RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 OR5D13Q8NGL4 314 aa15.96■□□□□ 0.15
SHKBP1-221ENST00000599833 LHX4Q969G2 390 aa15.96■□□□□ 0.15
SHKBP1-221ENST00000599833 SLC25A28Q96A46 364 aa15.96■□□□□ 0.15
SHKBP1-221ENST00000599833 TENM1Q9UKZ4 2725 aa15.96■□□□□ 0.15
SHKBP1-221ENST00000599833 IGHV1-69DA0A0B4J2H0 117 aa15.95■□□□□ 0.14
SHKBP1-221ENST00000599833 MDFIC2A0A1B0GVS7 189 aa15.95■□□□□ 0.14
SHKBP1-221ENST00000599833 MEX3AA1L020 520 aaKnown RBP15.95■□□□□ 0.14
SHKBP1-221ENST00000599833 MEGF11A6BM72 1044 aa15.95■□□□□ 0.14
SHKBP1-221ENST00000599833 TCF21O43680 179 aa15.95■□□□□ 0.14
SHKBP1-221ENST00000599833 IGHV1-69P01742 117 aa15.95■□□□□ 0.14
SHKBP1-221ENST00000599833 SERPINA2P20848 420 aa15.95■□□□□ 0.14
SHKBP1-221ENST00000599833 PAX5Q02548 391 aa15.95■□□□□ 0.14
SHKBP1-221ENST00000599833 KRTAP24-1Q3LI83 254 aa15.95■□□□□ 0.14
SHKBP1-221ENST00000599833 OSR2Q8N2R0 312 aa15.95■□□□□ 0.14
SHKBP1-221ENST00000599833 SIGLECL1Q8N7X8 197 aa15.95■□□□□ 0.14
SHKBP1-221ENST00000599833 ZDHHC22Q8N966 263 aa15.95■□□□□ 0.14
SHKBP1-221ENST00000599833 AJUBAQ96IF1 538 aa15.95■□□□□ 0.14
SHKBP1-221ENST00000599833 NR1H4Q96RI1 486 aaPredicted RBP15.95■□□□□ 0.14
SHKBP1-221ENST00000599833 PPA2Q9H2U2 334 aa15.95■□□□□ 0.14
SHKBP1-221ENST00000599833 ST3GAL6Q9Y274 331 aa15.95■□□□□ 0.14
SHKBP1-221ENST00000599833 TRIM64CA6NLI5 447 aa15.94■□□□□ 0.14
SHKBP1-221ENST00000599833 CCRL2O00421 344 aa15.94■□□□□ 0.14
SHKBP1-221ENST00000599833 GEMIN2O14893 280 aaKnown RBP15.94■□□□□ 0.14
SHKBP1-221ENST00000599833 SLC22A1O15245 554 aa15.94■□□□□ 0.14
SHKBP1-221ENST00000599833 ZNF44P15621 663 aa15.94■□□□□ 0.14
SHKBP1-221ENST00000599833 P2RX3P56373 397 aa15.94■□□□□ 0.14
SHKBP1-221ENST00000599833 EDDM3BP56851 147 aa15.94■□□□□ 0.14
SHKBP1-221ENST00000599833 QRFPP83859 136 aa15.94■□□□□ 0.14
SHKBP1-221ENST00000599833 MEF2CQ06413 473 aaPredicted RBP15.94■□□□□ 0.14
SHKBP1-221ENST00000599833 EDDM3AQ14507 147 aa15.94■□□□□ 0.14
SHKBP1-221ENST00000599833 SLC22A6Q4U2R8 563 aa15.94■□□□□ 0.14
SHKBP1-221ENST00000599833 SYT6Q5T7P8 510 aaPredicted RBP15.94■□□□□ 0.14
SHKBP1-221ENST00000599833 GPR157Q5UAW9 335 aa15.94■□□□□ 0.14
SHKBP1-221ENST00000599833 GDPD3Q7L5L3 318 aa15.94■□□□□ 0.14
SHKBP1-221ENST00000599833 PNKDQ8N490 385 aa15.94■□□□□ 0.14
SHKBP1-221ENST00000599833 FCGR1BQ92637 280 aa15.94■□□□□ 0.14
SHKBP1-221ENST00000599833 METTL8Q9H825 291 aaKnown RBP15.94■□□□□ 0.14
SHKBP1-221ENST00000599833 TCF7L1Q9HCS4 588 aa15.94■□□□□ 0.14
SHKBP1-221ENST00000599833 RCC2Q9P258 522 aaKnown RBP15.94■□□□□ 0.14
SHKBP1-221ENST00000599833 GLS2Q9UI32 602 aa15.94■□□□□ 0.14
SHKBP1-221ENST00000599833 A0A0A6YYJ9 748 aa15.93■□□□□ 0.14
SHKBP1-221ENST00000599833 TRDV1A0A1B0GX56 115 aa15.93■□□□□ 0.14
SHKBP1-221ENST00000599833 DEGS1O15121 323 aa15.93■□□□□ 0.14
SHKBP1-221ENST00000599833 ZNF780AO75290 641 aaPredicted RBP15.93■□□□□ 0.14
SHKBP1-221ENST00000599833 GLIPR1P48060 266 aa15.93■□□□□ 0.14
SHKBP1-221ENST00000599833 BPIFB3P59826 476 aa15.93■□□□□ 0.14
SHKBP1-221ENST00000599833 AESQ08117 197 aa15.93■□□□□ 0.14
SHKBP1-221ENST00000599833 PDZD9Q8IXQ8 264 aa15.93■□□□□ 0.14
SHKBP1-221ENST00000599833 CMTM4Q8IZR5 234 aa15.93■□□□□ 0.14
SHKBP1-221ENST00000599833 PLPPR1Q8TBJ4 325 aa15.93■□□□□ 0.14
SHKBP1-221ENST00000599833 CORO2AQ92828 525 aa15.93■□□□□ 0.14
SHKBP1-221ENST00000599833 OCEL1Q9H607 264 aa15.93■□□□□ 0.14
SHKBP1-221ENST00000599833 LINC00312Q9Y6C7 94 aa15.93■□□□□ 0.14
SHKBP1-221ENST00000599833 CGB3P0DN86 165 aa15.92■□□□□ 0.14
SHKBP1-221ENST00000599833 CGB7P0DN87 165 aa15.92■□□□□ 0.14
SHKBP1-221ENST00000599833 GALP22466 123 aa15.92■□□□□ 0.14
SHKBP1-221ENST00000599833 FPR2P25090 351 aa15.92■□□□□ 0.14
SHKBP1-221ENST00000599833 CALRP27797 417 aaKnown RBP15.92■□□□□ 0.14
SHKBP1-221ENST00000599833 PSMB9P28065 219 aa15.92■□□□□ 0.14
SHKBP1-221ENST00000599833 SCN1BQ07699 218 aa15.92■□□□□ 0.14
SHKBP1-221ENST00000599833 SCGB2A2Q13296 93 aa15.92■□□□□ 0.14
SHKBP1-221ENST00000599833 ATXN7L3Q14CW9 347 aaPredicted RBP15.92■□□□□ 0.14
SHKBP1-221ENST00000599833 DEFB112Q30KQ8 113 aa15.92■□□□□ 0.14
SHKBP1-221ENST00000599833 RSBN1Q5VWQ0 802 aaPredicted RBP15.92■□□□□ 0.14
SHKBP1-221ENST00000599833 AWAT2Q6E213 333 aa15.92■□□□□ 0.14
SHKBP1-221ENST00000599833 SIGIRRQ6IA17 410 aa15.92■□□□□ 0.14
SHKBP1-221ENST00000599833 NR2C2APQ86WQ0 139 aa15.92■□□□□ 0.14
SHKBP1-221ENST00000599833 BPIFB2Q8N4F0 458 aa15.92■□□□□ 0.14
SHKBP1-221ENST00000599833 Q96M66 194 aa15.92■□□□□ 0.14
SHKBP1-221ENST00000599833 SUCNR1Q9BXA5 334 aa15.92■□□□□ 0.14
SHKBP1-221ENST00000599833 MS4A7Q9GZW8 240 aaPredicted RBP15.92■□□□□ 0.14
SHKBP1-221ENST00000599833 KCNK15Q9H427 330 aa15.92■□□□□ 0.14
SHKBP1-221ENST00000599833 ZNF696Q9H7X3 374 aa15.92■□□□□ 0.14
SHKBP1-221ENST00000599833 AK6Q9Y3D8 172 aaKnown RBP15.92■□□□□ 0.14
SHKBP1-221ENST00000599833 STAB1Q9NY15 2570 aa15.91■□□□□ 0.14
SHKBP1-221ENST00000599833 MMP23AO75900 390 aa15.91■□□□□ 0.14
SHKBP1-221ENST00000599833 ARL6IP5O75915 188 aa15.91■□□□□ 0.14
SHKBP1-221ENST00000599833 RBP4P02753 201 aa15.91■□□□□ 0.14
SHKBP1-221ENST00000599833 ZNF728P0DKX0 622 aa15.91■□□□□ 0.14
SHKBP1-221ENST00000599833 VSIG8P0DPA2 414 aa15.91■□□□□ 0.14
SHKBP1-221ENST00000599833 GTF2F2P13984 249 aa15.91■□□□□ 0.14
SHKBP1-221ENST00000599833 UNC119Q13432 240 aa15.91■□□□□ 0.14
SHKBP1-221ENST00000599833 TAF9Q16594 264 aa15.91■□□□□ 0.14
SHKBP1-221ENST00000599833 MPV17LQ2QL34 196 aa15.91■□□□□ 0.14
SHKBP1-221ENST00000599833 LINC00596Q86U02 117 aa15.91■□□□□ 0.14
SHKBP1-221ENST00000599833 SUMF2Q8NBJ7 301 aa15.91■□□□□ 0.14
SHKBP1-221ENST00000599833 FOXRED1Q96CU9 486 aaPredicted RBP15.91■□□□□ 0.14
SHKBP1-221ENST00000599833 MRPS24Q96EL2 167 aaKnown RBP15.91■□□□□ 0.14
SHKBP1-221ENST00000599833 BANF2Q9H503 90 aa15.91■□□□□ 0.14
SHKBP1-221ENST00000599833 TRAV1-2A0A0B4J238 106 aa15.9■□□□□ 0.14
SHKBP1-221ENST00000599833 A0A0U1RQK1 487 aa15.9■□□□□ 0.14
SHKBP1-221ENST00000599833 ODAMA1E959 279 aa15.9■□□□□ 0.14
SHKBP1-221ENST00000599833 TMEM14DPA8MWL7 114 aa15.9■□□□□ 0.14
SHKBP1-221ENST00000599833 HSPB6O14558 160 aa15.9■□□□□ 0.14
SHKBP1-221ENST00000599833 CSTBP04080 98 aaKnown RBP15.9■□□□□ 0.14
SHKBP1-221ENST00000599833 MGMTP16455 207 aa15.9■□□□□ 0.14
SHKBP1-221ENST00000599833 CFPP27918 469 aa15.9■□□□□ 0.14
SHKBP1-221ENST00000599833 UBE2E1P51965 193 aa15.9■□□□□ 0.14
SHKBP1-221ENST00000599833 GPR176Q14439 515 aa15.9■□□□□ 0.14
SHKBP1-221ENST00000599833 GLT8D1Q68CQ7 371 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms