RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 LAIR2Q6ISS4 152 aa10.51□□□□□ -0.73
LIG1-212ENST00000596549 KLHDC1Q8N7A1 406 aa10.51□□□□□ -0.73
LIG1-212ENST00000596549 PXT1Q8NFP0 134 aa10.51□□□□□ -0.73
LIG1-212ENST00000596549 OR5D14Q8NGL3 314 aa10.51□□□□□ -0.73
LIG1-212ENST00000596549 HAVCR2Q8TDQ0 301 aa10.51□□□□□ -0.73
LIG1-212ENST00000596549 ORAI1Q96D31 301 aa10.51□□□□□ -0.73
LIG1-212ENST00000596549 SMIM19Q96E16 107 aa10.51□□□□□ -0.73
LIG1-212ENST00000596549 CLEC7AQ9BXN2 247 aa10.51□□□□□ -0.73
LIG1-212ENST00000596549 NPFFR1Q9GZQ6 430 aa10.51□□□□□ -0.73
LIG1-212ENST00000596549 RAB18Q9NP72 206 aa10.51□□□□□ -0.73
LIG1-212ENST00000596549 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.51□□□□□ -0.73
LIG1-212ENST00000596549 ZNF581Q9P0T4 197 aa10.51□□□□□ -0.73
LIG1-212ENST00000596549 CLEC2DQ9UHP7 191 aa10.51□□□□□ -0.73
LIG1-212ENST00000596549 GLS2Q9UI32 602 aa10.51□□□□□ -0.73
LIG1-212ENST00000596549 DIMT1Q9UNQ2 313 aaKnown RBP10.51□□□□□ -0.73
LIG1-212ENST00000596549 HILPDAQ9Y5L2 63 aa10.51□□□□□ -0.73
LIG1-212ENST00000596549 TRGV10A0A0A0MS01 117 aa10.5□□□□□ -0.73
LIG1-212ENST00000596549 ODAMA1E959 279 aa10.5□□□□□ -0.73
LIG1-212ENST00000596549 H0YJX3 145 aa10.5□□□□□ -0.73
LIG1-212ENST00000596549 HSPB6O14558 160 aa10.5□□□□□ -0.73
LIG1-212ENST00000596549 RAB3AP20336 220 aa10.5□□□□□ -0.73
LIG1-212ENST00000596549 CDK2P24941 298 aa10.5□□□□□ -0.73
LIG1-212ENST00000596549 DCKP27707 260 aa10.5□□□□□ -0.73
LIG1-212ENST00000596549 OR3A4PP47883 348 aa10.5□□□□□ -0.73
LIG1-212ENST00000596549 MTNR1BP49286 362 aa10.5□□□□□ -0.73
LIG1-212ENST00000596549 DYNLT3P51808 116 aa10.5□□□□□ -0.73
LIG1-212ENST00000596549 SCN1BQ07699 218 aa10.5□□□□□ -0.73
LIG1-212ENST00000596549 HERPUD1Q15011 391 aa10.5□□□□□ -0.73
LIG1-212ENST00000596549 C17orf58Q2M2W7 97 aa10.5□□□□□ -0.73
LIG1-212ENST00000596549 PIGYQ3MUY2 71 aa10.5□□□□□ -0.73
LIG1-212ENST00000596549 CCDC58Q4VC31 144 aa10.5□□□□□ -0.73
LIG1-212ENST00000596549 MINOS1Q5TGZ0 78 aa10.5□□□□□ -0.73
LIG1-212ENST00000596549 ELP2Q6IA86 826 aa10.5□□□□□ -0.73
LIG1-212ENST00000596549 RPL22L1Q6P5R6 122 aaKnown RBP10.5□□□□□ -0.73
LIG1-212ENST00000596549 HEPN1Q6WQI6 88 aa10.5□□□□□ -0.73
LIG1-212ENST00000596549 Q8N2B8 174 aa10.5□□□□□ -0.73
LIG1-212ENST00000596549 PACRGLQ8N7B6 248 aa10.5□□□□□ -0.73
LIG1-212ENST00000596549 CHST4Q8NCG5 386 aa10.5□□□□□ -0.73
LIG1-212ENST00000596549 ZNF485Q8NCK3 441 aa10.5□□□□□ -0.73
LIG1-212ENST00000596549 OR10K1Q8NGX5 313 aa10.5□□□□□ -0.73
LIG1-212ENST00000596549 OR2T6Q8NHC8 308 aa10.5□□□□□ -0.73
LIG1-212ENST00000596549 GPR148Q8TDV2 347 aa10.5□□□□□ -0.73
LIG1-212ENST00000596549 TNFAIP8L1Q8WVP5 186 aa10.5□□□□□ -0.73
LIG1-212ENST00000596549 CYGBQ8WWM9 190 aa10.5□□□□□ -0.73
LIG1-212ENST00000596549 CFHR4Q92496 578 aa10.5□□□□□ -0.73
LIG1-212ENST00000596549 CORO2AQ92828 525 aa10.5□□□□□ -0.73
LIG1-212ENST00000596549 TMEM106AQ96A25 262 aa10.5□□□□□ -0.73
LIG1-212ENST00000596549 PGLYRP3Q96LB9 341 aa10.5□□□□□ -0.73
LIG1-212ENST00000596549 GAL3ST2Q9H3Q3 398 aa10.5□□□□□ -0.73
LIG1-212ENST00000596549 ZNF286AQ9HBT8 521 aa10.5□□□□□ -0.73
LIG1-212ENST00000596549 SERTAD4Q9NUC0 356 aa10.5□□□□□ -0.73
LIG1-212ENST00000596549 ING3Q9NXR8 418 aa10.5□□□□□ -0.73
LIG1-212ENST00000596549 TAS2R3Q9NYW6 316 aa10.5□□□□□ -0.73
LIG1-212ENST00000596549 PCDHGB5Q9Y5G0 923 aa10.5□□□□□ -0.73
LIG1-212ENST00000596549 MINOS1-NBL1R4GNA1 71 aa10.5□□□□□ -0.73
LIG1-212ENST00000596549 WNK1Q9H4A3 2382 aa10.5□□□□□ -0.73
LIG1-212ENST00000596549 TRAV24A0A0B4J272 114 aa10.49□□□□□ -0.73
LIG1-212ENST00000596549 MAGEA13PA6NCF6 341 aa10.49□□□□□ -0.73
LIG1-212ENST00000596549 OGG1O15527 345 aa10.49□□□□□ -0.73
LIG1-212ENST00000596549 IGLV1-47P01700 117 aa10.49□□□□□ -0.73
LIG1-212ENST00000596549 RPSAP08865 295 aaKnown RBP10.49□□□□□ -0.73
LIG1-212ENST00000596549 GNAO1P09471 354 aa10.49□□□□□ -0.73
LIG1-212ENST00000596549 CD34P28906 385 aa10.49□□□□□ -0.73
LIG1-212ENST00000596549 PTGFRP43088 359 aa10.49□□□□□ -0.73
LIG1-212ENST00000596549 DEFA6Q01524 100 aa10.49□□□□□ -0.73
LIG1-212ENST00000596549 KRBOX4Q5JUW0 171 aa10.49□□□□□ -0.73
LIG1-212ENST00000596549 Q6ZS46 218 aa10.49□□□□□ -0.73
LIG1-212ENST00000596549 C11orf44Q8N8P7 122 aa10.49□□□□□ -0.73
LIG1-212ENST00000596549 ZFP41Q8N8Y5 198 aa10.49□□□□□ -0.73
LIG1-212ENST00000596549 Q8NFD4 153 aa10.49□□□□□ -0.73
LIG1-212ENST00000596549 OR51T1Q8NGJ9 327 aa10.49□□□□□ -0.73
LIG1-212ENST00000596549 NDNFQ8TB73 568 aa10.49□□□□□ -0.73
LIG1-212ENST00000596549 FAM192AQ9GZU8 254 aa10.49□□□□□ -0.73
LIG1-212ENST00000596549 ABCB10Q9NRK6 738 aa10.49□□□□□ -0.73
LIG1-212ENST00000596549 EXOSC1Q9Y3B2 195 aaKnown RBP10.49□□□□□ -0.73
LIG1-212ENST00000596549 A0A087X0M5 115 aa10.48□□□□□ -0.73
LIG1-212ENST00000596549 TRBV5-5A0A0J9YX44 114 aa10.48□□□□□ -0.73
LIG1-212ENST00000596549 A0A1B0GX30 115 aa10.48□□□□□ -0.73
LIG1-212ENST00000596549 IRGMA1A4Y4 181 aa10.48□□□□□ -0.73
LIG1-212ENST00000596549 CGB3P0DN86 165 aa10.48□□□□□ -0.73
LIG1-212ENST00000596549 CGB7P0DN87 165 aa10.48□□□□□ -0.73
LIG1-212ENST00000596549 IGFBP3P17936 291 aaPredicted RBP10.48□□□□□ -0.73
LIG1-212ENST00000596549 RPS11P62280 158 aaKnown RBP eCLIP10.48□□□□□ -0.73
LIG1-212ENST00000596549 SLC34A1Q06495 639 aa10.48□□□□□ -0.73
LIG1-212ENST00000596549 IL13RA2Q14627 380 aa10.48□□□□□ -0.73
LIG1-212ENST00000596549 C2orf68Q2NKX9 166 aa10.48□□□□□ -0.73
LIG1-212ENST00000596549 TMEM95Q3KNT9 176 aa10.48□□□□□ -0.73
LIG1-212ENST00000596549 OGFRL1Q5TC84 451 aaPredicted RBP10.48□□□□□ -0.73
LIG1-212ENST00000596549 DDI2Q5TDH0 399 aa10.48□□□□□ -0.73
LIG1-212ENST00000596549 RSBN1Q5VWQ0 802 aaPredicted RBP10.48□□□□□ -0.73
LIG1-212ENST00000596549 TTC23Q5W5X9 447 aa10.48□□□□□ -0.73
LIG1-212ENST00000596549 DMKNQ6E0U4 476 aaPredicted RBP10.48□□□□□ -0.73
LIG1-212ENST00000596549 C11orf88Q6PI97 169 aa10.48□□□□□ -0.73
LIG1-212ENST00000596549 ASCL4Q6XD76 172 aa10.48□□□□□ -0.73
LIG1-212ENST00000596549 TMPRSS11AQ6ZMR5 421 aa10.48□□□□□ -0.73
LIG1-212ENST00000596549 ABHD12Q8N2K0 398 aa10.48□□□□□ -0.73
LIG1-212ENST00000596549 SETD9Q8NE22 299 aa10.48□□□□□ -0.73
LIG1-212ENST00000596549 OR13A1Q8NGR1 328 aa10.48□□□□□ -0.73
LIG1-212ENST00000596549 OR52N1Q8NH53 320 aa10.48□□□□□ -0.73
LIG1-212ENST00000596549 PLPPR1Q8TBJ4 325 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms