RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 ZNF552Q9H707 407 aaPredicted RBP9.96□□□□□ -0.82
ARHGEF1-220ENST00000600274 OSGIN2Q9Y236 505 aa9.96□□□□□ -0.82
ARHGEF1-220ENST00000600274 RBM7Q9Y580 266 aaKnown RBP9.96□□□□□ -0.82
ARHGEF1-220ENST00000600274 MUC6Q6W4X9 2439 aa9.96□□□□□ -0.82
ARHGEF1-220ENST00000600274 SP1P08047 785 aa9.95□□□□□ -0.82
ARHGEF1-220ENST00000600274 CD46P15529 392 aa9.95□□□□□ -0.82
ARHGEF1-220ENST00000600274 CA6P23280 308 aa9.95□□□□□ -0.82
ARHGEF1-220ENST00000600274 HIST1H3AP68431 136 aa9.95□□□□□ -0.82
ARHGEF1-220ENST00000600274 TRIP6Q15654 476 aaKnown RBP9.95□□□□□ -0.82
ARHGEF1-220ENST00000600274 HIST2H3PS2Q5TEC6 136 aa9.95□□□□□ -0.82
ARHGEF1-220ENST00000600274 HIST2H3AQ71DI3 136 aa9.95□□□□□ -0.82
ARHGEF1-220ENST00000600274 NECAP2Q9NVZ3 263 aa9.95□□□□□ -0.82
ARHGEF1-220ENST00000600274 FBLN5Q9UBX5 448 aa9.95□□□□□ -0.82
ARHGEF1-220ENST00000600274 KCNIP3Q9Y2W7 256 aa9.95□□□□□ -0.82
ARHGEF1-220ENST00000600274 APC2O95996 2303 aa9.95□□□□□ -0.82
ARHGEF1-220ENST00000600274 SYNGR1O43759 233 aa9.95□□□□□ -0.82
ARHGEF1-220ENST00000600274 WISP2O76076 250 aa9.95□□□□□ -0.82
ARHGEF1-220ENST00000600274 ZNF44P15621 663 aa9.95□□□□□ -0.82
ARHGEF1-220ENST00000600274 OMGP23515 440 aa9.95□□□□□ -0.82
ARHGEF1-220ENST00000600274 APLNRP35414 380 aa9.95□□□□□ -0.82
ARHGEF1-220ENST00000600274 POLR2GP62487 172 aaKnown RBP eCLIP9.95□□□□□ -0.82
ARHGEF1-220ENST00000600274 CLN3Q13286 438 aa9.95□□□□□ -0.82
ARHGEF1-220ENST00000600274 RBMS3Q6XE24 437 aaKnown RBP9.95□□□□□ -0.82
ARHGEF1-220ENST00000600274 LYZL2Q7Z4W2 148 aa9.95□□□□□ -0.82
ARHGEF1-220ENST00000600274 CXorf67Q86X51 503 aaPredicted RBP9.95□□□□□ -0.82
ARHGEF1-220ENST00000600274 EXTL1Q92935 676 aa9.95□□□□□ -0.82
ARHGEF1-220ENST00000600274 ZNF286AQ9HBT8 521 aa9.95□□□□□ -0.82
ARHGEF1-220ENST00000600274 KLRC4-KLRK1H3BQV0 150 aa9.95□□□□□ -0.82
ARHGEF1-220ENST00000600274 LRP3O75074 770 aa9.95□□□□□ -0.82
ARHGEF1-220ENST00000600274 CYCSP99999 105 aaKnown RBP9.95□□□□□ -0.82
ARHGEF1-220ENST00000600274 HOXA4Q00056 320 aaPredicted RBP9.95□□□□□ -0.82
ARHGEF1-220ENST00000600274 AVPI1Q5T686 147 aa9.95□□□□□ -0.82
ARHGEF1-220ENST00000600274 GGNBP1Q5YKI7 109 aa9.95□□□□□ -0.82
ARHGEF1-220ENST00000600274 RPL7L1Q6DKI1 246 aaKnown RBP9.95□□□□□ -0.82
ARHGEF1-220ENST00000600274 BAP18Q8IXM2 172 aa9.95□□□□□ -0.82
ARHGEF1-220ENST00000600274 RNF126Q9BV68 326 aa9.95□□□□□ -0.82
ARHGEF1-220ENST00000600274 DDA1Q9BW61 102 aa9.95□□□□□ -0.82
ARHGEF1-220ENST00000600274 C1orf123Q9NWV4 160 aa9.95□□□□□ -0.82
ARHGEF1-220ENST00000600274 FZR1Q9UM11 496 aa9.95□□□□□ -0.82
ARHGEF1-220ENST00000600274 TRAPPC2LH3BP13 241 aa9.94□□□□□ -0.82
ARHGEF1-220ENST00000600274 HSD17B6O14756 317 aa9.94□□□□□ -0.82
ARHGEF1-220ENST00000600274 DNPH1O43598 174 aa9.94□□□□□ -0.82
ARHGEF1-220ENST00000600274 ACTL6AO96019 429 aa9.94□□□□□ -0.82
ARHGEF1-220ENST00000600274 RNF224P0DH78 156 aa9.94□□□□□ -0.82
ARHGEF1-220ENST00000600274 RAB13P51153 203 aa9.94□□□□□ -0.82
ARHGEF1-220ENST00000600274 RNFT1Q5M7Z0 435 aa9.94□□□□□ -0.82
ARHGEF1-220ENST00000600274 AKR1E2Q96JD6 320 aa9.94□□□□□ -0.82
ARHGEF1-220ENST00000600274 FER1L6-AS2Q96M78 137 aa9.94□□□□□ -0.82
ARHGEF1-220ENST00000600274 PURGQ9UJV8 347 aaKnown RBP9.94□□□□□ -0.82
ARHGEF1-220ENST00000600274 OR6C65A6NJZ3 312 aa9.94□□□□□ -0.82
ARHGEF1-220ENST00000600274 SNAPINO95295 136 aa9.94□□□□□ -0.82
ARHGEF1-220ENST00000600274 IGLV3-1P01715 115 aa9.94□□□□□ -0.82
ARHGEF1-220ENST00000600274 ZNF16P17020 682 aaPredicted RBP9.94□□□□□ -0.82
ARHGEF1-220ENST00000600274 AADACP22760 399 aa9.94□□□□□ -0.82
ARHGEF1-220ENST00000600274 CHATP28329 748 aa9.94□□□□□ -0.82
ARHGEF1-220ENST00000600274 ZNF766Q5HY98 468 aa9.94□□□□□ -0.82
ARHGEF1-220ENST00000600274 FOXL2NBQ6ZUU3 175 aa9.94□□□□□ -0.82
ARHGEF1-220ENST00000600274 SSC4DQ8WTU2 575 aa9.94□□□□□ -0.82
ARHGEF1-220ENST00000600274 C2orf50Q96LR7 162 aa9.94□□□□□ -0.82
ARHGEF1-220ENST00000600274 MAGT1Q9H0U3 335 aa9.94□□□□□ -0.82
ARHGEF1-220ENST00000600274 MEMO1Q9Y316 297 aa9.94□□□□□ -0.82
ARHGEF1-220ENST00000600274 K7EPK0 472 aa9.94□□□□□ -0.82
ARHGEF1-220ENST00000600274 MSTNO14793 375 aa9.94□□□□□ -0.82
ARHGEF1-220ENST00000600274 NME2P1O60361 137 aa9.94□□□□□ -0.82
ARHGEF1-220ENST00000600274 MMP7P09237 267 aaPredicted RBP9.94□□□□□ -0.82
ARHGEF1-220ENST00000600274 RAB5BP61020 215 aa9.94□□□□□ -0.82
ARHGEF1-220ENST00000600274 ZDHHC23Q8IYP9 409 aa9.94□□□□□ -0.82
ARHGEF1-220ENST00000600274 FAM71E2Q8N5Q1 922 aa9.94□□□□□ -0.82
ARHGEF1-220ENST00000600274 RNF141Q8WVD5 230 aa9.94□□□□□ -0.82
ARHGEF1-220ENST00000600274 GPR87Q9BY21 358 aa9.94□□□□□ -0.82
ARHGEF1-220ENST00000600274 TRGV5A0A0B4J1U4 118 aa9.93□□□□□ -0.82
ARHGEF1-220ENST00000600274 SLC22A20A6NK97 555 aa9.93□□□□□ -0.82
ARHGEF1-220ENST00000600274 C1orf196B1AJZ1 125 aa9.93□□□□□ -0.82
ARHGEF1-220ENST00000600274 PDCD6O75340 191 aa9.93□□□□□ -0.82
ARHGEF1-220ENST00000600274 CELA3BP08861 270 aa9.93□□□□□ -0.82
ARHGEF1-220ENST00000600274 EPHA1P21709 976 aa9.93□□□□□ -0.82
ARHGEF1-220ENST00000600274 SOX8P57073 446 aa9.93□□□□□ -0.82
ARHGEF1-220ENST00000600274 ERVS71-1P61550 626 aa9.93□□□□□ -0.82
ARHGEF1-220ENST00000600274 ARL6IP1Q15041 203 aa9.93□□□□□ -0.82
ARHGEF1-220ENST00000600274 RIPPLY2Q5TAB7 128 aa9.93□□□□□ -0.82
ARHGEF1-220ENST00000600274 FAHD2BQ6P2I3 314 aaPredicted RBP9.93□□□□□ -0.82
ARHGEF1-220ENST00000600274 ZNF565Q8N9K5 539 aa9.93□□□□□ -0.82
ARHGEF1-220ENST00000600274 RNASE11Q8TAA1 199 aaKnown RBP9.93□□□□□ -0.82
ARHGEF1-220ENST00000600274 FAHD2AQ96GK7 314 aa9.93□□□□□ -0.82
ARHGEF1-220ENST00000600274 TRIB1Q96RU8 372 aa9.93□□□□□ -0.82
ARHGEF1-220ENST00000600274 MYOZ1Q9NP98 299 aaPredicted RBP9.93□□□□□ -0.82
ARHGEF1-220ENST00000600274 OR14J1Q9UGF5 321 aa9.93□□□□□ -0.82
ARHGEF1-220ENST00000600274 KLF13Q9Y2Y9 288 aaPredicted RBP9.93□□□□□ -0.82
ARHGEF1-220ENST00000600274 UBE2J1Q9Y385 318 aaPredicted RBP9.93□□□□□ -0.82
ARHGEF1-220ENST00000600274 GRPP07492 148 aa9.93□□□□□ -0.82
ARHGEF1-220ENST00000600274 SCTP09683 121 aa9.93□□□□□ -0.82
ARHGEF1-220ENST00000600274 FUT3P21217 361 aa9.93□□□□□ -0.82
ARHGEF1-220ENST00000600274 CALCRP30988 508 aa9.93□□□□□ -0.82
ARHGEF1-220ENST00000600274 NSUN5P2Q63ZY6 315 aa9.93□□□□□ -0.82
ARHGEF1-220ENST00000600274 ZNF600Q6ZNG1 722 aa9.93□□□□□ -0.82
ARHGEF1-220ENST00000600274 MYPOPQ86VE0 399 aaPredicted RBP9.93□□□□□ -0.82
ARHGEF1-220ENST00000600274 MKXQ8IYA7 352 aa9.93□□□□□ -0.82
ARHGEF1-220ENST00000600274 RXFP4Q8TDU9 374 aa9.93□□□□□ -0.82
ARHGEF1-220ENST00000600274 TM2D1Q9BX74 207 aa9.93□□□□□ -0.82
ARHGEF1-220ENST00000600274 RGCCQ9H4X1 137 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 186.6 ms