RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 Q6P435 159 aa12.27□□□□□ -0.45
TRIM28-205ENST00000595028 SATL1Q86VE3 508 aa12.27□□□□□ -0.45
TRIM28-205ENST00000595028 OR13D1Q8NGV5 346 aa12.27□□□□□ -0.45
TRIM28-205ENST00000595028 ORAI1Q96D31 301 aa12.27□□□□□ -0.45
TRIM28-205ENST00000595028 NKX3-1Q99801 234 aaPredicted RBP12.27□□□□□ -0.45
TRIM28-205ENST00000595028 FAM192AQ9GZU8 254 aa12.27□□□□□ -0.45
TRIM28-205ENST00000595028 PPA2Q9H2U2 334 aa12.27□□□□□ -0.45
TRIM28-205ENST00000595028 BEX1Q9HBH7 125 aa12.27□□□□□ -0.45
TRIM28-205ENST00000595028 TMEM138Q9NPI0 162 aa12.27□□□□□ -0.45
TRIM28-205ENST00000595028 H3BUX3 64 aa12.26□□□□□ -0.45
TRIM28-205ENST00000595028 SLC33A1O00400 549 aaPredicted RBP12.26□□□□□ -0.45
TRIM28-205ENST00000595028 RRP9O43818 475 aaKnown RBP12.26□□□□□ -0.45
TRIM28-205ENST00000595028 ALDOBP05062 364 aa12.26□□□□□ -0.45
TRIM28-205ENST00000595028 FSTP19883 344 aa12.26□□□□□ -0.45
TRIM28-205ENST00000595028 BDKRB2P30411 391 aa12.26□□□□□ -0.45
TRIM28-205ENST00000595028 OR3A4PP47883 348 aa12.26□□□□□ -0.45
TRIM28-205ENST00000595028 LGALS4P56470 323 aa12.26□□□□□ -0.45
TRIM28-205ENST00000595028 RIPK1Q13546 671 aa12.26□□□□□ -0.45
TRIM28-205ENST00000595028 DOC2BQ14184 412 aa12.26□□□□□ -0.45
TRIM28-205ENST00000595028 IL13RA2Q14627 380 aa12.26□□□□□ -0.45
TRIM28-205ENST00000595028 AANATQ16613 207 aa12.26□□□□□ -0.45
TRIM28-205ENST00000595028 LRRC75BQ2VPJ9 315 aa12.26□□□□□ -0.45
TRIM28-205ENST00000595028 ZNF626Q68DY1 528 aa12.26□□□□□ -0.45
TRIM28-205ENST00000595028 DHRS7BQ6IAN0 325 aaPredicted RBP12.26□□□□□ -0.45
TRIM28-205ENST00000595028 ASCL4Q6XD76 172 aa12.26□□□□□ -0.45
TRIM28-205ENST00000595028 TRAPPC6BQ86SZ2 158 aa12.26□□□□□ -0.45
TRIM28-205ENST00000595028 OR11H6Q8NGC7 330 aa12.26□□□□□ -0.45
TRIM28-205ENST00000595028 WFDC12Q8WWY7 111 aa12.26□□□□□ -0.45
TRIM28-205ENST00000595028 COQ2Q96H96 371 aa12.26□□□□□ -0.45
TRIM28-205ENST00000595028 SLITRK2Q9H156 845 aa12.26□□□□□ -0.45
TRIM28-205ENST00000595028 UBE2J1Q9Y385 318 aaPredicted RBP12.26□□□□□ -0.45
TRIM28-205ENST00000595028 SESN1Q9Y6P5 492 aa12.26□□□□□ -0.45
TRIM28-205ENST00000595028 KMT2CQ8NEZ4 4911 aaKnown RBP12.26□□□□□ -0.45
TRIM28-205ENST00000595028 TRGV10A0A0A0MS01 117 aa12.25□□□□□ -0.45
TRIM28-205ENST00000595028 PNMA8CA0A1B0GUJ8 204 aa12.25□□□□□ -0.45
TRIM28-205ENST00000595028 ODAMA1E959 279 aa12.25□□□□□ -0.45
TRIM28-205ENST00000595028 CLPSL1A2RUU4 121 aa12.25□□□□□ -0.45
TRIM28-205ENST00000595028 FUOMA2VDF0 154 aa12.25□□□□□ -0.45
TRIM28-205ENST00000595028 MAGEA13PA6NCF6 341 aa12.25□□□□□ -0.45
TRIM28-205ENST00000595028 FAM90A8PA6NJQ4 464 aa12.25□□□□□ -0.45
TRIM28-205ENST00000595028 DEGS1O15121 323 aa12.25□□□□□ -0.45
TRIM28-205ENST00000595028 ARG1P05089 322 aa12.25□□□□□ -0.45
TRIM28-205ENST00000595028 IGFBP3P17936 291 aaPredicted RBP12.25□□□□□ -0.45
TRIM28-205ENST00000595028 PAX6P26367 422 aa12.25□□□□□ -0.45
TRIM28-205ENST00000595028 ZNF93P35789 620 aaPredicted RBP12.25□□□□□ -0.45
TRIM28-205ENST00000595028 SCN1BQ07699 218 aa12.25□□□□□ -0.45
TRIM28-205ENST00000595028 ATXN7L3Q14CW9 347 aaPredicted RBP12.25□□□□□ -0.45
TRIM28-205ENST00000595028 RSU1Q15404 277 aa12.25□□□□□ -0.45
TRIM28-205ENST00000595028 OLFML2AQ68BL7 652 aa12.25□□□□□ -0.45
TRIM28-205ENST00000595028 LHFPL4Q7Z7J7 247 aa12.25□□□□□ -0.45
TRIM28-205ENST00000595028 NANOGP1Q8N7R0 232 aa12.25□□□□□ -0.45
TRIM28-205ENST00000595028 Q8NFD4 153 aa12.25□□□□□ -0.45
TRIM28-205ENST00000595028 OR51T1Q8NGJ9 327 aa12.25□□□□□ -0.45
TRIM28-205ENST00000595028 OR10K1Q8NGX5 313 aa12.25□□□□□ -0.45
TRIM28-205ENST00000595028 FOXRED1Q96CU9 486 aaPredicted RBP12.25□□□□□ -0.45
TRIM28-205ENST00000595028 OR14A2Q96R54 314 aa12.25□□□□□ -0.45
TRIM28-205ENST00000595028 SSX3Q99909 188 aa12.25□□□□□ -0.45
TRIM28-205ENST00000595028 MEGF9Q9H1U4 602 aa12.25□□□□□ -0.45
TRIM28-205ENST00000595028 IL36GQ9NZH8 169 aa12.25□□□□□ -0.45
TRIM28-205ENST00000595028 CKLFQ9UBR5 152 aa12.25□□□□□ -0.45
TRIM28-205ENST00000595028 TBL2Q9Y4P3 447 aaKnown RBP12.25□□□□□ -0.45
TRIM28-205ENST00000595028 TRAV8-7A0A075B6U6 113 aa12.24□□□□□ -0.45
TRIM28-205ENST00000595028 TRBV5-7A0A0A0MS05 114 aa12.24□□□□□ -0.45
TRIM28-205ENST00000595028 GPX5O75715 221 aa12.24□□□□□ -0.45
TRIM28-205ENST00000595028 CDRT1O95170 752 aa12.24□□□□□ -0.45
TRIM28-205ENST00000595028 CD1AP06126 327 aa12.24□□□□□ -0.45
TRIM28-205ENST00000595028 CDK1P06493 297 aa12.24□□□□□ -0.45
TRIM28-205ENST00000595028 CELP19835 753 aa12.24□□□□□ -0.45
TRIM28-205ENST00000595028 PTGFRP43088 359 aa12.24□□□□□ -0.45
TRIM28-205ENST00000595028 GLIPR1P48060 266 aa12.24□□□□□ -0.45
TRIM28-205ENST00000595028 BDH1Q02338 343 aa12.24□□□□□ -0.45
TRIM28-205ENST00000595028 AESQ08117 197 aa12.24□□□□□ -0.45
TRIM28-205ENST00000595028 C6orf141Q5SZD1 244 aa12.24□□□□□ -0.45
TRIM28-205ENST00000595028 RNLSQ5VYX0 342 aa12.24□□□□□ -0.45
TRIM28-205ENST00000595028 Q6ZSV7 163 aa12.24□□□□□ -0.45
TRIM28-205ENST00000595028 ZNF184Q99676 751 aaPredicted RBP12.24□□□□□ -0.45
TRIM28-205ENST00000595028 GAL3ST2Q9H3Q3 398 aa12.24□□□□□ -0.45
TRIM28-205ENST00000595028 ERGIC3Q9Y282 383 aa12.24□□□□□ -0.45
TRIM28-205ENST00000595028 IGHV2-26A0A0B4J1V2 119 aa12.23□□□□□ -0.45
TRIM28-205ENST00000595028 TRAV24A0A0B4J272 114 aa12.23□□□□□ -0.45
TRIM28-205ENST00000595028 VGLL3A8MV65 326 aa12.23□□□□□ -0.45
TRIM28-205ENST00000595028 HSPB6O14558 160 aa12.23□□□□□ -0.45
TRIM28-205ENST00000595028 MMP23AO75900 390 aa12.23□□□□□ -0.45
TRIM28-205ENST00000595028 HTR3BO95264 441 aa12.23□□□□□ -0.45
TRIM28-205ENST00000595028 TGFBR2P37173 567 aa12.23□□□□□ -0.45
TRIM28-205ENST00000595028 LY6EQ16553 131 aa12.23□□□□□ -0.45
TRIM28-205ENST00000595028 PIGYQ3MUY2 71 aa12.23□□□□□ -0.45
TRIM28-205ENST00000595028 PAN3Q58A45 887 aaKnown RBP12.23□□□□□ -0.45
TRIM28-205ENST00000595028 NHLRC3Q5JS37 347 aa12.23□□□□□ -0.45
TRIM28-205ENST00000595028 KRBOX4Q5JUW0 171 aa12.23□□□□□ -0.45
TRIM28-205ENST00000595028 LDLRAD2Q5SZI1 272 aa12.23□□□□□ -0.45
TRIM28-205ENST00000595028 PRAMEF5Q5TYX0 476 aa12.23□□□□□ -0.45
TRIM28-205ENST00000595028 TREML4Q6UXN2 200 aa12.23□□□□□ -0.45
TRIM28-205ENST00000595028 DYNAPQ8N1N2 210 aa12.23□□□□□ -0.45
TRIM28-205ENST00000595028 LINC01006Q8NI28 216 aa12.23□□□□□ -0.45
TRIM28-205ENST00000595028 CORO2AQ92828 525 aa12.23□□□□□ -0.45
TRIM28-205ENST00000595028 DERL3Q96Q80 235 aa12.23□□□□□ -0.45
TRIM28-205ENST00000595028 NR1H4Q96RI1 486 aaPredicted RBP12.23□□□□□ -0.45
TRIM28-205ENST00000595028 MND1Q9BWT6 205 aa12.23□□□□□ -0.45
TRIM28-205ENST00000595028 CDCA4Q9BXL8 241 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms