RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 RHBDL1O75783 438 aa12.07□□□□□ -0.48
PCDHGA3-202ENST00000612467 IL18BPO95998 194 aa12.07□□□□□ -0.48
PCDHGA3-202ENST00000612467 IGKV1-13P0DP09 117 aa12.07□□□□□ -0.48
PCDHGA3-202ENST00000612467 ERVS71-1P61550 626 aa12.07□□□□□ -0.48
PCDHGA3-202ENST00000612467 ZNF169Q14929 603 aaPredicted RBP12.07□□□□□ -0.48
PCDHGA3-202ENST00000612467 HERPUD1Q15011 391 aa12.07□□□□□ -0.48
PCDHGA3-202ENST00000612467 RTL6Q6ICC9 239 aa12.07□□□□□ -0.48
PCDHGA3-202ENST00000612467 RDH5Q92781 318 aa12.07□□□□□ -0.48
PCDHGA3-202ENST00000612467 POM121L2Q96KW2 1035 aa12.07□□□□□ -0.48
PCDHGA3-202ENST00000612467 PRRX2Q99811 253 aa12.07□□□□□ -0.48
PCDHGA3-202ENST00000612467 GPR87Q9BY21 358 aa12.07□□□□□ -0.48
PCDHGA3-202ENST00000612467 TNRC6AQ8NDV7 1962 aaKnown RBP12.07□□□□□ -0.48
PCDHGA3-202ENST00000612467 CACNA1GO43497 2377 aa12.07□□□□□ -0.48
PCDHGA3-202ENST00000612467 OTOGLQ3ZCN5 2332 aa12.07□□□□□ -0.48
PCDHGA3-202ENST00000612467 MED6O75586 246 aa12.07□□□□□ -0.48
PCDHGA3-202ENST00000612467 PPYP01298 95 aa12.07□□□□□ -0.48
PCDHGA3-202ENST00000612467 SPIN3Q5JUX0 258 aa12.07□□□□□ -0.48
PCDHGA3-202ENST00000612467 MCEMP1Q8IX19 187 aa12.07□□□□□ -0.48
PCDHGA3-202ENST00000612467 ZDHHC23Q8IYP9 409 aa12.07□□□□□ -0.48
PCDHGA3-202ENST00000612467 PUSL1Q8N0Z8 303 aaKnown RBP12.07□□□□□ -0.48
PCDHGA3-202ENST00000612467 RNF141Q8WVD5 230 aa12.07□□□□□ -0.48
PCDHGA3-202ENST00000612467 MSI2Q96DH6 328 aaKnown RBP12.07□□□□□ -0.48
PCDHGA3-202ENST00000612467 WFDC1Q9HC57 220 aa12.07□□□□□ -0.48
PCDHGA3-202ENST00000612467 TMEM100Q9NV29 134 aa12.07□□□□□ -0.48
PCDHGA3-202ENST00000612467 TMEM218A2RU14 115 aa12.06□□□□□ -0.48
PCDHGA3-202ENST00000612467 IFNA21P01568 189 aa12.06□□□□□ -0.48
PCDHGA3-202ENST00000612467 CA6P23280 308 aa12.06□□□□□ -0.48
PCDHGA3-202ENST00000612467 FHITP49789 147 aa12.06□□□□□ -0.48
PCDHGA3-202ENST00000612467 SLC35G3Q8N808 338 aa12.06□□□□□ -0.48
PCDHGA3-202ENST00000612467 DNTTIP1Q9H147 329 aa12.06□□□□□ -0.48
PCDHGA3-202ENST00000612467 TLNRD1Q9H1K6 362 aa12.06□□□□□ -0.48
PCDHGA3-202ENST00000612467 PIGMQ9H3S5 423 aa12.06□□□□□ -0.48
PCDHGA3-202ENST00000612467 TREM1Q9NP99 234 aa12.06□□□□□ -0.48
PCDHGA3-202ENST00000612467 ABI3Q9P2A4 366 aa12.06□□□□□ -0.48
PCDHGA3-202ENST00000612467 DCHS1Q96JQ0 3298 aa12.06□□□□□ -0.48
PCDHGA3-202ENST00000612467 RP1L1Q8IWN7 2480 aaPredicted RBP12.06□□□□□ -0.48
PCDHGA3-202ENST00000612467 A0A1B0GV50 99 aa12.06□□□□□ -0.48
PCDHGA3-202ENST00000612467 CD300LBA8K4G0 201 aa12.06□□□□□ -0.48
PCDHGA3-202ENST00000612467 C21orf140B9A014 251 aa12.06□□□□□ -0.48
PCDHGA3-202ENST00000612467 TOR1AO14656 332 aa12.06□□□□□ -0.48
PCDHGA3-202ENST00000612467 C1QL1O75973 258 aa12.06□□□□□ -0.48
PCDHGA3-202ENST00000612467 NHLH2Q02577 135 aa12.06□□□□□ -0.48
PCDHGA3-202ENST00000612467 MDS2Q8NDY4 140 aa12.06□□□□□ -0.48
PCDHGA3-202ENST00000612467 MOB3AQ96BX8 217 aa12.06□□□□□ -0.48
PCDHGA3-202ENST00000612467 TSNAXQ99598 290 aaKnown RBP12.06□□□□□ -0.48
PCDHGA3-202ENST00000612467 LINC00470Q9BZP3 86 aa12.06□□□□□ -0.48
PCDHGA3-202ENST00000612467 IL36GQ9NZH8 169 aa12.06□□□□□ -0.48
PCDHGA3-202ENST00000612467 KCNIP3Q9Y2W7 256 aa12.06□□□□□ -0.48
PCDHGA3-202ENST00000612467 IGKV1-6A0A0C4DH72 117 aa12.05□□□□□ -0.48
PCDHGA3-202ENST00000612467 HSD17B6O14756 317 aa12.05□□□□□ -0.48
PCDHGA3-202ENST00000612467 GNRHRP30968 328 aa12.05□□□□□ -0.48
PCDHGA3-202ENST00000612467 HERV-K104P61576 105 aa12.05□□□□□ -0.48
PCDHGA3-202ENST00000612467 ALKBH6Q3KRA9 238 aa12.05□□□□□ -0.48
PCDHGA3-202ENST00000612467 MDP1Q86V88 176 aa12.05□□□□□ -0.48
PCDHGA3-202ENST00000612467 LDLRAD3Q86YD5 345 aa12.05□□□□□ -0.48
PCDHGA3-202ENST00000612467 CBLN2Q8IUK8 224 aa12.05□□□□□ -0.48
PCDHGA3-202ENST00000612467 NKX6-2Q9C056 277 aaPredicted RBP12.05□□□□□ -0.48
PCDHGA3-202ENST00000612467 LPAR3Q9UBY5 353 aa12.05□□□□□ -0.48
PCDHGA3-202ENST00000612467 ZNF391Q9UJN7 358 aa12.05□□□□□ -0.48
PCDHGA3-202ENST00000612467 MEMO1Q9Y316 297 aa12.05□□□□□ -0.48
PCDHGA3-202ENST00000612467 A0A1B0GW55 424 aa12.05□□□□□ -0.48
PCDHGA3-202ENST00000612467 C9JQL5 133 aa12.05□□□□□ -0.48
PCDHGA3-202ENST00000612467 NME2P1O60361 137 aa12.05□□□□□ -0.48
PCDHGA3-202ENST00000612467 DUX4L2P0CJ85 424 aa12.05□□□□□ -0.48
PCDHGA3-202ENST00000612467 DUX4L3P0CJ86 424 aa12.05□□□□□ -0.48
PCDHGA3-202ENST00000612467 DUX4L4P0CJ87 422 aa12.05□□□□□ -0.48
PCDHGA3-202ENST00000612467 DUX4L5P0CJ88 424 aa12.05□□□□□ -0.48
PCDHGA3-202ENST00000612467 DUX4L6P0CJ89 424 aa12.05□□□□□ -0.48
PCDHGA3-202ENST00000612467 DUX4L7P0CJ90 424 aa12.05□□□□□ -0.48
PCDHGA3-202ENST00000612467 MUC1P15941 1255 aaPredicted RBP12.05□□□□□ -0.48
PCDHGA3-202ENST00000612467 SLC10A1Q14973 349 aa12.05□□□□□ -0.48
PCDHGA3-202ENST00000612467 TMEM268Q5VZI3 342 aa12.05□□□□□ -0.48
PCDHGA3-202ENST00000612467 LIAT1Q6ZQX7 453 aa12.05□□□□□ -0.48
PCDHGA3-202ENST00000612467 ZNF818PQ6ZRF7 136 aa12.05□□□□□ -0.48
PCDHGA3-202ENST00000612467 APOBEC3DQ96AK3 386 aaPredicted RBP12.05□□□□□ -0.48
PCDHGA3-202ENST00000612467 USB1Q9BQ65 265 aaKnown RBP12.05□□□□□ -0.48
PCDHGA3-202ENST00000612467 MAGT1Q9H0U3 335 aa12.05□□□□□ -0.48
PCDHGA3-202ENST00000612467 DUX4Q9UBX2 424 aa12.05□□□□□ -0.48
PCDHGA3-202ENST00000612467 TUBD1Q9UJT1 453 aa12.05□□□□□ -0.48
PCDHGA3-202ENST00000612467 SPTBN2O15020 2390 aa12.05□□□□□ -0.48
PCDHGA3-202ENST00000612467 NKX2-6A6NCS4 301 aa12.04□□□□□ -0.48
PCDHGA3-202ENST00000612467 RPL36A-HNRNPH2H7BZ11 118 aa12.04□□□□□ -0.48
PCDHGA3-202ENST00000612467 NKX2-8O15522 239 aa12.04□□□□□ -0.48
PCDHGA3-202ENST00000612467 PET100P0DJ07 73 aa12.04□□□□□ -0.48
PCDHGA3-202ENST00000612467 GLP1RP43220 463 aa12.04□□□□□ -0.48
PCDHGA3-202ENST00000612467 ARG2P78540 354 aa12.04□□□□□ -0.48
PCDHGA3-202ENST00000612467 NAAAQ02083 359 aa12.04□□□□□ -0.48
PCDHGA3-202ENST00000612467 CEACAM21Q3KPI0 293 aa12.04□□□□□ -0.48
PCDHGA3-202ENST00000612467 SH3BGRL3Q9H299 93 aa12.04□□□□□ -0.48
PCDHGA3-202ENST00000612467 F8W036 122 aa12.04□□□□□ -0.48
PCDHGA3-202ENST00000612467 ATG12O94817 140 aa12.04□□□□□ -0.48
PCDHGA3-202ENST00000612467 BLOC1S1P78537 153 aa12.04□□□□□ -0.48
PCDHGA3-202ENST00000612467 GAPTQ8N292 157 aa12.04□□□□□ -0.48
PCDHGA3-202ENST00000612467 PRR18Q8N4B5 295 aa12.04□□□□□ -0.48
PCDHGA3-202ENST00000612467 ARL11Q969Q4 196 aa12.04□□□□□ -0.48
PCDHGA3-202ENST00000612467 C18orf12Q96KH6 178 aa12.04□□□□□ -0.48
PCDHGA3-202ENST00000612467 CCL28Q9NRJ3 127 aa12.04□□□□□ -0.48
PCDHGA3-202ENST00000612467 CACNA1DQ01668 2161 aa12.04□□□□□ -0.48
PCDHGA3-202ENST00000612467 FGF12P61328 243 aa12.03□□□□□ -0.48
PCDHGA3-202ENST00000612467 CLN3Q13286 438 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 197.4 ms