ENST00000620786 GNG4P50150 75 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms