RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 KLF10Q13118 480 aa7.9□□□□□ -1.14
SSX3-204ENST00000612497 PMS2P11Q13670 270 aa7.9□□□□□ -1.14
SSX3-204ENST00000612497 EBI3Q14213 229 aa7.9□□□□□ -1.14
SSX3-204ENST00000612497 METTL21CQ5VZV1 264 aa7.9□□□□□ -1.14
SSX3-204ENST00000612497 TMEM42Q69YG0 159 aa7.9□□□□□ -1.14
SSX3-204ENST00000612497 SLC25A26Q70HW3 274 aa7.9□□□□□ -1.14
SSX3-204ENST00000612497 OR2T10Q8NGZ9 312 aa7.9□□□□□ -1.14
SSX3-204ENST00000612497 HAVCR2Q8TDQ0 301 aa7.9□□□□□ -1.14
SSX3-204ENST00000612497 TLCD1Q96CP7 247 aa7.9□□□□□ -1.14
SSX3-204ENST00000612497 NABP2Q9BQ15 211 aa7.9□□□□□ -1.14
SSX3-204ENST00000612497 ELOVL1Q9BW60 279 aa7.9□□□□□ -1.14
SSX3-204ENST00000612497 OR51V1Q9H2C8 321 aa7.9□□□□□ -1.14
SSX3-204ENST00000612497 SEBOXQ9HB31 216 aaPredicted RBP7.9□□□□□ -1.14
SSX3-204ENST00000612497 FAM206AQ9NX38 181 aa7.9□□□□□ -1.14
SSX3-204ENST00000612497 STUB1Q9UNE7 303 aa7.9□□□□□ -1.14
SSX3-204ENST00000612497 BAIAP2Q9UQB8 552 aa7.9□□□□□ -1.14
SSX3-204ENST00000612497 WSB1Q9Y6I7 421 aa7.9□□□□□ -1.14
SSX3-204ENST00000612497 CEPT1Q9Y6K0 416 aa7.9□□□□□ -1.14
SSX3-204ENST00000612497 V9GYQ6 96 aa7.9□□□□□ -1.14
SSX3-204ENST00000612497 IGHV4OR15-8A0A075B7B6 117 aa7.89□□□□□ -1.15
SSX3-204ENST00000612497 A0A087WW49 117 aa7.89□□□□□ -1.15
SSX3-204ENST00000612497 ODAMA1E959 279 aa7.89□□□□□ -1.15
SSX3-204ENST00000612497 ZNF729A6NN14 1252 aaPredicted RBP7.89□□□□□ -1.15
SSX3-204ENST00000612497 IGLV1-51P01701 117 aa7.89□□□□□ -1.15
SSX3-204ENST00000612497 IGLV3-1P01715 115 aa7.89□□□□□ -1.15
SSX3-204ENST00000612497 IGF1P05019 195 aa7.89□□□□□ -1.15
SSX3-204ENST00000612497 CALCBP10092 127 aa7.89□□□□□ -1.15
SSX3-204ENST00000612497 REG1BP48304 166 aa7.89□□□□□ -1.15
SSX3-204ENST00000612497 GNG10P50151 68 aa7.89□□□□□ -1.15
SSX3-204ENST00000612497 RAB9AP51151 201 aa7.89□□□□□ -1.15
SSX3-204ENST00000612497 BNIP1Q12981 228 aa7.89□□□□□ -1.15
SSX3-204ENST00000612497 MAPRE2Q15555 327 aa7.89□□□□□ -1.15
SSX3-204ENST00000612497 C17orf58Q2M2W7 97 aa7.89□□□□□ -1.15
SSX3-204ENST00000612497 ARPINQ7Z6K5 226 aa7.89□□□□□ -1.15
SSX3-204ENST00000612497 GTSCR1Q86UQ5 136 aa7.89□□□□□ -1.15
SSX3-204ENST00000612497 Q8N6K4 173 aa7.89□□□□□ -1.15
SSX3-204ENST00000612497 OR2T33Q8NG76 320 aa7.89□□□□□ -1.15
SSX3-204ENST00000612497 OR10X1Q8NGY0 326 aa7.89□□□□□ -1.15
SSX3-204ENST00000612497 DYDC1Q8WWB3 177 aa7.89□□□□□ -1.15
SSX3-204ENST00000612497 KIRREL1Q96J84 757 aa7.89□□□□□ -1.15
SSX3-204ENST00000612497 S1PR3Q99500 378 aa7.89□□□□□ -1.15
SSX3-204ENST00000612497 RBFOX1Q9NWB1 397 aaKnown RBP7.89□□□□□ -1.15
SSX3-204ENST00000612497 PSG11Q9UQ72 335 aa7.89□□□□□ -1.15
SSX3-204ENST00000612497 IGHV1-3A0A0C4DH29 117 aa7.88□□□□□ -1.15
SSX3-204ENST00000612497 KBTBD11-OT1A0A1B0GTJ5 212 aa7.88□□□□□ -1.15
SSX3-204ENST00000612497 NUPR2A6NF83 97 aa7.88□□□□□ -1.15
SSX3-204ENST00000612497 G3V318 75 aa7.88□□□□□ -1.15
SSX3-204ENST00000612497 NME4O00746 187 aa7.88□□□□□ -1.15
SSX3-204ENST00000612497 HSD17B6O14756 317 aa7.88□□□□□ -1.15
SSX3-204ENST00000612497 PRKACAP17612 351 aa7.88□□□□□ -1.15
SSX3-204ENST00000612497 RRM2P31350 389 aa7.88□□□□□ -1.15
SSX3-204ENST00000612497 CDC42P60953 191 aa7.88□□□□□ -1.15
SSX3-204ENST00000612497 PRR20EP86478 221 aa7.88□□□□□ -1.15
SSX3-204ENST00000612497 PRR20CP86479 221 aa7.88□□□□□ -1.15
SSX3-204ENST00000612497 PRR20DP86480 221 aa7.88□□□□□ -1.15
SSX3-204ENST00000612497 PRR20BP86481 221 aa7.88□□□□□ -1.15
SSX3-204ENST00000612497 PRR20AP86496 221 aa7.88□□□□□ -1.15
SSX3-204ENST00000612497 LTC4SQ16873 150 aa7.88□□□□□ -1.15
SSX3-204ENST00000612497 KRBOX4Q5JUW0 171 aa7.88□□□□□ -1.15
SSX3-204ENST00000612497 RASSF6Q6ZTQ3 369 aa7.88□□□□□ -1.15
SSX3-204ENST00000612497 Q8IYB0 196 aa7.88□□□□□ -1.15
SSX3-204ENST00000612497 IZUMO1Q8IYV9 350 aa7.88□□□□□ -1.15
SSX3-204ENST00000612497 FAM58AQ8N1B3 248 aa7.88□□□□□ -1.15
SSX3-204ENST00000612497 OR9Q2Q8NGE9 314 aa7.88□□□□□ -1.15
SSX3-204ENST00000612497 RCN3Q96D15 328 aa7.88□□□□□ -1.15
SSX3-204ENST00000612497 KCTD14Q9BQ13 255 aaPredicted RBP7.88□□□□□ -1.15
SSX3-204ENST00000612497 CHCHD6Q9BRQ6 235 aa7.88□□□□□ -1.15
SSX3-204ENST00000612497 TOLLIPQ9H0E2 274 aa7.88□□□□□ -1.15
SSX3-204ENST00000612497 PLSCR3Q9NRY6 295 aa7.88□□□□□ -1.15
SSX3-204ENST00000612497 LAMP5Q9UJQ1 280 aa7.88□□□□□ -1.15
SSX3-204ENST00000612497 GTF2A1LQ9UNN4 478 aa7.88□□□□□ -1.15
SSX3-204ENST00000612497 SAMD4AQ9UPU9 718 aaKnown RBP7.88□□□□□ -1.15
SSX3-204ENST00000612497 MRPS28Q9Y2Q9 187 aaKnown RBP7.88□□□□□ -1.15
SSX3-204ENST00000612497 V9GYY5 206 aaPredicted RBP7.88□□□□□ -1.15
SSX3-204ENST00000612497 IGKV1-27A0A075B6S5 117 aa7.87□□□□□ -1.15
SSX3-204ENST00000612497 SH2D1BO14796 132 aa7.87□□□□□ -1.15
SSX3-204ENST00000612497 ENTPD6O75354 484 aa7.87□□□□□ -1.15
SSX3-204ENST00000612497 SOX14O95416 240 aa7.87□□□□□ -1.15
SSX3-204ENST00000612497 OR2H2O95918 312 aa7.87□□□□□ -1.15
SSX3-204ENST00000612497 IGLV1-40P01703 118 aa7.87□□□□□ -1.15
SSX3-204ENST00000612497 TTRP02766 147 aa7.87□□□□□ -1.15
SSX3-204ENST00000612497 GAPDHP04406 335 aaKnown RBP7.87□□□□□ -1.15
SSX3-204ENST00000612497 MED14OSP0DP75 135 aa7.87□□□□□ -1.15
SSX3-204ENST00000612497 PPIFP30405 207 aaKnown RBP7.87□□□□□ -1.15
SSX3-204ENST00000612497 NPBWR2P48146 333 aa7.87□□□□□ -1.15
SSX3-204ENST00000612497 HCCSP53701 268 aa7.87□□□□□ -1.15
SSX3-204ENST00000612497 SCN1BQ07699 218 aa7.87□□□□□ -1.15
SSX3-204ENST00000612497 MFGE8Q08431 387 aaPredicted RBP7.87□□□□□ -1.15
SSX3-204ENST00000612497 SF3A3Q12874 501 aaKnown RBP eCLIP7.87□□□□□ -1.15
SSX3-204ENST00000612497 ZNF146Q15072 292 aa7.87□□□□□ -1.15
SSX3-204ENST00000612497 SPIN3Q5JUX0 258 aa7.87□□□□□ -1.15
SSX3-204ENST00000612497 MROQ9BYG7 248 aa7.87□□□□□ -1.15
SSX3-204ENST00000612497 TMBIM4Q9HC24 238 aa7.87□□□□□ -1.15
SSX3-204ENST00000612497 EXOSC4Q9NPD3 245 aaKnown RBP7.87□□□□□ -1.15
SSX3-204ENST00000612497 CMC2Q9NRP2 79 aa7.87□□□□□ -1.15
SSX3-204ENST00000612497 KRT84Q9NSB2 600 aa7.87□□□□□ -1.15
SSX3-204ENST00000612497 ARMC1Q9NVT9 282 aa7.87□□□□□ -1.15
SSX3-204ENST00000612497 OR6C3Q9NZP0 311 aa7.87□□□□□ -1.15
SSX3-204ENST00000612497 NUFIP1Q9UHK0 495 aaKnown RBP7.87□□□□□ -1.15
SSX3-204ENST00000612497 ZNF107Q9UII5 783 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms