RNA–Protein interactions for RNA: ENST00000605457.5

TUBE1-211, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,645 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-211ENST00000605457 MS4A7Q9GZW8 240 aaPredicted RBP11.66□□□□□ -0.54
TUBE1-211ENST00000605457 METTL8Q9H825 291 aaKnown RBP11.66□□□□□ -0.54
TUBE1-211ENST00000605457 ST3GAL6Q9Y274 331 aa11.66□□□□□ -0.54
TUBE1-211ENST00000605457 A0A0A6YYJ9 748 aa11.65□□□□□ -0.54
TUBE1-211ENST00000605457 A0A1W2PPH5 198 aa11.65□□□□□ -0.54
TUBE1-211ENST00000605457 RNASEK-C17orf49H0YIS7 233 aa11.65□□□□□ -0.54
TUBE1-211ENST00000605457 CCRL2O00421 344 aa11.65□□□□□ -0.54
TUBE1-211ENST00000605457 DEGS1O15121 323 aa11.65□□□□□ -0.54
TUBE1-211ENST00000605457 CD37P11049 281 aa11.65□□□□□ -0.54
TUBE1-211ENST00000605457 CCL3L1P16619 93 aa11.65□□□□□ -0.54
TUBE1-211ENST00000605457 PRTN3P24158 256 aa11.65□□□□□ -0.54
TUBE1-211ENST00000605457 PSMB9P28065 219 aa11.65□□□□□ -0.54
TUBE1-211ENST00000605457 ERP29P30040 261 aaKnown RBP11.65□□□□□ -0.54
TUBE1-211ENST00000605457 DLX6P56179 175 aa11.65□□□□□ -0.54
TUBE1-211ENST00000605457 SRSF2Q01130 221 aaKnown RBP11.65□□□□□ -0.54
TUBE1-211ENST00000605457 BLMHQ13867 455 aa11.65□□□□□ -0.54
TUBE1-211ENST00000605457 GPR176Q14439 515 aa11.65□□□□□ -0.54
TUBE1-211ENST00000605457 RUSC1-AS1Q66K80 236 aa11.65□□□□□ -0.54
TUBE1-211ENST00000605457 C11orf42Q8N5U0 333 aa11.65□□□□□ -0.54
TUBE1-211ENST00000605457 TPRX1Q8N7U7 411 aa11.65□□□□□ -0.54
TUBE1-211ENST00000605457 SLITRK2Q9H156 845 aa11.65□□□□□ -0.54
TUBE1-211ENST00000605457 IFT22Q9H7X7 185 aa11.65□□□□□ -0.54
TUBE1-211ENST00000605457 PCDHB16Q9NRJ7 776 aa11.65□□□□□ -0.54
TUBE1-211ENST00000605457 SOX21Q9Y651 276 aaPredicted RBP11.65□□□□□ -0.54
TUBE1-211ENST00000605457 TRAV24A0A0B4J272 114 aa11.64□□□□□ -0.55
TUBE1-211ENST00000605457 IGHV1-69DA0A0B4J2H0 117 aa11.64□□□□□ -0.55
TUBE1-211ENST00000605457 MEX3AA1L020 520 aaKnown RBP11.64□□□□□ -0.55
TUBE1-211ENST00000605457 GEMIN2O14893 280 aaKnown RBP11.64□□□□□ -0.55
TUBE1-211ENST00000605457 IGHV1-69P01742 117 aa11.64□□□□□ -0.55
TUBE1-211ENST00000605457 GTF2F2P13984 249 aa11.64□□□□□ -0.55
TUBE1-211ENST00000605457 CALRP27797 417 aaKnown RBP11.64□□□□□ -0.55
TUBE1-211ENST00000605457 P2RX3P56373 397 aa11.64□□□□□ -0.55
TUBE1-211ENST00000605457 HILS1P60008 231 aa11.64□□□□□ -0.55
TUBE1-211ENST00000605457 PRB3Q04118 309 aaPredicted RBP11.64□□□□□ -0.55
TUBE1-211ENST00000605457 MEF2CQ06413 473 aaPredicted RBP11.64□□□□□ -0.55
TUBE1-211ENST00000605457 KLRD1Q13241 179 aa11.64□□□□□ -0.55
TUBE1-211ENST00000605457 C1orf100Q5SVJ3 147 aa11.64□□□□□ -0.55
TUBE1-211ENST00000605457 GLT8D1Q68CQ7 371 aa11.64□□□□□ -0.55
TUBE1-211ENST00000605457 LINC00596Q86U02 117 aa11.64□□□□□ -0.55
TUBE1-211ENST00000605457 PDZD9Q8IXQ8 264 aa11.64□□□□□ -0.55
TUBE1-211ENST00000605457 FOXRED1Q96CU9 486 aaPredicted RBP11.64□□□□□ -0.55
TUBE1-211ENST00000605457 COQ2Q96H96 371 aa11.64□□□□□ -0.55
TUBE1-211ENST00000605457 ZNF48Q96MX3 618 aaPredicted RBP11.64□□□□□ -0.55
TUBE1-211ENST00000605457 GFI1Q99684 422 aa11.64□□□□□ -0.55
TUBE1-211ENST00000605457 ZNF581Q9P0T4 197 aa11.64□□□□□ -0.55
TUBE1-211ENST00000605457 LINC00312Q9Y6C7 94 aa11.64□□□□□ -0.55
TUBE1-211ENST00000605457 hADV38S2A0JD32 116 aa11.64□□□□□ -0.55
TUBE1-211ENST00000605457 HSPB6O14558 160 aa11.64□□□□□ -0.55
TUBE1-211ENST00000605457 OR7C1O76099 320 aaPredicted RBP11.64□□□□□ -0.55
TUBE1-211ENST00000605457 VENTXO95231 258 aa11.64□□□□□ -0.55
TUBE1-211ENST00000605457 TNFAIP8O95379 198 aa11.64□□□□□ -0.55
TUBE1-211ENST00000605457 ZNF728P0DKX0 622 aa11.64□□□□□ -0.55
TUBE1-211ENST00000605457 GUCA2AQ02747 115 aa11.64□□□□□ -0.55
TUBE1-211ENST00000605457 ATXN7L3Q14CW9 347 aaPredicted RBP11.64□□□□□ -0.55
TUBE1-211ENST00000605457 PAN3Q58A45 887 aaKnown RBP11.64□□□□□ -0.55
TUBE1-211ENST00000605457 NCR3LG1Q68D85 454 aa11.64□□□□□ -0.55
TUBE1-211ENST00000605457 SIGLECL1Q8N7X8 197 aa11.64□□□□□ -0.55
TUBE1-211ENST00000605457 MRPS24Q96EL2 167 aaKnown RBP11.64□□□□□ -0.55
TUBE1-211ENST00000605457 GHRLQ9UBU3 117 aa11.64□□□□□ -0.55
TUBE1-211ENST00000605457 TRDV1A0A1B0GX56 115 aa11.63□□□□□ -0.55
TUBE1-211ENST00000605457 C17orf98A8MV24 154 aa11.63□□□□□ -0.55
TUBE1-211ENST00000605457 SLC22A1O15245 554 aa11.63□□□□□ -0.55
TUBE1-211ENST00000605457 RBP4P02753 201 aa11.63□□□□□ -0.55
TUBE1-211ENST00000605457 GALP22466 123 aa11.63□□□□□ -0.55
TUBE1-211ENST00000605457 GLIPR1P48060 266 aa11.63□□□□□ -0.55
TUBE1-211ENST00000605457 AESQ08117 197 aa11.63□□□□□ -0.55
TUBE1-211ENST00000605457 MPV17LQ2QL34 196 aa11.63□□□□□ -0.55
TUBE1-211ENST00000605457 SYT6Q5T7P8 510 aaPredicted RBP11.63□□□□□ -0.55
TUBE1-211ENST00000605457 HCP5Q6MZN7 132 aa11.63□□□□□ -0.55
TUBE1-211ENST00000605457 TMEM104Q8NE00 496 aa11.63□□□□□ -0.55
TUBE1-211ENST00000605457 ZNF714Q96N38 554 aa11.63□□□□□ -0.55
TUBE1-211ENST00000605457 ESM1Q9NQ30 184 aa11.63□□□□□ -0.55
TUBE1-211ENST00000605457 STAB1Q9NY15 2570 aa11.63□□□□□ -0.55
TUBE1-211ENST00000605457 MDFIC2A0A1B0GVS7 189 aa11.62□□□□□ -0.55
TUBE1-211ENST00000605457 hCG_1809904A0A1W2PP81 198 aa11.62□□□□□ -0.55
TUBE1-211ENST00000605457 A0A1W2PPE2 198 aa11.62□□□□□ -0.55
TUBE1-211ENST00000605457 A0A1W2PR64 198 aa11.62□□□□□ -0.55
TUBE1-211ENST00000605457 A0A1W2PRV1 198 aa11.62□□□□□ -0.55
TUBE1-211ENST00000605457 FUOMA2VDF0 154 aa11.62□□□□□ -0.55
TUBE1-211ENST00000605457 UBBP0CG47 229 aa11.62□□□□□ -0.55
TUBE1-211ENST00000605457 MGMTP16455 207 aa11.62□□□□□ -0.55
TUBE1-211ENST00000605457 HTR2CP28335 458 aa11.62□□□□□ -0.55
TUBE1-211ENST00000605457 ERVFRD-1P60508 538 aa11.62□□□□□ -0.55
TUBE1-211ENST00000605457 PAX5Q02548 391 aa11.62□□□□□ -0.55
TUBE1-211ENST00000605457 NEDD8Q15843 81 aa11.62□□□□□ -0.55
TUBE1-211ENST00000605457 TAF9Q16594 264 aa11.62□□□□□ -0.55
TUBE1-211ENST00000605457 KRBOX4Q5JUW0 171 aa11.62□□□□□ -0.55
TUBE1-211ENST00000605457 LCE2DQ5TA82 110 aaPredicted RBP11.62□□□□□ -0.55
TUBE1-211ENST00000605457 SUMF2Q8NBJ7 301 aa11.62□□□□□ -0.55
TUBE1-211ENST00000605457 OR6M1Q8NGM8 313 aa11.62□□□□□ -0.55
TUBE1-211ENST00000605457 Q96M66 194 aa11.62□□□□□ -0.55
TUBE1-211ENST00000605457 BANF2Q9H503 90 aa11.62□□□□□ -0.55
TUBE1-211ENST00000605457 AK6Q9Y3D8 172 aaKnown RBP11.62□□□□□ -0.55
TUBE1-211ENST00000605457 TRAV1-2A0A0B4J238 106 aa11.61□□□□□ -0.55
TUBE1-211ENST00000605457 SHISA3A0PJX4 238 aa11.61□□□□□ -0.55
TUBE1-211ENST00000605457 ODAMA1E959 279 aa11.61□□□□□ -0.55
TUBE1-211ENST00000605457 SLC17A2O00624 439 aa11.61□□□□□ -0.55
TUBE1-211ENST00000605457 CRTAPO75718 401 aaPredicted RBP11.61□□□□□ -0.55
TUBE1-211ENST00000605457 KCNJ3P48549 501 aa11.61□□□□□ -0.55
TUBE1-211ENST00000605457 UBE2E1P51965 193 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms