RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 DPPA3Q6W0C5 159 aa11.27□□□□□ -0.61
SKP2-209ENST00000620197 OR1F12Q8NHA8 337 aa11.27□□□□□ -0.61
SKP2-209ENST00000620197 MR1Q95460 341 aa11.27□□□□□ -0.61
SKP2-209ENST00000620197 TOMM40LQ969M1 308 aa11.27□□□□□ -0.61
SKP2-209ENST00000620197 REPIN1Q9BWE0 567 aaKnown RBP11.27□□□□□ -0.61
SKP2-209ENST00000620197 TOLLIPQ9H0E2 274 aa11.27□□□□□ -0.61
SKP2-209ENST00000620197 BCO1Q9HAY6 547 aa11.27□□□□□ -0.61
SKP2-209ENST00000620197 TMEM38BQ9NVV0 291 aa11.27□□□□□ -0.61
SKP2-209ENST00000620197 FBXO7Q9Y3I1 522 aa11.27□□□□□ -0.61
SKP2-209ENST00000620197 RTTNQ86VV8 2226 aa11.27□□□□□ -0.61
SKP2-209ENST00000620197 KMT2EQ8IZD2 1858 aa11.27□□□□□ -0.61
SKP2-209ENST00000620197 IGHV1-45A0A0A0MS14 117 aa11.27□□□□□ -0.61
SKP2-209ENST00000620197 IGHV5-10-1A0A0J9YXX1 117 aa11.27□□□□□ -0.61
SKP2-209ENST00000620197 NKX2-6A6NCS4 301 aa11.27□□□□□ -0.61
SKP2-209ENST00000620197 HSPB1P04792 205 aaKnown RBP11.27□□□□□ -0.61
SKP2-209ENST00000620197 UCP1P25874 307 aa11.27□□□□□ -0.61
SKP2-209ENST00000620197 GPX4P36969 197 aaPredicted RBP11.27□□□□□ -0.61
SKP2-209ENST00000620197 CDX1P47902 265 aaPredicted RBP11.27□□□□□ -0.61
SKP2-209ENST00000620197 TMEM182Q6ZP80 229 aaPredicted RBP11.27□□□□□ -0.61
SKP2-209ENST00000620197 TECTBQ96PL2 329 aa11.27□□□□□ -0.61
SKP2-209ENST00000620197 KCNJ16Q9NPI9 418 aa11.27□□□□□ -0.61
SKP2-209ENST00000620197 SHANK1Q9Y566 2161 aa11.26□□□□□ -0.61
SKP2-209ENST00000620197 ZNF716A6NP11 495 aa11.26□□□□□ -0.61
SKP2-209ENST00000620197 PAX9P55771 341 aa11.26□□□□□ -0.61
SKP2-209ENST00000620197 ABCA11PQ4W5N1 156 aa11.26□□□□□ -0.61
SKP2-209ENST00000620197 COLCA1Q6ZS62 124 aa11.26□□□□□ -0.61
SKP2-209ENST00000620197 ZNF700Q9H0M5 742 aa11.26□□□□□ -0.61
SKP2-209ENST00000620197 ZNF286AQ9HBT8 521 aa11.26□□□□□ -0.61
SKP2-209ENST00000620197 IGHV3-15A0A0B4J1V0 119 aa11.26□□□□□ -0.61
SKP2-209ENST00000620197 A0A0J9YW62 118 aa11.26□□□□□ -0.61
SKP2-209ENST00000620197 MED19A0JLT2 244 aaPredicted RBP11.26□□□□□ -0.61
SKP2-209ENST00000620197 ZNF266Q14584 549 aa11.26□□□□□ -0.61
SKP2-209ENST00000620197 GGNQ86UU5 652 aa11.26□□□□□ -0.61
SKP2-209ENST00000620197 ABCA7Q8IZY2 2146 aa11.26□□□□□ -0.61
SKP2-209ENST00000620197 HSD17B11Q8NBQ5 300 aa11.26□□□□□ -0.61
SKP2-209ENST00000620197 CLDND2Q8NHS1 167 aa11.26□□□□□ -0.61
SKP2-209ENST00000620197 PRDM13Q9H4Q3 707 aa11.26□□□□□ -0.61
SKP2-209ENST00000620197 PLEK2Q9NYT0 353 aa11.26□□□□□ -0.61
SKP2-209ENST00000620197 BRWD1Q9NSI6 2320 aa11.26□□□□□ -0.61
SKP2-209ENST00000620197 NPIPA2E9PIF3 369 aa11.26□□□□□ -0.61
SKP2-209ENST00000620197 H3BQ15 152 aa11.26□□□□□ -0.61
SKP2-209ENST00000620197 WRBO00258 174 aa11.26□□□□□ -0.61
SKP2-209ENST00000620197 KLK3P07288 261 aaPredicted RBP11.26□□□□□ -0.61
SKP2-209ENST00000620197 RD3LP0DJH9 198 aa11.26□□□□□ -0.61
SKP2-209ENST00000620197 PAX1P15863 534 aa11.26□□□□□ -0.61
SKP2-209ENST00000620197 FUT6P51993 359 aa11.26□□□□□ -0.61
SKP2-209ENST00000620197 BAXQ07812 192 aa11.26□□□□□ -0.61
SKP2-209ENST00000620197 HERPUD1Q15011 391 aa11.26□□□□□ -0.61
SKP2-209ENST00000620197 C9orf152Q5JTZ5 239 aa11.26□□□□□ -0.61
SKP2-209ENST00000620197 ZNF774Q6NX45 483 aa11.26□□□□□ -0.61
SKP2-209ENST00000620197 TMEM252Q8N6L7 170 aa11.26□□□□□ -0.61
SKP2-209ENST00000620197 ZNF565Q8N9K5 539 aa11.26□□□□□ -0.61
SKP2-209ENST00000620197 CCDC71LQ8N9Z2 235 aa11.26□□□□□ -0.61
SKP2-209ENST00000620197 CPT1CQ8TCG5 803 aa11.26□□□□□ -0.61
SKP2-209ENST00000620197 Q8WTZ3 238 aa11.26□□□□□ -0.61
SKP2-209ENST00000620197 RAB39BQ96DA2 213 aa11.26□□□□□ -0.61
SKP2-209ENST00000620197 FGF23Q9GZV9 251 aaPredicted RBP11.26□□□□□ -0.61
SKP2-209ENST00000620197 PLEKHF2Q9H8W4 249 aa11.26□□□□□ -0.61
SKP2-209ENST00000620197 PHF1O43189 567 aaPredicted RBP11.25□□□□□ -0.61
SKP2-209ENST00000620197 SS18L1O75177 396 aaPredicted RBP11.25□□□□□ -0.61
SKP2-209ENST00000620197 OR2C1O95371 312 aa11.25□□□□□ -0.61
SKP2-209ENST00000620197 NRASP01111 189 aa11.25□□□□□ -0.61
SKP2-209ENST00000620197 UMODP07911 640 aa11.25□□□□□ -0.61
SKP2-209ENST00000620197 CXCL1P09341 107 aa11.25□□□□□ -0.61
SKP2-209ENST00000620197 TCN2P20062 427 aa11.25□□□□□ -0.61
SKP2-209ENST00000620197 AFF3P51826 1226 aaKnown RBP11.25□□□□□ -0.61
SKP2-209ENST00000620197 RAC1P63000 192 aa11.25□□□□□ -0.61
SKP2-209ENST00000620197 ABLIM2Q6H8Q1 611 aa11.25□□□□□ -0.61
SKP2-209ENST00000620197 IL22RA2Q969J5 263 aa11.25□□□□□ -0.61
SKP2-209ENST00000620197 ADGRG7Q96K78 797 aa11.25□□□□□ -0.61
SKP2-209ENST00000620197 WNT5BQ9H1J7 359 aa11.25□□□□□ -0.61
SKP2-209ENST00000620197 AKIRIN1Q9H9L7 192 aaPredicted RBP11.25□□□□□ -0.61
SKP2-209ENST00000620197 FAM230AA0A1W2PPH8 454 aa11.25□□□□□ -0.61
SKP2-209ENST00000620197 SCAF4O95104 1147 aaKnown RBP11.25□□□□□ -0.61
SKP2-209ENST00000620197 OR13C7P0DN81 318 aa11.25□□□□□ -0.61
SKP2-209ENST00000620197 CCL3P10147 92 aa11.25□□□□□ -0.61
SKP2-209ENST00000620197 COX6A1P12074 109 aa11.25□□□□□ -0.61
SKP2-209ENST00000620197 EDN3P14138 238 aa11.25□□□□□ -0.61
SKP2-209ENST00000620197 CDCP2Q5VXM1 449 aa11.25□□□□□ -0.61
SKP2-209ENST00000620197 FAM213BQ8TBF2 198 aa11.25□□□□□ -0.61
SKP2-209ENST00000620197 C1QTNF5Q9BXJ0 243 aa11.25□□□□□ -0.61
SKP2-209ENST00000620197 SIRT7Q9NRC8 400 aa11.25□□□□□ -0.61
SKP2-209ENST00000620197 C19orf25Q9UFG5 118 aaPredicted RBP11.25□□□□□ -0.61
SKP2-209ENST00000620197 ST3GAL6Q9Y274 331 aa11.25□□□□□ -0.61
SKP2-209ENST00000620197 FAM24AA6NFZ4 105 aa11.24□□□□□ -0.61
SKP2-209ENST00000620197 TP53I11O14683 189 aa11.24□□□□□ -0.61
SKP2-209ENST00000620197 IFNA17P01571 189 aa11.24□□□□□ -0.61
SKP2-209ENST00000620197 CELA2AP08217 269 aa11.24□□□□□ -0.61
SKP2-209ENST00000620197 MMP7P09237 267 aaPredicted RBP11.24□□□□□ -0.61
SKP2-209ENST00000620197 NPBWR2P48146 333 aa11.24□□□□□ -0.61
SKP2-209ENST00000620197 ERVFRD-1P60508 538 aa11.24□□□□□ -0.61
SKP2-209ENST00000620197 SOHLH1Q5JUK2 328 aa11.24□□□□□ -0.61
SKP2-209ENST00000620197 PRAMEF20Q5VT98 475 aa11.24□□□□□ -0.61
SKP2-209ENST00000620197 BRICD5Q6PL45 260 aa11.24□□□□□ -0.61
SKP2-209ENST00000620197 CALHM1Q8IU99 346 aa11.24□□□□□ -0.61
SKP2-209ENST00000620197 OR14L1PQ8NHC6 308 aa11.24□□□□□ -0.61
SKP2-209ENST00000620197 RBM24Q9BX46 236 aaKnown RBP11.24□□□□□ -0.61
SKP2-209ENST00000620197 ULBP2Q9BZM5 246 aa11.24□□□□□ -0.61
SKP2-209ENST00000620197 ELL3Q9HB65 397 aaPredicted RBP11.24□□□□□ -0.61
SKP2-209ENST00000620197 TAAR3PQ9P1P4 343 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms