RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 PPA2Q9H2U2 334 aa7.72□□□□□ -1.17
BRCA1-226ENST00000591534 SLC25A10Q9UBX3 287 aaPredicted RBP7.72□□□□□ -1.17
BRCA1-226ENST00000591534 NUFIP1Q9UHK0 495 aaKnown RBP7.72□□□□□ -1.17
BRCA1-226ENST00000591534 LRP12Q9Y561 859 aa7.72□□□□□ -1.17
BRCA1-226ENST00000591534 CEPT1Q9Y6K0 416 aa7.72□□□□□ -1.17
BRCA1-226ENST00000591534 NOTCH1P46531 2555 aa7.72□□□□□ -1.17
BRCA1-226ENST00000591534 LOC100506127A0A0U1RQW1 187 aa7.71□□□□□ -1.18
BRCA1-226ENST00000591534 H3BUI4 141 aa7.71□□□□□ -1.18
BRCA1-226ENST00000591534 APOL3O95236 402 aa7.71□□□□□ -1.18
BRCA1-226ENST00000591534 OPN1MWP04001 364 aa7.71□□□□□ -1.18
BRCA1-226ENST00000591534 OCM2P0CE71 109 aa7.71□□□□□ -1.18
BRCA1-226ENST00000591534 OCMP0CE72 109 aaPredicted RBP7.71□□□□□ -1.18
BRCA1-226ENST00000591534 OPN1MW2P0DN77 364 aa7.71□□□□□ -1.18
BRCA1-226ENST00000591534 OPN1MW3P0DN78 364 aa7.71□□□□□ -1.18
BRCA1-226ENST00000591534 SAA4P35542 130 aa7.71□□□□□ -1.18
BRCA1-226ENST00000591534 KIR2DS4P43632 304 aa7.71□□□□□ -1.18
BRCA1-226ENST00000591534 CAV3P56539 151 aa7.71□□□□□ -1.18
BRCA1-226ENST00000591534 ODF1Q14990 250 aa7.71□□□□□ -1.18
BRCA1-226ENST00000591534 GFOD2Q3B7J2 385 aa7.71□□□□□ -1.18
BRCA1-226ENST00000591534 TP53I3Q53FA7 332 aa7.71□□□□□ -1.18
BRCA1-226ENST00000591534 CT83Q5H943 113 aa7.71□□□□□ -1.18
BRCA1-226ENST00000591534 STUMQ69YW2 141 aa7.71□□□□□ -1.18
BRCA1-226ENST00000591534 SLC35E4Q6ICL7 350 aa7.71□□□□□ -1.18
BRCA1-226ENST00000591534 FAM57BQ71RH2 274 aa7.71□□□□□ -1.18
BRCA1-226ENST00000591534 C1QL4Q86Z23 238 aa7.71□□□□□ -1.18
BRCA1-226ENST00000591534 C11orf53Q8IXP5 236 aa7.71□□□□□ -1.18
BRCA1-226ENST00000591534 ELMOD2Q8IZ81 293 aa7.71□□□□□ -1.18
BRCA1-226ENST00000591534 OR4S1Q8NGB4 309 aa7.71□□□□□ -1.18
BRCA1-226ENST00000591534 RPS4Y2Q8TD47 263 aa7.71□□□□□ -1.18
BRCA1-226ENST00000591534 C15orf40Q8WUR7 153 aa7.71□□□□□ -1.18
BRCA1-226ENST00000591534 S100ZQ8WXG8 99 aa7.71□□□□□ -1.18
BRCA1-226ENST00000591534 PP6455Q8WZ26 134 aa7.71□□□□□ -1.18
BRCA1-226ENST00000591534 SGK3Q96BR1 496 aa7.71□□□□□ -1.18
BRCA1-226ENST00000591534 ZNF649Q9BS31 505 aa7.71□□□□□ -1.18
BRCA1-226ENST00000591534 NPFFR1Q9GZQ6 430 aa7.71□□□□□ -1.18
BRCA1-226ENST00000591534 RBM38Q9H0Z9 239 aaKnown RBP7.71□□□□□ -1.18
BRCA1-226ENST00000591534 TLNRD1Q9H1K6 362 aa7.71□□□□□ -1.18
BRCA1-226ENST00000591534 RANBP3Q9H6Z4 567 aaPredicted RBP7.71□□□□□ -1.18
BRCA1-226ENST00000591534 PLEKHA1Q9HB21 404 aa7.71□□□□□ -1.18
BRCA1-226ENST00000591534 PCDHB16Q9NRJ7 776 aa7.71□□□□□ -1.18
BRCA1-226ENST00000591534 SNTG1Q9NSN8 517 aa7.71□□□□□ -1.18
BRCA1-226ENST00000591534 CCDC59Q9P031 241 aaKnown RBP7.71□□□□□ -1.18
BRCA1-226ENST00000591534 MRM2Q9UI43 246 aaKnown RBP7.71□□□□□ -1.18
BRCA1-226ENST00000591534 OR52A1Q9UKL2 312 aa7.71□□□□□ -1.18
BRCA1-226ENST00000591534 GTF2A1LQ9UNN4 478 aa7.71□□□□□ -1.18
BRCA1-226ENST00000591534 DHDHQ9UQ10 334 aa7.71□□□□□ -1.18
BRCA1-226ENST00000591534 MAB21L2Q9Y586 359 aa7.71□□□□□ -1.18
BRCA1-226ENST00000591534 hCG_38984A0A1B0GV85 526 aa7.7□□□□□ -1.18
BRCA1-226ENST00000591534 A0A1W2PRD5 423 aa7.7□□□□□ -1.18
BRCA1-226ENST00000591534 A0A1W2PRF3 423 aa7.7□□□□□ -1.18
BRCA1-226ENST00000591534 A0A1W2PRM7 423 aa7.7□□□□□ -1.18
BRCA1-226ENST00000591534 H3BMQ9 156 aa7.7□□□□□ -1.18
BRCA1-226ENST00000591534 H3BUX3 64 aa7.7□□□□□ -1.18
BRCA1-226ENST00000591534 SIGLEC5O15389 551 aa7.7□□□□□ -1.18
BRCA1-226ENST00000591534 SYT7O43581 403 aa7.7□□□□□ -1.18
BRCA1-226ENST00000591534 RPP14O95059 124 aaKnown RBP7.7□□□□□ -1.18
BRCA1-226ENST00000591534 CST4P01036 141 aa7.7□□□□□ -1.18
BRCA1-226ENST00000591534 ACAA1P09110 424 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-226ENST00000591534 HCCSP53701 268 aa7.7□□□□□ -1.18
BRCA1-226ENST00000591534 LGALS4P56470 323 aa7.7□□□□□ -1.18
BRCA1-226ENST00000591534 ZNF121P58317 390 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-226ENST00000591534 CTF1Q16619 201 aa7.7□□□□□ -1.18
BRCA1-226ENST00000591534 HSD17B12Q53GQ0 312 aa7.7□□□□□ -1.18
BRCA1-226ENST00000591534 TEPPQ6URK8 271 aa7.7□□□□□ -1.18
BRCA1-226ENST00000591534 ZNF788Q6ZQV5 615 aa7.7□□□□□ -1.18
BRCA1-226ENST00000591534 COMMD2Q86X83 199 aa7.7□□□□□ -1.18
BRCA1-226ENST00000591534 CATSPERDQ86XM0 798 aa7.7□□□□□ -1.18
BRCA1-226ENST00000591534 SERPINA12Q8IW75 414 aa7.7□□□□□ -1.18
BRCA1-226ENST00000591534 OR5T2Q8NGG2 359 aa7.7□□□□□ -1.18
BRCA1-226ENST00000591534 ZNF671Q8TAW3 534 aa7.7□□□□□ -1.18
BRCA1-226ENST00000591534 TSEN15Q8WW01 171 aaKnown RBP7.7□□□□□ -1.18
BRCA1-226ENST00000591534 RNF170Q96K19 258 aa7.7□□□□□ -1.18
BRCA1-226ENST00000591534 CMTM3Q96MX0 182 aa7.7□□□□□ -1.18
BRCA1-226ENST00000591534 TSC22D3Q99576 134 aa7.7□□□□□ -1.18
BRCA1-226ENST00000591534 SSX3Q99909 188 aa7.7□□□□□ -1.18
BRCA1-226ENST00000591534 CHCHD6Q9BRQ6 235 aa7.7□□□□□ -1.18
BRCA1-226ENST00000591534 TMED9Q9BVK6 235 aa7.7□□□□□ -1.18
BRCA1-226ENST00000591534 DCSTAMPQ9H295 470 aa7.7□□□□□ -1.18
BRCA1-226ENST00000591534 PPP1R3EQ9H7J1 279 aa7.7□□□□□ -1.18
BRCA1-226ENST00000591534 HEXA-AS1Q9H8Q6 139 aa7.7□□□□□ -1.18
BRCA1-226ENST00000591534 ISG20L2Q9H9L3 353 aaKnown RBP7.7□□□□□ -1.18
BRCA1-226ENST00000591534 ZNF319Q9P2F9 582 aa7.7□□□□□ -1.18
BRCA1-226ENST00000591534 NLKQ9UBE8 527 aa7.7□□□□□ -1.18
BRCA1-226ENST00000591534 COPS3Q9UNS2 423 aa7.7□□□□□ -1.18
BRCA1-226ENST00000591534 FOXJ3Q9UPW0 622 aa7.7□□□□□ -1.18
BRCA1-226ENST00000591534 KLHDC2Q9Y2U9 406 aa7.7□□□□□ -1.18
BRCA1-226ENST00000591534 RHBDD3Q9Y3P4 386 aa7.7□□□□□ -1.18
BRCA1-226ENST00000591534 PEX16Q9Y5Y5 336 aa7.7□□□□□ -1.18
BRCA1-226ENST00000591534 DOCK11Q5JSL3 2073 aa7.69□□□□□ -1.18
BRCA1-226ENST00000591534 OR2AT4A6NND4 320 aa7.69□□□□□ -1.18
BRCA1-226ENST00000591534 ZNF850A8MQ14 1090 aa7.69□□□□□ -1.18
BRCA1-226ENST00000591534 PRR32B1ATL7 298 aa7.69□□□□□ -1.18
BRCA1-226ENST00000591534 PIN1P1O15428 100 aa7.69□□□□□ -1.18
BRCA1-226ENST00000591534 PEX14O75381 377 aa7.69□□□□□ -1.18
BRCA1-226ENST00000591534 SCGNO76038 276 aa7.69□□□□□ -1.18
BRCA1-226ENST00000591534 SCGB1D2O95969 90 aa7.69□□□□□ -1.18
BRCA1-226ENST00000591534 ZNF20P17024 532 aa7.69□□□□□ -1.18
BRCA1-226ENST00000591534 GLRA1P23415 457 aa7.69□□□□□ -1.18
BRCA1-226ENST00000591534 GADD45AP24522 165 aa7.69□□□□□ -1.18
BRCA1-226ENST00000591534 GABRA2P47869 451 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms