RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, human

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT1-222	ENST00000590619	PLEKHA1	Q9HB21	404 aa		4.83	□□□□□ -1.64
DNMT1-222	ENST00000590619	IL36RN	Q9UBH0	155 aa		4.83	□□□□□ -1.64
DNMT1-222	ENST00000590619	MRM2	Q9UI43	246 aa	Known RBP	4.83	□□□□□ -1.64
DNMT1-222	ENST00000590619	ZNF107	Q9UII5	783 aa	Predicted RBP	4.83	□□□□□ -1.64
DNMT1-222	ENST00000590619	ENPP5	Q9UJA9	477 aa		4.83	□□□□□ -1.64
DNMT1-222	ENST00000590619	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	4.83	□□□□□ -1.64
DNMT1-222	ENST00000590619	IGHV7-81	A0A0B4J1V7	117 aa		4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619	TRBV4-1	A0A0J9YWV2	114 aa		4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619	KBTBD11-OT1	A0A1B0GTJ5	212 aa		4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619		A0A1W2PPE3	182 aa		4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619		A0A1W2PRQ8	180 aa		4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619		M0R2N4	97 aa		4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619	DLGAP1	O14490	977 aa		4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619	ATP6V0E1	O15342	81 aa		4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619	GSC2	O15499	205 aa		4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619	SPRY2	O43597	315 aa		4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619	GYPB	P06028	91 aa		4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619	H2BFM	P0C1H6	154 aa		4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619	INAFM2	P0DMQ5	153 aa		4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619	CALCB	P10092	127 aa		4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619	CLU	P10909	449 aa		4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619	SLC2A2	P11168	524 aa	Predicted RBP	4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619	CD1B	P29016	333 aa		4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619	BMI1	P35226	326 aa		4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619	TCTA	P57738	103 aa		4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619	ZNF91	Q05481	1191 aa		4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619	ZNF816	Q0VGE8	651 aa	Predicted RBP	4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619	KLF10	Q13118	480 aa		4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619	DGCR6	Q14129	220 aa		4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619	LRRC23	Q53EV4	343 aa	Predicted RBP	4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619	C19orf54	Q5BKX5	351 aa		4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619	ZNF684	Q5T5D7	378 aa		4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619	LINC01590	Q5TEZ4	76 aa		4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619	LCN1P1	Q5VSP4	162 aa		4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619	TMEM42	Q69YG0	159 aa		4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619	MNS1	Q8NEH6	495 aa		4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619	OR8H1	Q8NGG4	311 aa		4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619	TSEN15	Q8WW01	171 aa	Known RBP	4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619	SLAMF9	Q96A28	289 aa		4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619	CEP19	Q96LK0	163 aa		4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619	ROPN1B	Q9BZX4	212 aa	Predicted RBP	4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619	PKIB	Q9C010	78 aa		4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619	ANKRD19P	Q9H560	264 aa		4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619	ZCCHC4	Q9H5U6	513 aa		4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619	ROPN1	Q9HAT0	212 aa	Predicted RBP	4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619	SLC2A8	Q9NY64	477 aa		4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619	SLC23A1	Q9UHI7	598 aa		4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619	PIGL	Q9Y2B2	252 aa		4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619	DNAH5	Q8TE73	4624 aa		4.82	□□□□□ -1.64
DNMT1-222	ENST00000590619	ODAM	A1E959	279 aa		4.81	□□□□□ -1.64
DNMT1-222	ENST00000590619		A6NIN4	97 aa		4.81	□□□□□ -1.64
DNMT1-222	ENST00000590619	ZNF729	A6NN14	1252 aa	Predicted RBP	4.81	□□□□□ -1.64
DNMT1-222	ENST00000590619	C16orf90	A8MZG2	172 aa		4.81	□□□□□ -1.64
DNMT1-222	ENST00000590619	HSD17B6	O14756	317 aa		4.81	□□□□□ -1.64
DNMT1-222	ENST00000590619	IGLV3-1	P01715	115 aa		4.81	□□□□□ -1.64
DNMT1-222	ENST00000590619	RBMY1A1	P0DJD3	496 aa	Known RBP	4.81	□□□□□ -1.64
DNMT1-222	ENST00000590619	ATP6V1B1	P15313	513 aa		4.81	□□□□□ -1.64
DNMT1-222	ENST00000590619	PTGFR	P43088	359 aa		4.81	□□□□□ -1.64
DNMT1-222	ENST00000590619	GNG10	P50151	68 aa		4.81	□□□□□ -1.64
DNMT1-222	ENST00000590619	IDH3A	P50213	366 aa		4.81	□□□□□ -1.64
DNMT1-222	ENST00000590619	SYNJ2BP	P57105	145 aa		4.81	□□□□□ -1.64
DNMT1-222	ENST00000590619	NANOS2	P60321	138 aa	Known RBP	4.81	□□□□□ -1.64
DNMT1-222	ENST00000590619	ZNF146	Q15072	292 aa		4.81	□□□□□ -1.64
DNMT1-222	ENST00000590619	CD300E	Q496F6	205 aa	Predicted RBP	4.81	□□□□□ -1.64
DNMT1-222	ENST00000590619	TRPM8	Q7Z2W7	1104 aa		4.81	□□□□□ -1.64
DNMT1-222	ENST00000590619	SLC37A3	Q8NCC5	494 aa		4.81	□□□□□ -1.64
DNMT1-222	ENST00000590619	FANK1	Q8TC84	345 aa		4.81	□□□□□ -1.64
DNMT1-222	ENST00000590619	C2CD4C	Q8TF44	421 aa		4.81	□□□□□ -1.64
DNMT1-222	ENST00000590619	RITA1	Q96K30	269 aa		4.81	□□□□□ -1.64
DNMT1-222	ENST00000590619	MS4A10	Q96PG2	267 aa		4.81	□□□□□ -1.64
DNMT1-222	ENST00000590619	TEAD3	Q99594	435 aa		4.81	□□□□□ -1.64
DNMT1-222	ENST00000590619	EBF4	Q9BQW3	602 aa		4.81	□□□□□ -1.64
DNMT1-222	ENST00000590619	FUZ	Q9BT04	418 aa		4.81	□□□□□ -1.64
DNMT1-222	ENST00000590619	GGTLC1	Q9BX51	225 aa		4.81	□□□□□ -1.64
DNMT1-222	ENST00000590619	NMNAT2	Q9BZQ4	307 aa		4.81	□□□□□ -1.64
DNMT1-222	ENST00000590619	SLC25A19	Q9HC21	320 aa		4.81	□□□□□ -1.64
DNMT1-222	ENST00000590619	RANGRF	Q9HD47	186 aa	Predicted RBP	4.81	□□□□□ -1.64
DNMT1-222	ENST00000590619	SSU72	Q9NP77	194 aa	Known RBP	4.81	□□□□□ -1.64
DNMT1-222	ENST00000590619	PARP11	Q9NR21	331 aa		4.81	□□□□□ -1.64
DNMT1-222	ENST00000590619	DCAF13	Q9NV06	445 aa	Known RBP	4.81	□□□□□ -1.64
DNMT1-222	ENST00000590619	ADAM30	Q9UKF2	790 aa		4.81	□□□□□ -1.64
DNMT1-222	ENST00000590619	COPS3	Q9UNS2	423 aa		4.81	□□□□□ -1.64
DNMT1-222	ENST00000590619	NUBP2	Q9Y5Y2	271 aa		4.81	□□□□□ -1.64
DNMT1-222	ENST00000590619	SRRM2	Q9UQ35	2752 aa	Known RBP	4.81	□□□□□ -1.64
DNMT1-222	ENST00000590619	IGKV1-27	A0A075B6S5	117 aa		4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619		A0A0U1RQV5	110 aa		4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619		A0A1W2PN81	502 aa		4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	FUOM	A2VDF0	154 aa		4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	IGLL5	B9A064	214 aa		4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	SIRPB1	O00241	398 aa		4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	SHOX	O15266	292 aa		4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	IFNA4	P05014	189 aa		4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	H1F0	P07305	194 aa	Known RBP	4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	EGR2	P11161	476 aa	Predicted RBP	4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	H2AFX	P16104	143 aa	Predicted RBP	4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	SPI1	P17947	270 aa		4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	ZP3	P21754	424 aa		4.8	□□□□□ -1.64
DNMT1-222	ENST00000590619	BLVRB	P30043	206 aa	Predicted RBP	4.8	□□□□□ -1.64

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