RNA–Protein interactions for RNA: ENST00000595792.1

PNKP-206, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 645 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-206ENST00000595792 TMEM225BP0DP42 221 aa14.37□□□□□ -0.11
PNKP-206ENST00000595792 ERP29P30040 261 aaKnown RBP14.37□□□□□ -0.11
PNKP-206ENST00000595792 P2RX3P56373 397 aa14.37□□□□□ -0.11
PNKP-206ENST00000595792 AESQ08117 197 aa14.37□□□□□ -0.11
PNKP-206ENST00000595792 DYNC1I2Q13409 638 aaKnown RBP14.37□□□□□ -0.11
PNKP-206ENST00000595792 SSX2Q16385 188 aa14.37□□□□□ -0.11
PNKP-206ENST00000595792 UTF1Q5T230 341 aa14.37□□□□□ -0.11
PNKP-206ENST00000595792 OGFRL1Q5TC84 451 aaPredicted RBP14.37□□□□□ -0.11
PNKP-206ENST00000595792 TTC23Q5W5X9 447 aa14.37□□□□□ -0.11
PNKP-206ENST00000595792 RPL22L1Q6P5R6 122 aaKnown RBP14.37□□□□□ -0.11
PNKP-206ENST00000595792 DHRSXQ8N5I4 330 aa14.37□□□□□ -0.11
PNKP-206ENST00000595792 PACRGLQ8N7B6 248 aa14.37□□□□□ -0.11
PNKP-206ENST00000595792 NPFFR1Q9GZQ6 430 aa14.37□□□□□ -0.11
PNKP-206ENST00000595792 RANBP3Q9H6Z4 567 aaPredicted RBP14.37□□□□□ -0.11
PNKP-206ENST00000595792 C8orf4Q9NR00 106 aa14.37□□□□□ -0.11
PNKP-206ENST00000595792 ZNF581Q9P0T4 197 aa14.37□□□□□ -0.11
PNKP-206ENST00000595792 G3V4G9 280 aa14.36□□□□□ -0.11
PNKP-206ENST00000595792 CASQ2O14958 399 aaPredicted RBP14.36□□□□□ -0.11
PNKP-206ENST00000595792 SCN1BQ07699 218 aa14.36□□□□□ -0.11
PNKP-206ENST00000595792 ZFP41Q8N8Y5 198 aa14.36□□□□□ -0.11
PNKP-206ENST00000595792 OR13D1Q8NGV5 346 aa14.36□□□□□ -0.11
PNKP-206ENST00000595792 OR10K1Q8NGX5 313 aa14.36□□□□□ -0.11
PNKP-206ENST00000595792 CFHR4Q92496 578 aa14.36□□□□□ -0.11
PNKP-206ENST00000595792 PPIL3Q9H2H8 161 aaKnown RBP14.36□□□□□ -0.11
PNKP-206ENST00000595792 RAB18Q9NP72 206 aa14.36□□□□□ -0.11
PNKP-206ENST00000595792 TCF19Q9Y242 345 aa14.36□□□□□ -0.11
PNKP-206ENST00000595792 TBL2Q9Y4P3 447 aaKnown RBP14.36□□□□□ -0.11
PNKP-206ENST00000595792 SESN1Q9Y6P5 492 aa14.36□□□□□ -0.11
PNKP-206ENST00000595792 IGHV2-26A0A0B4J1V2 119 aa14.35□□□□□ -0.11
PNKP-206ENST00000595792 VGLL3A8MV65 326 aa14.35□□□□□ -0.11
PNKP-206ENST00000595792 XPNPEP2O43895 674 aa14.35□□□□□ -0.11
PNKP-206ENST00000595792 RPSAP08865 295 aaKnown RBP14.35□□□□□ -0.11
PNKP-206ENST00000595792 ZNF44P15621 663 aa14.35□□□□□ -0.11
PNKP-206ENST00000595792 RPS11P62280 158 aaKnown RBP eCLIP14.35□□□□□ -0.11
PNKP-206ENST00000595792 CCDC58Q4VC31 144 aa14.35□□□□□ -0.11
PNKP-206ENST00000595792 PRAMEF5Q5TYX0 476 aa14.35□□□□□ -0.11
PNKP-206ENST00000595792 Q6ZS46 218 aa14.35□□□□□ -0.11
PNKP-206ENST00000595792 PXT1Q8NFP0 134 aa14.35□□□□□ -0.11
PNKP-206ENST00000595792 GPR148Q8TDV2 347 aa14.35□□□□□ -0.11
PNKP-206ENST00000595792 FBLIM1Q8WUP2 373 aa14.35□□□□□ -0.11
PNKP-206ENST00000595792 CORO2AQ92828 525 aa14.35□□□□□ -0.11
PNKP-206ENST00000595792 TMEM133Q9H2Q1 129 aa14.35□□□□□ -0.11
PNKP-206ENST00000595792 SERTAD4Q9NUC0 356 aa14.35□□□□□ -0.11
PNKP-206ENST00000595792 BABAM2Q9NXR7 383 aa14.35□□□□□ -0.11
PNKP-206ENST00000595792 EXOSC1Q9Y3B2 195 aaKnown RBP14.35□□□□□ -0.11
PNKP-206ENST00000595792 HILPDAQ9Y5L2 63 aa14.35□□□□□ -0.11
PNKP-206ENST00000595792 TRBV5-5A0A0J9YX44 114 aa14.34□□□□□ -0.11
PNKP-206ENST00000595792 FAM172BPA6NC97 362 aa14.34□□□□□ -0.11
PNKP-206ENST00000595792 MAGEA13PA6NCF6 341 aa14.34□□□□□ -0.11
PNKP-206ENST00000595792 A6NDX4 124 aa14.34□□□□□ -0.11
PNKP-206ENST00000595792 RAB3AP20336 220 aa14.34□□□□□ -0.11
PNKP-206ENST00000595792 CAPGP40121 348 aa14.34□□□□□ -0.11
PNKP-206ENST00000595792 OR3A4PP47883 348 aa14.34□□□□□ -0.11
PNKP-206ENST00000595792 DMKNQ6E0U4 476 aaPredicted RBP14.34□□□□□ -0.11
PNKP-206ENST00000595792 ELP2Q6IA86 826 aa14.34□□□□□ -0.11
PNKP-206ENST00000595792 ASCL4Q6XD76 172 aa14.34□□□□□ -0.11
PNKP-206ENST00000595792 TMPRSS11AQ6ZMR5 421 aa14.34□□□□□ -0.11
PNKP-206ENST00000595792 LIAT1Q6ZQX7 453 aa14.34□□□□□ -0.11
PNKP-206ENST00000595792 SATL1Q86VE3 508 aa14.34□□□□□ -0.11
PNKP-206ENST00000595792 SETD9Q8NE22 299 aa14.34□□□□□ -0.11
PNKP-206ENST00000595792 Q8NFD4 153 aa14.34□□□□□ -0.11
PNKP-206ENST00000595792 HAVCR2Q8TDQ0 301 aa14.34□□□□□ -0.11
PNKP-206ENST00000595792 TMEM106AQ96A25 262 aa14.34□□□□□ -0.11
PNKP-206ENST00000595792 FOXRED1Q96CU9 486 aaPredicted RBP14.34□□□□□ -0.11
PNKP-206ENST00000595792 SMIM19Q96E16 107 aa14.34□□□□□ -0.11
PNKP-206ENST00000595792 MALSU1Q96EH3 234 aa14.34□□□□□ -0.11
PNKP-206ENST00000595792 TMEM80Q96HE8 168 aa14.34□□□□□ -0.11
PNKP-206ENST00000595792 PGLYRP3Q96LB9 341 aa14.34□□□□□ -0.11
PNKP-206ENST00000595792 OR5M11Q96RB7 305 aa14.34□□□□□ -0.11
PNKP-206ENST00000595792 NR1H4Q96RI1 486 aaPredicted RBP14.34□□□□□ -0.11
PNKP-206ENST00000595792 RHOFQ9HBH0 211 aa14.34□□□□□ -0.11
PNKP-206ENST00000595792 ABCB10Q9NRK6 738 aa14.34□□□□□ -0.11
PNKP-206ENST00000595792 ING3Q9NXR8 418 aa14.34□□□□□ -0.11
PNKP-206ENST00000595792 NKX1-2Q9UD57 310 aaPredicted RBP14.34□□□□□ -0.11
PNKP-206ENST00000595792 GLS2Q9UI32 602 aa14.34□□□□□ -0.11
PNKP-206ENST00000595792 ZNF281Q9Y2X9 895 aa14.34□□□□□ -0.11
PNKP-206ENST00000595792 UBE2J1Q9Y385 318 aaPredicted RBP14.34□□□□□ -0.11
PNKP-206ENST00000595792 TRAV24A0A0B4J272 114 aa14.33□□□□□ -0.12
PNKP-206ENST00000595792 PRB2P02812 416 aaPredicted RBP14.33□□□□□ -0.12
PNKP-206ENST00000595792 CSN2P05814 226 aa14.33□□□□□ -0.12
PNKP-206ENST00000595792 CD28P10747 220 aa14.33□□□□□ -0.12
PNKP-206ENST00000595792 IGFBP3P17936 291 aaPredicted RBP14.33□□□□□ -0.12
PNKP-206ENST00000595792 MTNR1BP49286 362 aa14.33□□□□□ -0.12
PNKP-206ENST00000595792 ST3GAL4Q11206 333 aa14.33□□□□□ -0.12
PNKP-206ENST00000595792 ATXN7L3Q14CW9 347 aaPredicted RBP14.33□□□□□ -0.12
PNKP-206ENST00000595792 C17orf58Q2M2W7 97 aa14.33□□□□□ -0.12
PNKP-206ENST00000595792 NSUN5P1Q3KNT7 163 aa14.33□□□□□ -0.12
PNKP-206ENST00000595792 TMEM95Q3KNT9 176 aa14.33□□□□□ -0.12
PNKP-206ENST00000595792 PIGYQ3MUY2 71 aa14.33□□□□□ -0.12
PNKP-206ENST00000595792 FBLN7Q53RD9 439 aa14.33□□□□□ -0.12
PNKP-206ENST00000595792 C11orf88Q6PI97 169 aa14.33□□□□□ -0.12
PNKP-206ENST00000595792 TRAPPC6BQ86SZ2 158 aa14.33□□□□□ -0.12
PNKP-206ENST00000595792 OR51T1Q8NGJ9 327 aa14.33□□□□□ -0.12
PNKP-206ENST00000595792 OR4P4Q8NGL7 312 aa14.33□□□□□ -0.12
PNKP-206ENST00000595792 OR52N1Q8NH53 320 aa14.33□□□□□ -0.12
PNKP-206ENST00000595792 TNFAIP8L1Q8WVP5 186 aa14.33□□□□□ -0.12
PNKP-206ENST00000595792 GHSRQ92847 366 aa14.33□□□□□ -0.12
PNKP-206ENST00000595792 PLXNB1O43157 2135 aa14.33□□□□□ -0.12
PNKP-206ENST00000595792 IRGMA1A4Y4 181 aa14.32□□□□□ -0.12
PNKP-206ENST00000595792 ODAMA1E959 279 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms