RNA–Protein interactions for RNA: ENST00000610470.4

PRKN-208, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene PRKN, Length 531 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-208ENST00000610470 HEPN1Q6WQI6 88 aa13.98□□□□□ -0.17
PRKN-208ENST00000610470 ABHD12Q8N2K0 398 aa13.98□□□□□ -0.17
PRKN-208ENST00000610470 ZNF555Q8NEP9 628 aa13.98□□□□□ -0.17
PRKN-208ENST00000610470 ZNF596Q8TC21 504 aa13.98□□□□□ -0.17
PRKN-208ENST00000610470 PDCD1LG2Q9BQ51 273 aa13.98□□□□□ -0.17
PRKN-208ENST00000610470 NOTCH1P46531 2555 aa13.97□□□□□ -0.17
PRKN-208ENST00000610470 ODAMA1E959 279 aa13.97□□□□□ -0.17
PRKN-208ENST00000610470 SLC33A1O00400 549 aaPredicted RBP13.97□□□□□ -0.17
PRKN-208ENST00000610470 MAGEB3O15480 346 aa13.97□□□□□ -0.17
PRKN-208ENST00000610470 PEX14O75381 377 aa13.97□□□□□ -0.17
PRKN-208ENST00000610470 MMP23AO75900 390 aa13.97□□□□□ -0.17
PRKN-208ENST00000610470 RAB3AP20336 220 aa13.97□□□□□ -0.17
PRKN-208ENST00000610470 CDK2P24941 298 aa13.97□□□□□ -0.17
PRKN-208ENST00000610470 GLIPR1P48060 266 aa13.97□□□□□ -0.17
PRKN-208ENST00000610470 KRBOX4Q5JUW0 171 aa13.97□□□□□ -0.17
PRKN-208ENST00000610470 PRAMEF5Q5TYX0 476 aa13.97□□□□□ -0.17
PRKN-208ENST00000610470 ZNF691Q5VV52 312 aa13.97□□□□□ -0.17
PRKN-208ENST00000610470 LPCAT4Q643R3 524 aa13.97□□□□□ -0.17
PRKN-208ENST00000610470 Q6P435 159 aa13.97□□□□□ -0.17
PRKN-208ENST00000610470 OR4P4Q8NGL7 312 aa13.97□□□□□ -0.17
PRKN-208ENST00000610470 APH1BQ8WW43 257 aa13.97□□□□□ -0.17
PRKN-208ENST00000610470 RDH12Q96NR8 316 aa13.97□□□□□ -0.17
PRKN-208ENST00000610470 JAM3Q9BX67 310 aa13.97□□□□□ -0.17
PRKN-208ENST00000610470 SERTAD4Q9NUC0 356 aa13.97□□□□□ -0.17
PRKN-208ENST00000610470 DPM3Q9P2X0 92 aa13.97□□□□□ -0.17
PRKN-208ENST00000610470 ERICH4A6NGS2 130 aa13.96□□□□□ -0.17
PRKN-208ENST00000610470 FBXO24O75426 580 aa13.96□□□□□ -0.17
PRKN-208ENST00000610470 ALDOBP05062 364 aa13.96□□□□□ -0.17
PRKN-208ENST00000610470 PTGFRP43088 359 aa13.96□□□□□ -0.17
PRKN-208ENST00000610470 ARHGDIBP52566 201 aa13.96□□□□□ -0.17
PRKN-208ENST00000610470 BDH1Q02338 343 aa13.96□□□□□ -0.17
PRKN-208ENST00000610470 HABP2Q14520 560 aaPredicted RBP13.96□□□□□ -0.17
PRKN-208ENST00000610470 ARSJQ5FYB0 599 aaPredicted RBP13.96□□□□□ -0.17
PRKN-208ENST00000610470 PXT1Q8NFP0 134 aa13.96□□□□□ -0.17
PRKN-208ENST00000610470 OR4D6Q8NGJ1 314 aa13.96□□□□□ -0.17
PRKN-208ENST00000610470 CREB3L1Q96BA8 519 aa13.96□□□□□ -0.17
PRKN-208ENST00000610470 GPER1Q99527 375 aa13.96□□□□□ -0.17
PRKN-208ENST00000610470 FGF20Q9NP95 211 aaPredicted RBP13.96□□□□□ -0.17
PRKN-208ENST00000610470 SMPD3Q9NY59 655 aaPredicted RBP13.96□□□□□ -0.17
PRKN-208ENST00000610470 OR6C3Q9NZP0 311 aa13.96□□□□□ -0.17
PRKN-208ENST00000610470 IRGMA1A4Y4 181 aa13.95□□□□□ -0.18
PRKN-208ENST00000610470 FAM90A22PA8MWA6 464 aa13.95□□□□□ -0.18
PRKN-208ENST00000610470 LEUTXA8MZ59 168 aa13.95□□□□□ -0.18
PRKN-208ENST00000610470 CD2P06729 351 aa13.95□□□□□ -0.18
PRKN-208ENST00000610470 LIMS3P0CW19 117 aa13.95□□□□□ -0.18
PRKN-208ENST00000610470 LIMS4P0CW20 117 aa13.95□□□□□ -0.18
PRKN-208ENST00000610470 JUNBP17275 347 aaPredicted RBP13.95□□□□□ -0.18
PRKN-208ENST00000610470 CD34P28906 385 aa13.95□□□□□ -0.18
PRKN-208ENST00000610470 BRS3P32247 399 aa13.95□□□□□ -0.18
PRKN-208ENST00000610470 ATXN7L3Q14CW9 347 aaPredicted RBP13.95□□□□□ -0.18
PRKN-208ENST00000610470 CDK5R1Q15078 307 aa13.95□□□□□ -0.18
PRKN-208ENST00000610470 CCDC58Q4VC31 144 aa13.95□□□□□ -0.18
PRKN-208ENST00000610470 ELP2Q6IA86 826 aa13.95□□□□□ -0.18
PRKN-208ENST00000610470 RPL22L1Q6P5R6 122 aaKnown RBP13.95□□□□□ -0.18
PRKN-208ENST00000610470 TMPRSS11AQ6ZMR5 421 aa13.95□□□□□ -0.18
PRKN-208ENST00000610470 C16orf82Q7Z2V1 217 aa13.95□□□□□ -0.18
PRKN-208ENST00000610470 GPR148Q8TDV2 347 aa13.95□□□□□ -0.18
PRKN-208ENST00000610470 COQ2Q96H96 371 aa13.95□□□□□ -0.18
PRKN-208ENST00000610470 ING3Q9NXR8 418 aa13.95□□□□□ -0.18
PRKN-208ENST00000610470 ZNF729A6NN14 1252 aaPredicted RBP13.94□□□□□ -0.18
PRKN-208ENST00000610470 H0YJX3 145 aa13.94□□□□□ -0.18
PRKN-208ENST00000610470 TOR1AO14656 332 aa13.94□□□□□ -0.18
PRKN-208ENST00000610470 OPN1MWP04001 364 aa13.94□□□□□ -0.18
PRKN-208ENST00000610470 OPN1MW2P0DN77 364 aa13.94□□□□□ -0.18
PRKN-208ENST00000610470 OPN1MW3P0DN78 364 aa13.94□□□□□ -0.18
PRKN-208ENST00000610470 DCKP27707 260 aa13.94□□□□□ -0.18
PRKN-208ENST00000610470 CEACAM3P40198 252 aa13.94□□□□□ -0.18
PRKN-208ENST00000610470 SOX2P48431 317 aa13.94□□□□□ -0.18
PRKN-208ENST00000610470 GTF2A1P52655 376 aaPredicted RBP13.94□□□□□ -0.18
PRKN-208ENST00000610470 PRKDCP78527 4128 aaKnown RBP13.94□□□□□ -0.18
PRKN-208ENST00000610470 IL13RA2Q14627 380 aa13.94□□□□□ -0.18
PRKN-208ENST00000610470 ZNF529Q6P280 563 aa13.94□□□□□ -0.18
PRKN-208ENST00000610470 BAIAP2L2Q6UXY1 529 aa13.94□□□□□ -0.18
PRKN-208ENST00000610470 SATL1Q86VE3 508 aa13.94□□□□□ -0.18
PRKN-208ENST00000610470 TNFAIP8L1Q8WVP5 186 aa13.94□□□□□ -0.18
PRKN-208ENST00000610470 CAPSLQ8WWF8 208 aa13.94□□□□□ -0.18
PRKN-208ENST00000610470 AKR1E2Q96JD6 320 aa13.94□□□□□ -0.18
PRKN-208ENST00000610470 NR1H4Q96RI1 486 aaPredicted RBP13.94□□□□□ -0.18
PRKN-208ENST00000610470 FAM172BPA6NC97 362 aa13.93□□□□□ -0.18
PRKN-208ENST00000610470 GABRPO00591 440 aa13.93□□□□□ -0.18
PRKN-208ENST00000610470 WBP4O75554 376 aaKnown RBP13.93□□□□□ -0.18
PRKN-208ENST00000610470 IGLV1-47P01700 117 aa13.93□□□□□ -0.18
PRKN-208ENST00000610470 GDNFP39905 211 aa13.93□□□□□ -0.18
PRKN-208ENST00000610470 VDAC2P45880 294 aaPredicted RBP13.93□□□□□ -0.18
PRKN-208ENST00000610470 PRRX1P54821 245 aa13.93□□□□□ -0.18
PRKN-208ENST00000610470 BLCAPP62952 87 aa13.93□□□□□ -0.18
PRKN-208ENST00000610470 EMX1Q04741 257 aaPredicted RBP13.93□□□□□ -0.18
PRKN-208ENST00000610470 RCN1Q15293 331 aa13.93□□□□□ -0.18
PRKN-208ENST00000610470 RSU1Q15404 277 aa13.93□□□□□ -0.18
PRKN-208ENST00000610470 SMN1Q16637 294 aaKnown RBP13.93□□□□□ -0.18
PRKN-208ENST00000610470 PAN3Q58A45 887 aaKnown RBP13.93□□□□□ -0.18
PRKN-208ENST00000610470 HIST2H2BDQ6DRA6 164 aa13.93□□□□□ -0.18
PRKN-208ENST00000610470 C1QL4Q86Z23 238 aa13.93□□□□□ -0.18
PRKN-208ENST00000610470 ZNF565Q8N9K5 539 aa13.93□□□□□ -0.18
PRKN-208ENST00000610470 OR51T1Q8NGJ9 327 aa13.93□□□□□ -0.18
PRKN-208ENST00000610470 RGP1Q92546 391 aaPredicted RBP13.93□□□□□ -0.18
PRKN-208ENST00000610470 BARHL1Q9BZE3 327 aa13.93□□□□□ -0.18
PRKN-208ENST00000610470 WNT10AQ9GZT5 417 aa13.93□□□□□ -0.18
PRKN-208ENST00000610470 FAM192AQ9GZU8 254 aa13.93□□□□□ -0.18
PRKN-208ENST00000610470 PPIL3Q9H2H8 161 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms