RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 QRFPP83859 136 aa11.88□□□□□ -0.51
VRK3-213ENST00000597215 PDCD1Q15116 288 aa11.88□□□□□ -0.51
VRK3-213ENST00000597215 GRK1Q15835 563 aa11.88□□□□□ -0.51
VRK3-213ENST00000597215 TAF9Q16594 264 aa11.88□□□□□ -0.51
VRK3-213ENST00000597215 FAHD2BQ6P2I3 314 aaPredicted RBP11.88□□□□□ -0.51
VRK3-213ENST00000597215 SFXN4Q6P4A7 337 aa11.88□□□□□ -0.51
VRK3-213ENST00000597215 SLC16A12Q6ZSM3 486 aa11.88□□□□□ -0.51
VRK3-213ENST00000597215 OR51D1Q8NGF3 324 aa11.88□□□□□ -0.51
VRK3-213ENST00000597215 FAHD2AQ96GK7 314 aa11.88□□□□□ -0.51
VRK3-213ENST00000597215 POM121Q96HA1 1249 aa11.88□□□□□ -0.51
VRK3-213ENST00000597215 DMRTB1Q96MA1 342 aa11.88□□□□□ -0.51
VRK3-213ENST00000597215 MRI1Q9BV20 369 aa11.88□□□□□ -0.51
VRK3-213ENST00000597215 CHST6Q9GZX3 395 aa11.88□□□□□ -0.51
VRK3-213ENST00000597215 SHARPINQ9H0F6 387 aa11.88□□□□□ -0.51
VRK3-213ENST00000597215 PPA2Q9H2U2 334 aa11.88□□□□□ -0.51
VRK3-213ENST00000597215 KCNK15Q9H427 330 aa11.88□□□□□ -0.51
VRK3-213ENST00000597215 LIN7BQ9HAP6 207 aa11.88□□□□□ -0.51
VRK3-213ENST00000597215 SPACA1Q9HBV2 294 aa11.88□□□□□ -0.51
VRK3-213ENST00000597215 TMEM160Q9NX00 188 aa11.88□□□□□ -0.51
VRK3-213ENST00000597215 FBLN5Q9UBX5 448 aa11.88□□□□□ -0.51
VRK3-213ENST00000597215 HIVEP2P31629 2446 aa11.88□□□□□ -0.51
VRK3-213ENST00000597215 TRAV24A0A0B4J272 114 aa11.87□□□□□ -0.51
VRK3-213ENST00000597215 H3BUI4 141 aa11.87□□□□□ -0.51
VRK3-213ENST00000597215 CSN2P05814 226 aa11.87□□□□□ -0.51
VRK3-213ENST00000597215 CLEC2LP0C7M8 214 aa11.87□□□□□ -0.51
VRK3-213ENST00000597215 PPIAL4GP0DN37 164 aa11.87□□□□□ -0.51
VRK3-213ENST00000597215 TGFBR1P36897 503 aa11.87□□□□□ -0.51
VRK3-213ENST00000597215 EDDM3BP56851 147 aa11.87□□□□□ -0.51
VRK3-213ENST00000597215 RPL31P62899 125 aaKnown RBP11.87□□□□□ -0.51
VRK3-213ENST00000597215 RPS27AP62979 156 aaKnown RBP11.87□□□□□ -0.51
VRK3-213ENST00000597215 UNC119Q13432 240 aa11.87□□□□□ -0.51
VRK3-213ENST00000597215 EDDM3AQ14507 147 aa11.87□□□□□ -0.51
VRK3-213ENST00000597215 CR1LQ2VPA4 569 aa11.87□□□□□ -0.51
VRK3-213ENST00000597215 PAN3Q58A45 887 aaKnown RBP11.87□□□□□ -0.51
VRK3-213ENST00000597215 OR10K2Q6IF99 312 aa11.87□□□□□ -0.51
VRK3-213ENST00000597215 Q71RC1 249 aaPredicted RBP11.87□□□□□ -0.51
VRK3-213ENST00000597215 LY6G5BQ8NDX9 201 aa11.87□□□□□ -0.51
VRK3-213ENST00000597215 OR4S1Q8NGB4 309 aa11.87□□□□□ -0.51
VRK3-213ENST00000597215 URM1Q9BTM9 101 aaKnown RBP11.87□□□□□ -0.51
VRK3-213ENST00000597215 A0A1W2PQ09 198 aa11.86□□□□□ -0.51
VRK3-213ENST00000597215 FUOMA2VDF0 154 aa11.86□□□□□ -0.51
VRK3-213ENST00000597215 HSPB6O14558 160 aa11.86□□□□□ -0.51
VRK3-213ENST00000597215 IL1AP01583 271 aa11.86□□□□□ -0.51
VRK3-213ENST00000597215 SLC2A2P11168 524 aaPredicted RBP11.86□□□□□ -0.51
VRK3-213ENST00000597215 HNF1AP20823 631 aa11.86□□□□□ -0.51
VRK3-213ENST00000597215 KCNJ3P48549 501 aa11.86□□□□□ -0.51
VRK3-213ENST00000597215 SERPINB10P48595 397 aa11.86□□□□□ -0.51
VRK3-213ENST00000597215 VBP1P61758 197 aa11.86□□□□□ -0.51
VRK3-213ENST00000597215 NCS1P62166 190 aa11.86□□□□□ -0.51
VRK3-213ENST00000597215 PAX8Q06710 450 aa11.86□□□□□ -0.51
VRK3-213ENST00000597215 CTF1Q16619 201 aa11.86□□□□□ -0.51
VRK3-213ENST00000597215 C2orf76Q3KRA6 126 aa11.86□□□□□ -0.51
VRK3-213ENST00000597215 ATAD3CQ5T2N8 411 aa11.86□□□□□ -0.51
VRK3-213ENST00000597215 CLVS1Q8IUQ0 354 aaPredicted RBP11.86□□□□□ -0.51
VRK3-213ENST00000597215 CROCCP3Q8IVE0 287 aa11.86□□□□□ -0.51
VRK3-213ENST00000597215 FAM185AQ8N0U4 392 aa11.86□□□□□ -0.51
VRK3-213ENST00000597215 SUMF2Q8NBJ7 301 aa11.86□□□□□ -0.51
VRK3-213ENST00000597215 OR4M1Q8NGD0 313 aa11.86□□□□□ -0.51
VRK3-213ENST00000597215 DPCDQ9BVM2 203 aaPredicted RBP11.86□□□□□ -0.51
VRK3-213ENST00000597215 TM2D1Q9BX74 207 aa11.86□□□□□ -0.51
VRK3-213ENST00000597215 TMPRSS13Q9BYE2 586 aa11.86□□□□□ -0.51
VRK3-213ENST00000597215 NAA50Q9GZZ1 169 aaKnown RBP11.86□□□□□ -0.51
VRK3-213ENST00000597215 C7orf69Q9H7B7 122 aa11.86□□□□□ -0.51
VRK3-213ENST00000597215 ZNF581Q9P0T4 197 aa11.86□□□□□ -0.51
VRK3-213ENST00000597215 LPAR3Q9UBY5 353 aa11.86□□□□□ -0.51
VRK3-213ENST00000597215 DAPK2Q9UIK4 370 aa11.86□□□□□ -0.51
VRK3-213ENST00000597215 TMEM272A0A1B0GTI8 110 aa11.85□□□□□ -0.51
VRK3-213ENST00000597215 A0A1W2PPH5 198 aa11.85□□□□□ -0.51
VRK3-213ENST00000597215 LDLRAD4O15165 306 aa11.85□□□□□ -0.51
VRK3-213ENST00000597215 NOL3O60936 208 aaKnown RBP11.85□□□□□ -0.51
VRK3-213ENST00000597215 TMEM127O75204 238 aa11.85□□□□□ -0.51
VRK3-213ENST00000597215 ERP29P30040 261 aaKnown RBP11.85□□□□□ -0.51
VRK3-213ENST00000597215 MEF2CQ06413 473 aaPredicted RBP11.85□□□□□ -0.51
VRK3-213ENST00000597215 ATXN7L3Q14CW9 347 aaPredicted RBP11.85□□□□□ -0.51
VRK3-213ENST00000597215 FAM189A2Q15884 450 aa11.85□□□□□ -0.51
VRK3-213ENST00000597215 CMTM4Q8IZR5 234 aa11.85□□□□□ -0.51
VRK3-213ENST00000597215 TEX29Q8N6K0 151 aa11.85□□□□□ -0.51
VRK3-213ENST00000597215 KIR3DL3Q8N743 410 aa11.85□□□□□ -0.51
VRK3-213ENST00000597215 BCL7BQ9BQE9 202 aa11.85□□□□□ -0.51
VRK3-213ENST00000597215 C19orf12Q9NSK7 152 aa11.85□□□□□ -0.51
VRK3-213ENST00000597215 RCC2Q9P258 522 aaKnown RBP11.85□□□□□ -0.51
VRK3-213ENST00000597215 ONECUT1Q9UBC0 465 aa11.85□□□□□ -0.51
VRK3-213ENST00000597215 RAB22AQ9UL26 194 aa11.85□□□□□ -0.51
VRK3-213ENST00000597215 AUP1Q9Y679 476 aa11.85□□□□□ -0.51
VRK3-213ENST00000597215 DSCAML1Q8TD84 2053 aa11.85□□□□□ -0.51
VRK3-213ENST00000597215 A0A0B4J203 849 aa11.84□□□□□ -0.51
VRK3-213ENST00000597215 hADV38S2A0JD32 116 aa11.84□□□□□ -0.51
VRK3-213ENST00000597215 PDCD6O75340 191 aa11.84□□□□□ -0.51
VRK3-213ENST00000597215 RAB6AP20340 208 aa11.84□□□□□ -0.51
VRK3-213ENST00000597215 FUT3P21217 361 aa11.84□□□□□ -0.51
VRK3-213ENST00000597215 RPS19P39019 145 aaKnown RBP11.84□□□□□ -0.51
VRK3-213ENST00000597215 P2RX3P56373 397 aa11.84□□□□□ -0.51
VRK3-213ENST00000597215 SCAND1P57086 179 aa11.84□□□□□ -0.51
VRK3-213ENST00000597215 RBM39Q14498 530 aaKnown RBP11.84□□□□□ -0.51
VRK3-213ENST00000597215 KRBOX4Q5JUW0 171 aa11.84□□□□□ -0.51
VRK3-213ENST00000597215 FAM120AOSQ5T036 256 aa11.84□□□□□ -0.51
VRK3-213ENST00000597215 IDNKQ5T6J7 187 aa11.84□□□□□ -0.51
VRK3-213ENST00000597215 METTL11BQ5VVY1 283 aa11.84□□□□□ -0.51
VRK3-213ENST00000597215 RAB12Q6IQ22 244 aa11.84□□□□□ -0.51
VRK3-213ENST00000597215 USP43Q70EL4 1123 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms