RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 SOX2P48431 317 aa8.51□□□□□ -1.05
CCDC9-203ENST00000596938 DYNLT3P51808 116 aa8.51□□□□□ -1.05
CCDC9-203ENST00000596938 SCN1BQ07699 218 aa8.51□□□□□ -1.05
CCDC9-203ENST00000596938 AESQ08117 197 aa8.51□□□□□ -1.05
CCDC9-203ENST00000596938 ST3GAL4Q11206 333 aa8.51□□□□□ -1.05
CCDC9-203ENST00000596938 DYNC1I2Q13409 638 aaKnown RBP8.51□□□□□ -1.05
CCDC9-203ENST00000596938 LDLRAD2Q5SZI1 272 aa8.51□□□□□ -1.05
CCDC9-203ENST00000596938 DMKNQ6E0U4 476 aaPredicted RBP8.51□□□□□ -1.05
CCDC9-203ENST00000596938 OR52W1Q6IF63 320 aa8.51□□□□□ -1.05
CCDC9-203ENST00000596938 C11orf88Q6PI97 169 aa8.51□□□□□ -1.05
CCDC9-203ENST00000596938 BRICD5Q6PL45 260 aa8.51□□□□□ -1.05
CCDC9-203ENST00000596938 HEPN1Q6WQI6 88 aa8.51□□□□□ -1.05
CCDC9-203ENST00000596938 DYNAPQ8N1N2 210 aa8.51□□□□□ -1.05
CCDC9-203ENST00000596938 OR51T1Q8NGJ9 327 aa8.51□□□□□ -1.05
CCDC9-203ENST00000596938 FBLIM1Q8WUP2 373 aa8.51□□□□□ -1.05
CCDC9-203ENST00000596938 GHSRQ92847 366 aa8.51□□□□□ -1.05
CCDC9-203ENST00000596938 TMEM106AQ96A25 262 aa8.51□□□□□ -1.05
CCDC9-203ENST00000596938 GAL3ST2Q9H3Q3 398 aa8.51□□□□□ -1.05
CCDC9-203ENST00000596938 NCOR1P1Q9H4R4 102 aa8.51□□□□□ -1.05
CCDC9-203ENST00000596938 RANBP3Q9H6Z4 567 aaPredicted RBP8.51□□□□□ -1.05
CCDC9-203ENST00000596938 TMEM138Q9NPI0 162 aa8.51□□□□□ -1.05
CCDC9-203ENST00000596938 PLCXD1Q9NUJ7 323 aa8.51□□□□□ -1.05
CCDC9-203ENST00000596938 CNOT2Q9NZN8 540 aaKnown RBP8.51□□□□□ -1.05
CCDC9-203ENST00000596938 IGHV2-26A0A0B4J1V2 119 aa8.5□□□□□ -1.05
CCDC9-203ENST00000596938 TRBV5-5A0A0J9YX44 114 aa8.5□□□□□ -1.05
CCDC9-203ENST00000596938 GABRPO00591 440 aa8.5□□□□□ -1.05
CCDC9-203ENST00000596938 TIMM23O14925 209 aa8.5□□□□□ -1.05
CCDC9-203ENST00000596938 GPX5O75715 221 aa8.5□□□□□ -1.05
CCDC9-203ENST00000596938 LALBAP00709 142 aa8.5□□□□□ -1.05
CCDC9-203ENST00000596938 GABRA5P31644 462 aa8.5□□□□□ -1.05
CCDC9-203ENST00000596938 PTGFRP43088 359 aa8.5□□□□□ -1.05
CCDC9-203ENST00000596938 SSX2Q16385 188 aa8.5□□□□□ -1.05
CCDC9-203ENST00000596938 LY6EQ16553 131 aa8.5□□□□□ -1.05
CCDC9-203ENST00000596938 YIF1BQ5BJH7 314 aa8.5□□□□□ -1.05
CCDC9-203ENST00000596938 KRBOX4Q5JUW0 171 aa8.5□□□□□ -1.05
CCDC9-203ENST00000596938 LAIR2Q6ISS4 152 aa8.5□□□□□ -1.05
CCDC9-203ENST00000596938 TRAPPC6BQ86SZ2 158 aa8.5□□□□□ -1.05
CCDC9-203ENST00000596938 RTN4RL2Q86UN3 420 aa8.5□□□□□ -1.05
CCDC9-203ENST00000596938 SATL1Q86VE3 508 aa8.5□□□□□ -1.05
CCDC9-203ENST00000596938 C8orf59Q8N0T1 100 aaPredicted RBP8.5□□□□□ -1.05
CCDC9-203ENST00000596938 ABHD12Q8N2K0 398 aa8.5□□□□□ -1.05
CCDC9-203ENST00000596938 OR51A2Q8NGJ7 313 aa8.5□□□□□ -1.05
CCDC9-203ENST00000596938 TNFAIP8L1Q8WVP5 186 aa8.5□□□□□ -1.05
CCDC9-203ENST00000596938 GPER1Q99527 375 aa8.5□□□□□ -1.05
CCDC9-203ENST00000596938 CLEC7AQ9BXN2 247 aa8.5□□□□□ -1.05
CCDC9-203ENST00000596938 DCLRE1BQ9H816 532 aa8.5□□□□□ -1.05
CCDC9-203ENST00000596938 TCF7L1Q9HCS4 588 aa8.5□□□□□ -1.05
CCDC9-203ENST00000596938 TAS2R4Q9NYW5 299 aa8.5□□□□□ -1.05
CCDC9-203ENST00000596938 PSORS1C1Q9UIG5 152 aa8.5□□□□□ -1.05
CCDC9-203ENST00000596938 TRAV24A0A0B4J272 114 aa8.49□□□□□ -1.05
CCDC9-203ENST00000596938 ODAMA1E959 279 aa8.49□□□□□ -1.05
CCDC9-203ENST00000596938 MEGF11A6BM72 1044 aa8.49□□□□□ -1.05
CCDC9-203ENST00000596938 A6NDX4 124 aa8.49□□□□□ -1.05
CCDC9-203ENST00000596938 H0YJX3 145 aa8.49□□□□□ -1.05
CCDC9-203ENST00000596938 MMP23AO75900 390 aa8.49□□□□□ -1.05
CCDC9-203ENST00000596938 CD1AP06126 327 aa8.49□□□□□ -1.05
CCDC9-203ENST00000596938 GNAO1P09471 354 aa8.49□□□□□ -1.05
CCDC9-203ENST00000596938 CGB3P0DN86 165 aa8.49□□□□□ -1.05
CCDC9-203ENST00000596938 CGB7P0DN87 165 aa8.49□□□□□ -1.05
CCDC9-203ENST00000596938 IGFBP3P17936 291 aaPredicted RBP8.49□□□□□ -1.05
CCDC9-203ENST00000596938 CDK2P24941 298 aa8.49□□□□□ -1.05
CCDC9-203ENST00000596938 HTR1DP28221 377 aa8.49□□□□□ -1.05
CCDC9-203ENST00000596938 CD34P28906 385 aa8.49□□□□□ -1.05
CCDC9-203ENST00000596938 ZNF93P35789 620 aaPredicted RBP8.49□□□□□ -1.05
CCDC9-203ENST00000596938 RAB13P51153 203 aa8.49□□□□□ -1.05
CCDC9-203ENST00000596938 EFNB2P52799 333 aa8.49□□□□□ -1.05
CCDC9-203ENST00000596938 TAS2R43P59537 309 aa8.49□□□□□ -1.05
CCDC9-203ENST00000596938 RPS11P62280 158 aaKnown RBP eCLIP8.49□□□□□ -1.05
CCDC9-203ENST00000596938 PPP3R1P63098 170 aa8.49□□□□□ -1.05
CCDC9-203ENST00000596938 BDH1Q02338 343 aa8.49□□□□□ -1.05
CCDC9-203ENST00000596938 PAX5Q02548 391 aa8.49□□□□□ -1.05
CCDC9-203ENST00000596938 IL13RA2Q14627 380 aa8.49□□□□□ -1.05
CCDC9-203ENST00000596938 RSU1Q15404 277 aa8.49□□□□□ -1.05
CCDC9-203ENST00000596938 FAM189A2Q15884 450 aa8.49□□□□□ -1.05
CCDC9-203ENST00000596938 NHLRC3Q5JS37 347 aa8.49□□□□□ -1.05
CCDC9-203ENST00000596938 ZNF565Q8N9K5 539 aa8.49□□□□□ -1.05
CCDC9-203ENST00000596938 OR4C13Q8NGP0 309 aa8.49□□□□□ -1.05
CCDC9-203ENST00000596938 TFAP2CQ92754 450 aa8.49□□□□□ -1.05
CCDC9-203ENST00000596938 COQ2Q96H96 371 aa8.49□□□□□ -1.05
CCDC9-203ENST00000596938 NR1H4Q96RI1 486 aaPredicted RBP8.49□□□□□ -1.05
CCDC9-203ENST00000596938 BARHL1Q9BZE3 327 aa8.49□□□□□ -1.05
CCDC9-203ENST00000596938 NPFFR1Q9GZQ6 430 aa8.49□□□□□ -1.05
CCDC9-203ENST00000596938 VCXQ9H320 206 aa8.49□□□□□ -1.05
CCDC9-203ENST00000596938 IFT22Q9H7X7 185 aa8.49□□□□□ -1.05
CCDC9-203ENST00000596938 LINC00574Q9H8X3 128 aa8.49□□□□□ -1.05
CCDC9-203ENST00000596938 PCDHB16Q9NRJ7 776 aa8.49□□□□□ -1.05
CCDC9-203ENST00000596938 ABCB10Q9NRK6 738 aa8.49□□□□□ -1.05
CCDC9-203ENST00000596938 PAK1IP1Q9NWT1 392 aaPredicted RBP8.49□□□□□ -1.05
CCDC9-203ENST00000596938 IL36GQ9NZH8 169 aa8.49□□□□□ -1.05
CCDC9-203ENST00000596938 OR6C3Q9NZP0 311 aa8.49□□□□□ -1.05
CCDC9-203ENST00000596938 DPM3Q9P2X0 92 aa8.49□□□□□ -1.05
CCDC9-203ENST00000596938 PITPNC1Q9UKF7 332 aa8.49□□□□□ -1.05
CCDC9-203ENST00000596938 TCF19Q9Y242 345 aa8.49□□□□□ -1.05
CCDC9-203ENST00000596938 VWFP04275 2813 aa8.49□□□□□ -1.05
CCDC9-203ENST00000596938 A0A087X0M5 115 aa8.48□□□□□ -1.05
CCDC9-203ENST00000596938 KBTBD11-OT1A0A1B0GTJ5 212 aa8.48□□□□□ -1.05
CCDC9-203ENST00000596938 A0A1B0GX30 115 aa8.48□□□□□ -1.05
CCDC9-203ENST00000596938 ZNF729A6NN14 1252 aaPredicted RBP8.48□□□□□ -1.05
CCDC9-203ENST00000596938 FAM90A22PA8MWA6 464 aa8.48□□□□□ -1.05
CCDC9-203ENST00000596938 H3BUI4 141 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms