RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 GPX7Q96SL4 187 aaPredicted RBP4.45□□□□□ -1.7
VPS13D-214ENST00000620676 DEFB126Q9BYW3 111 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 SNURFLB1AK76 121 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 MELTFP08582 738 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 COX5AP20674 150 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 H1FNTQ75WM6 255 aaPredicted RBP4.45□□□□□ -1.7
VPS13D-214ENST00000620676 RNF133Q8WVZ7 376 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 MS4A6EQ96DS6 147 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 MVB12AQ96EY5 273 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 GALR3O60755 368 aaPredicted RBP4.45□□□□□ -1.7
VPS13D-214ENST00000620676 HIST1H1EP10412 219 aaKnown RBP4.45□□□□□ -1.7
VPS13D-214ENST00000620676 GCSHP23434 173 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 RING1Q06587 406 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 SPATA46Q5T0L3 261 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 ZPBPQ9BS86 351 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 TRIOBPQ9H2D6 2365 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 BCAT2O15382 392 aaPredicted RBP4.45□□□□□ -1.7
VPS13D-214ENST00000620676 DLEU1O43261 78 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 IRF2P14316 349 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 NTSR1P30989 418 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 BPIFB3P59826 476 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 ZNF718Q3SXZ3 478 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 CXorf66Q5JRM2 361 aaPredicted RBP4.45□□□□□ -1.7
VPS13D-214ENST00000620676 OR4A4PQ8NGN8 299 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 SRIP30626 198 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 PPICP45877 212 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 PLPPR5Q32ZL2 321 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 LCN12Q6JVE5 192 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 OR2A5Q96R48 311 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 MRPL13Q9BYD1 178 aaKnown RBP4.45□□□□□ -1.7
VPS13D-214ENST00000620676 BEX4Q9NWD9 120 aaPredicted RBP4.45□□□□□ -1.7
VPS13D-214ENST00000620676 SLC17A4Q9Y2C5 497 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 H3BUT2 72 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 OR2A4O95047 310 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 ABHD16AO95870 558 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 CCL2P13500 99 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 CDKN1AP38936 164 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 HMGA2P52926 109 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 LIMS2Q7Z4I7 341 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 OR2A7Q96R45 310 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 MAP1LC3CQ9BXW4 147 aa4.45□□□□□ -1.7
VPS13D-214ENST00000620676 ISG15P05161 165 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 ZBTB25P24278 435 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 SSBP1Q04837 148 aaKnown RBP4.44□□□□□ -1.7
VPS13D-214ENST00000620676 HIKESHIQ53FT3 197 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 KIAA0895LQ68EN5 471 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 SYS1Q8N2H4 156 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 NKAIN3Q8N8D7 197 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 OR4X1Q8NH49 305 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 NEU1Q99519 415 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 SNHG12Q9BXW3 62 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 CHST5Q9GZS9 411 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 CLEC5AQ9NY25 188 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 CACNA1DQ01668 2161 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 A0A1B0GWJ7 208 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 ZNF345Q14585 488 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 SLC25A26Q70HW3 274 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 OR5R1Q8NH85 324 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 HSPB7Q9UBY9 170 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 KCNE5Q9UJ90 142 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 MUC21A0A0G2JKD1 596 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 MUC21A0A140T8X8 626 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 OGG1O15527 345 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 DEDDO75618 318 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 PAFAH1B2P68402 229 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 MUC21Q5SSG8 566 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 ADAMTS17Q8TE56 1095 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 CNRIP1Q96F85 164 aaPredicted RBP4.44□□□□□ -1.7
VPS13D-214ENST00000620676 PGLYRP4Q96LB8 373 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 TSPAN32Q96QS1 320 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 SLX4Q8IY92 1834 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 LOC107984156A0A0G2JMH3 177 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 TRA2BP62995 288 aaKnown RBP4.44□□□□□ -1.7
VPS13D-214ENST00000620676 C17orf99Q6UX52 265 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 ARL17AQ8IVW1 177 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 GAPTQ8N292 157 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 RAB24Q969Q5 203 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 SGK494Q96LW2 274 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 C19orf25Q9UFG5 118 aaPredicted RBP4.44□□□□□ -1.7
VPS13D-214ENST00000620676 VAX2Q9UIW0 290 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 A0A1W2PP11 408 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 PRSS1P07477 247 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 BCL2P10415 239 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 HIST1H1DP16402 221 aaKnown RBP4.44□□□□□ -1.7
VPS13D-214ENST00000620676 FUT7Q11130 342 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 NUFIP2Q7Z417 695 aaKnown RBP4.44□□□□□ -1.7
VPS13D-214ENST00000620676 SLC35E3Q7Z769 313 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 NUP214P35658 2090 aaPredicted RBP4.44□□□□□ -1.7
VPS13D-214ENST00000620676 SMIM13P0DJ93 91 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 P2RY1P47900 373 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 WDFY1Q8IWB7 410 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 NPEPL1Q8NDH3 523 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 RTN4RQ9BZR6 473 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 CHRNA10Q9GZZ6 450 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 HCRTR1O43613 425 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 RHBDD2Q6NTF9 364 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 C1QL4Q86Z23 238 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 FAM169BQ8N8A8 192 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 HS3ST3B1Q9Y662 390 aa4.44□□□□□ -1.7
VPS13D-214ENST00000620676 DICER1Q9UPY3 1922 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms