RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 COL10A1Q03692 680 aa8.38□□□□□ -1.07
VPS4B-207ENST00000591519 MED21Q13503 144 aa8.38□□□□□ -1.07
VPS4B-207ENST00000591519 CNN3Q15417 329 aaKnown RBP8.38□□□□□ -1.07
VPS4B-207ENST00000591519 FDX2Q6P4F2 183 aa8.38□□□□□ -1.07
VPS4B-207ENST00000591519 ZNF782Q6ZMW2 699 aaPredicted RBP8.38□□□□□ -1.07
VPS4B-207ENST00000591519 REC114Q7Z4M0 266 aa8.38□□□□□ -1.07
VPS4B-207ENST00000591519 OR8H2Q8N162 312 aa8.38□□□□□ -1.07
VPS4B-207ENST00000591519 OR5AK2Q8NH90 309 aa8.38□□□□□ -1.07
VPS4B-207ENST00000591519 RPS4Y2Q8TD47 263 aa8.38□□□□□ -1.07
VPS4B-207ENST00000591519 FBLIM1Q8WUP2 373 aa8.38□□□□□ -1.07
VPS4B-207ENST00000591519 SGCDQ92629 289 aa8.38□□□□□ -1.07
VPS4B-207ENST00000591519 RFT1Q96AA3 541 aa8.38□□□□□ -1.07
VPS4B-207ENST00000591519 CEP19Q96LK0 163 aa8.38□□□□□ -1.07
VPS4B-207ENST00000591519 CNBD2Q96M20 576 aa8.38□□□□□ -1.07
VPS4B-207ENST00000591519 COMMD4Q9H0A8 199 aa8.38□□□□□ -1.07
VPS4B-207ENST00000591519 PSORS1C1Q9UIG5 152 aa8.38□□□□□ -1.07
VPS4B-207ENST00000591519 PITPNC1Q9UKF7 332 aa8.38□□□□□ -1.07
VPS4B-207ENST00000591519 HHLA2Q9UM44 414 aa8.38□□□□□ -1.07
VPS4B-207ENST00000591519 RRP15Q9Y3B9 282 aaKnown RBP8.38□□□□□ -1.07
VPS4B-207ENST00000591519 SIRT4Q9Y6E7 314 aaPredicted RBP8.38□□□□□ -1.07
VPS4B-207ENST00000591519 NOTCH3Q9UM47 2321 aa8.38□□□□□ -1.07
VPS4B-207ENST00000591519 IGKV1-27A0A075B6S5 117 aa8.37□□□□□ -1.07
VPS4B-207ENST00000591519 TMEM82A0PJX8 343 aa8.37□□□□□ -1.07
VPS4B-207ENST00000591519 FAM90A22PA8MWA6 464 aa8.37□□□□□ -1.07
VPS4B-207ENST00000591519 H0YJX3 145 aa8.37□□□□□ -1.07
VPS4B-207ENST00000591519 GATBO75879 557 aaKnown RBP8.37□□□□□ -1.07
VPS4B-207ENST00000591519 ZFPL1O95159 310 aa8.37□□□□□ -1.07
VPS4B-207ENST00000591519 LALBAP00709 142 aa8.37□□□□□ -1.07
VPS4B-207ENST00000591519 SERPINA3P01011 423 aa8.37□□□□□ -1.07
VPS4B-207ENST00000591519 ARG1P05089 322 aa8.37□□□□□ -1.07
VPS4B-207ENST00000591519 CCDC159P0C7I6 412 aa8.37□□□□□ -1.07
VPS4B-207ENST00000591519 VSIG10L2P0DP72 767 aa8.37□□□□□ -1.07
VPS4B-207ENST00000591519 PIPP12273 146 aaPredicted RBP8.37□□□□□ -1.07
VPS4B-207ENST00000591519 C21orf33P30042 268 aaPredicted RBP8.37□□□□□ -1.07
VPS4B-207ENST00000591519 POU3F4P49335 361 aa8.37□□□□□ -1.07
VPS4B-207ENST00000591519 CCR9P51686 369 aa8.37□□□□□ -1.07
VPS4B-207ENST00000591519 SSX2Q16385 188 aa8.37□□□□□ -1.07
VPS4B-207ENST00000591519 C6orf141Q5SZD1 244 aa8.37□□□□□ -1.07
VPS4B-207ENST00000591519 MINOS1Q5TGZ0 78 aa8.37□□□□□ -1.07
VPS4B-207ENST00000591519 GDPD3Q7L5L3 318 aa8.37□□□□□ -1.07
VPS4B-207ENST00000591519 TCF23Q7RTU1 214 aa8.37□□□□□ -1.07
VPS4B-207ENST00000591519 NDUFA11Q86Y39 141 aa8.37□□□□□ -1.07
VPS4B-207ENST00000591519 EGFL6Q8IUX8 553 aa8.37□□□□□ -1.07
VPS4B-207ENST00000591519 C11orf44Q8N8P7 122 aa8.37□□□□□ -1.07
VPS4B-207ENST00000591519 DNAAF1Q8NEP3 725 aa8.37□□□□□ -1.07
VPS4B-207ENST00000591519 OR13C5Q8NGS8 318 aa8.37□□□□□ -1.07
VPS4B-207ENST00000591519 OR13C9Q8NGT0 318 aa8.37□□□□□ -1.07
VPS4B-207ENST00000591519 SPACA5Q96QH8 159 aa8.37□□□□□ -1.07
VPS4B-207ENST00000591519 NKX3-1Q99801 234 aaPredicted RBP8.37□□□□□ -1.07
VPS4B-207ENST00000591519 JAM3Q9BX67 310 aa8.37□□□□□ -1.07
VPS4B-207ENST00000591519 PRSS22Q9GZN4 317 aa8.37□□□□□ -1.07
VPS4B-207ENST00000591519 CHST5Q9GZS9 411 aa8.37□□□□□ -1.07
VPS4B-207ENST00000591519 DHDHQ9UQ10 334 aa8.37□□□□□ -1.07
VPS4B-207ENST00000591519 MINOS1-NBL1R4GNA1 71 aa8.37□□□□□ -1.07
VPS4B-207ENST00000591519 hADV38S2A0JD32 116 aa8.36□□□□□ -1.07
VPS4B-207ENST00000591519 TMEM212A6NML5 194 aa8.36□□□□□ -1.07
VPS4B-207ENST00000591519 MYL12BO14950 172 aa8.36□□□□□ -1.07
VPS4B-207ENST00000591519 FBXO24O75426 580 aa8.36□□□□□ -1.07
VPS4B-207ENST00000591519 ISG15P05161 165 aa8.36□□□□□ -1.07
VPS4B-207ENST00000591519 CALCBP10092 127 aa8.36□□□□□ -1.07
VPS4B-207ENST00000591519 ATF1P18846 271 aa8.36□□□□□ -1.07
VPS4B-207ENST00000591519 MYF6P23409 242 aa8.36□□□□□ -1.07
VPS4B-207ENST00000591519 ERP29P30040 261 aaKnown RBP8.36□□□□□ -1.07
VPS4B-207ENST00000591519 VHLP40337 213 aa8.36□□□□□ -1.07
VPS4B-207ENST00000591519 EDDM3BP56851 147 aa8.36□□□□□ -1.07
VPS4B-207ENST00000591519 BLCAPP62952 87 aa8.36□□□□□ -1.07
VPS4B-207ENST00000591519 MRPL28Q13084 256 aaKnown RBP8.36□□□□□ -1.07
VPS4B-207ENST00000591519 RIPK1Q13546 671 aa8.36□□□□□ -1.07
VPS4B-207ENST00000591519 HABP2Q14520 560 aaPredicted RBP8.36□□□□□ -1.07
VPS4B-207ENST00000591519 ZNF146Q15072 292 aa8.36□□□□□ -1.07
VPS4B-207ENST00000591519 CDK5R1Q15078 307 aa8.36□□□□□ -1.07
VPS4B-207ENST00000591519 FAM189A2Q15884 450 aa8.36□□□□□ -1.07
VPS4B-207ENST00000591519 HIST2H2BDQ6DRA6 164 aa8.36□□□□□ -1.07
VPS4B-207ENST00000591519 Q6ZPA2 131 aa8.36□□□□□ -1.07
VPS4B-207ENST00000591519 SLC25A26Q70HW3 274 aa8.36□□□□□ -1.07
VPS4B-207ENST00000591519 Q8IYB0 196 aa8.36□□□□□ -1.07
VPS4B-207ENST00000591519 ASCC1Q8N9N2 400 aaKnown RBP8.36□□□□□ -1.07
VPS4B-207ENST00000591519 WFDC9Q8NEX5 89 aa8.36□□□□□ -1.07
VPS4B-207ENST00000591519 OR52N4Q8NGI2 321 aa8.36□□□□□ -1.07
VPS4B-207ENST00000591519 PP6455Q8WZ26 134 aa8.36□□□□□ -1.07
VPS4B-207ENST00000591519 RGP1Q92546 391 aaPredicted RBP8.36□□□□□ -1.07
VPS4B-207ENST00000591519 SLAMF9Q96A28 289 aa8.36□□□□□ -1.07
VPS4B-207ENST00000591519 ORAI1Q96D31 301 aa8.36□□□□□ -1.07
VPS4B-207ENST00000591519 BORCS8Q96FH0 119 aa8.36□□□□□ -1.07
VPS4B-207ENST00000591519 ZNF714Q96N38 554 aa8.36□□□□□ -1.07
VPS4B-207ENST00000591519 ABCB10Q9NRK6 738 aa8.36□□□□□ -1.07
VPS4B-207ENST00000591519 PLCXD1Q9NUJ7 323 aa8.36□□□□□ -1.07
VPS4B-207ENST00000591519 PAK1IP1Q9NWT1 392 aaPredicted RBP8.36□□□□□ -1.07
VPS4B-207ENST00000591519 BABAM2Q9NXR7 383 aa8.36□□□□□ -1.07
VPS4B-207ENST00000591519 SCN3BQ9NY72 215 aa8.36□□□□□ -1.07
VPS4B-207ENST00000591519 CNOT2Q9NZN8 540 aaKnown RBP8.36□□□□□ -1.07
VPS4B-207ENST00000591519 ZNF281Q9Y2X9 895 aa8.36□□□□□ -1.07
VPS4B-207ENST00000591519 PCDHGB5Q9Y5G0 923 aa8.36□□□□□ -1.07
VPS4B-207ENST00000591519 LINC00312Q9Y6C7 94 aa8.36□□□□□ -1.07
VPS4B-207ENST00000591519 IGKV1-9A0A0C4DH69 117 aa8.35□□□□□ -1.07
VPS4B-207ENST00000591519 PSPNO60542 156 aa8.35□□□□□ -1.07
VPS4B-207ENST00000591519 HCKP08631 526 aa8.35□□□□□ -1.07
VPS4B-207ENST00000591519 RPSAP08865 295 aaKnown RBP8.35□□□□□ -1.07
VPS4B-207ENST00000591519 CD28P10747 220 aa8.35□□□□□ -1.07
VPS4B-207ENST00000591519 AZGP1P25311 298 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms