RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 ZNF486Q96H40 463 aaPredicted RBP12.85□□□□□ -0.35
HIF3A-218ENST00000600383 MRPL37Q9BZE1 423 aaKnown RBP12.85□□□□□ -0.35
HIF3A-218ENST00000600383 TAAR3PQ9P1P4 343 aa12.85□□□□□ -0.35
HIF3A-218ENST00000600383 GPR132Q9UNW8 380 aa12.85□□□□□ -0.35
HIF3A-218ENST00000600383 BOLA1Q9Y3E2 137 aa12.85□□□□□ -0.35
HIF3A-218ENST00000600383 ZSCAN5BA6NJL1 495 aa12.84□□□□□ -0.35
HIF3A-218ENST00000600383 GOSR2O14653 212 aa12.84□□□□□ -0.35
HIF3A-218ENST00000600383 TPD52L2O43399 206 aaKnown RBP12.84□□□□□ -0.35
HIF3A-218ENST00000600383 SLC34A2O95436 690 aa12.84□□□□□ -0.35
HIF3A-218ENST00000600383 OR2H2O95918 312 aa12.84□□□□□ -0.35
HIF3A-218ENST00000600383 C1QBP02746 253 aa12.84□□□□□ -0.35
HIF3A-218ENST00000600383 GLRA1P23415 457 aa12.84□□□□□ -0.35
HIF3A-218ENST00000600383 PMELP40967 661 aa12.84□□□□□ -0.35
HIF3A-218ENST00000600383 RPS23P62266 143 aaKnown RBP12.84□□□□□ -0.35
HIF3A-218ENST00000600383 IL13RA2Q14627 380 aa12.84□□□□□ -0.35
HIF3A-218ENST00000600383 C1QTNF12Q5T7M4 302 aa12.84□□□□□ -0.35
HIF3A-218ENST00000600383 WDR82Q6UXN9 313 aa12.84□□□□□ -0.35
HIF3A-218ENST00000600383 C12orf45Q8N5I9 185 aaPredicted RBP12.84□□□□□ -0.35
HIF3A-218ENST00000600383 CASTOR1Q8WTX7 329 aa12.84□□□□□ -0.35
HIF3A-218ENST00000600383 ELMOD3Q96FG2 381 aa12.84□□□□□ -0.35
HIF3A-218ENST00000600383 C5orf66Q9H5L9 145 aa12.84□□□□□ -0.35
HIF3A-218ENST00000600383 RHOFQ9HBH0 211 aa12.84□□□□□ -0.35
HIF3A-218ENST00000600383 C1orf123Q9NWV4 160 aa12.84□□□□□ -0.35
HIF3A-218ENST00000600383 DIDO1Q9BTC0 2240 aaKnown RBP12.83□□□□□ -0.35
HIF3A-218ENST00000600383 H3BUI4 141 aa12.83□□□□□ -0.35
HIF3A-218ENST00000600383 SLC22A5O76082 557 aa12.83□□□□□ -0.35
HIF3A-218ENST00000600383 PGAM2P15259 253 aa12.83□□□□□ -0.35
HIF3A-218ENST00000600383 CEBPDP49716 269 aaPredicted RBP12.83□□□□□ -0.35
HIF3A-218ENST00000600383 RBM39Q14498 530 aaKnown RBP12.83□□□□□ -0.35
HIF3A-218ENST00000600383 Q6P435 159 aa12.83□□□□□ -0.35
HIF3A-218ENST00000600383 NLRC3Q7RTR2 1065 aa12.83□□□□□ -0.35
HIF3A-218ENST00000600383 LHFPL1Q86WI0 220 aa12.83□□□□□ -0.35
HIF3A-218ENST00000600383 OR2AK2Q8NG84 335 aa12.83□□□□□ -0.35
HIF3A-218ENST00000600383 PKD1L2Q7Z442 2459 aa12.83□□□□□ -0.36
HIF3A-218ENST00000600383 SH2D1BO14796 132 aa12.83□□□□□ -0.36
HIF3A-218ENST00000600383 KNG1P01042 644 aa12.83□□□□□ -0.36
HIF3A-218ENST00000600383 PAN3Q58A45 887 aaKnown RBP12.83□□□□□ -0.36
HIF3A-218ENST00000600383 IGSF11Q5DX21 431 aa12.83□□□□□ -0.36
HIF3A-218ENST00000600383 LIN54Q6MZP7 749 aa12.83□□□□□ -0.36
HIF3A-218ENST00000600383 C20orf204Q6ZNR8 217 aa12.83□□□□□ -0.36
HIF3A-218ENST00000600383 SPICQ8N5J4 248 aa12.83□□□□□ -0.36
HIF3A-218ENST00000600383 POC1AQ8NBT0 407 aa12.83□□□□□ -0.36
HIF3A-218ENST00000600383 OR2T35Q8NGX2 323 aa12.83□□□□□ -0.36
HIF3A-218ENST00000600383 WDR89Q96FK6 387 aaPredicted RBP12.83□□□□□ -0.36
HIF3A-218ENST00000600383 SCGB3A2Q96PL1 93 aa12.83□□□□□ -0.36
HIF3A-218ENST00000600383 LIME1Q9H400 295 aa12.83□□□□□ -0.36
HIF3A-218ENST00000600383 MYOZ1Q9NP98 299 aaPredicted RBP12.83□□□□□ -0.36
HIF3A-218ENST00000600383 DLL4Q9NR61 685 aa12.83□□□□□ -0.36
HIF3A-218ENST00000600383 COQ3Q9NZJ6 369 aa12.83□□□□□ -0.36
HIF3A-218ENST00000600383 C9orf170A2RU37 121 aa12.82□□□□□ -0.36
HIF3A-218ENST00000600383 NKX2-6A6NCS4 301 aa12.82□□□□□ -0.36
HIF3A-218ENST00000600383 NAPSAO96009 420 aa12.82□□□□□ -0.36
HIF3A-218ENST00000600383 FPR2P25090 351 aa12.82□□□□□ -0.36
HIF3A-218ENST00000600383 FCGR2CP31995 323 aa12.82□□□□□ -0.36
HIF3A-218ENST00000600383 GZMKP49863 264 aa12.82□□□□□ -0.36
HIF3A-218ENST00000600383 FXYD4P59646 89 aa12.82□□□□□ -0.36
HIF3A-218ENST00000600383 MZT1Q08AG7 82 aa12.82□□□□□ -0.36
HIF3A-218ENST00000600383 SPRNQ5BIV9 151 aa12.82□□□□□ -0.36
HIF3A-218ENST00000600383 ADAM5Q6NVV9 412 aa12.82□□□□□ -0.36
HIF3A-218ENST00000600383 FIP1L1Q6UN15 594 aaKnown RBP12.82□□□□□ -0.36
HIF3A-218ENST00000600383 LYG2Q86SG7 212 aa12.82□□□□□ -0.36
HIF3A-218ENST00000600383 BOLLQ8N9W6 283 aaKnown RBP12.82□□□□□ -0.36
HIF3A-218ENST00000600383 TOMM40LQ969M1 308 aa12.82□□□□□ -0.36
HIF3A-218ENST00000600383 OR2V2Q96R30 315 aa12.82□□□□□ -0.36
HIF3A-218ENST00000600383 RTBDNQ9BSG5 229 aaPredicted RBP12.82□□□□□ -0.36
HIF3A-218ENST00000600383 Q9N2K0 584 aa12.82□□□□□ -0.36
HIF3A-218ENST00000600383 ATP23Q9Y6H3 246 aa12.82□□□□□ -0.36
HIF3A-218ENST00000600383 CHD3Q12873 2000 aaKnown RBP12.82□□□□□ -0.36
HIF3A-218ENST00000600383 IGLV3-9A0A075B6K5 115 aa12.82□□□□□ -0.36
HIF3A-218ENST00000600383 TFF1P04155 84 aa12.82□□□□□ -0.36
HIF3A-218ENST00000600383 SCTP09683 121 aa12.82□□□□□ -0.36
HIF3A-218ENST00000600383 ZBTB25P24278 435 aa12.82□□□□□ -0.36
HIF3A-218ENST00000600383 CD34P28906 385 aa12.82□□□□□ -0.36
HIF3A-218ENST00000600383 ERP29P30040 261 aaKnown RBP12.82□□□□□ -0.36
HIF3A-218ENST00000600383 SEC61A1P61619 476 aaKnown RBP12.82□□□□□ -0.36
HIF3A-218ENST00000600383 TMEM128Q5BJH2 165 aa12.82□□□□□ -0.36
HIF3A-218ENST00000600383 Q5BKY6 102 aa12.82□□□□□ -0.36
HIF3A-218ENST00000600383 KCTD9Q7L273 389 aa12.82□□□□□ -0.36
HIF3A-218ENST00000600383 OR5T2Q8NGG2 359 aa12.82□□□□□ -0.36
HIF3A-218ENST00000600383 LRRC29Q8WV35 223 aa12.82□□□□□ -0.36
HIF3A-218ENST00000600383 PLSCR3Q9NRY6 295 aa12.82□□□□□ -0.36
HIF3A-218ENST00000600383 SMG1Q96Q15 3661 aaKnown RBP12.81□□□□□ -0.36
HIF3A-218ENST00000600383 SLC33A1O00400 549 aaPredicted RBP12.81□□□□□ -0.36
HIF3A-218ENST00000600383 BET1O15155 118 aa12.81□□□□□ -0.36
HIF3A-218ENST00000600383 HAND1O96004 215 aa12.81□□□□□ -0.36
HIF3A-218ENST00000600383 RCC1P18754 421 aaPredicted RBP12.81□□□□□ -0.36
HIF3A-218ENST00000600383 NFYAP23511 347 aaPredicted RBP12.81□□□□□ -0.36
HIF3A-218ENST00000600383 CHRNB4P30926 498 aa12.81□□□□□ -0.36
HIF3A-218ENST00000600383 ASCL1P50553 236 aa12.81□□□□□ -0.36
HIF3A-218ENST00000600383 H2BFSP57053 126 aa12.81□□□□□ -0.36
HIF3A-218ENST00000600383 ZNF146Q15072 292 aa12.81□□□□□ -0.36
HIF3A-218ENST00000600383 DHRS11Q6UWP2 260 aa12.81□□□□□ -0.36
HIF3A-218ENST00000600383 HYLS1Q96M11 299 aa12.81□□□□□ -0.36
HIF3A-218ENST00000600383 TLNRD1Q9H1K6 362 aa12.81□□□□□ -0.36
HIF3A-218ENST00000600383 RANBP3Q9H6Z4 567 aaPredicted RBP12.81□□□□□ -0.36
HIF3A-218ENST00000600383 TRAV39A0A0B4J263 110 aa12.8□□□□□ -0.36
HIF3A-218ENST00000600383 NOS1APO75052 506 aaPredicted RBP12.8□□□□□ -0.36
HIF3A-218ENST00000600383 ZNF81P51508 661 aa12.8□□□□□ -0.36
HIF3A-218ENST00000600383 TAS2R31P59538 309 aa12.8□□□□□ -0.36
HIF3A-218ENST00000600383 ATXN7L3Q14CW9 347 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms