RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 ACSM3Q53FZ2 586 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 CLVS2Q5SYC1 327 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 PRAMEF6Q5VXH4 476 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 PLCXD3Q63HM9 321 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 OR2T2Q6IF00 324 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 TMEM219Q86XT9 240 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 FAM90A1Q86YD7 464 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 SERPINA12Q8IW75 414 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 ZDHHC23Q8IYP9 409 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 NKAIN3Q8N8D7 197 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 BHLHE23Q8NDY6 225 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 OR8G5Q8NG78 346 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 ST8SIA4Q92187 359 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 PIGCQ92535 297 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 TMEM203Q969S6 136 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 SPSB4Q96A44 273 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 ISOC1Q96CN7 298 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 BORCS8Q96FH0 119 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 KCTD7Q96MP8 289 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 OPALINQ96PE5 141 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 GPER1Q99527 375 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 BCL7BQ9BQE9 202 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 RTL8AQ9BWD3 113 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 FAM234AQ9H0X4 552 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 BATF3Q9NR55 127 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 TMEM100Q9NV29 134 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 MRPL15Q9P015 296 aaKnown RBP4.87□□□□□ -1.63
VPS25-204ENST00000589577 MPC1Q9Y5U8 109 aa4.87□□□□□ -1.63
VPS25-204ENST00000589577 SMIM31A0A1B0GVY4 71 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 TRDV1A0A1B0GX56 115 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 OR5B21A6NL26 309 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 A6NLC8 198 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 TRIM64CA6NLI5 447 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 E9PI62 339 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 H3BSH0 61 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 LGALS8O00214 317 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 GABRPO00591 440 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 SULT1B1O43704 296 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 GMDSO60547 372 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 SRSF10O75494 262 aaKnown RBP4.86□□□□□ -1.63
VPS25-204ENST00000589577 ECDO95905 644 aaPredicted RBP4.86□□□□□ -1.63
VPS25-204ENST00000589577 GYPAP02724 150 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 SMIM18P0DKX4 95 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 IRF2P14316 349 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 CCL1P22362 96 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 CALRP27797 417 aaKnown RBP4.86□□□□□ -1.63
VPS25-204ENST00000589577 VDAC2P45880 294 aaPredicted RBP4.86□□□□□ -1.63
VPS25-204ENST00000589577 ATP1B3P54709 279 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 NANOS3P60323 173 aaKnown RBP4.86□□□□□ -1.63
VPS25-204ENST00000589577 FAM3AP98173 230 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 RSPO1Q2MKA7 263 aaPredicted RBP4.86□□□□□ -1.63
VPS25-204ENST00000589577 GLT8D1Q68CQ7 371 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 XAF1Q6GPH4 301 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 UNQ9370/PRO34162Q6UXP9 181 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 C18orf65Q6ZTR6 163 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 UTS2BQ765I0 119 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 PRSS45Q7RTY3 260 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 OVCH2Q7RTZ1 564 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 CEACAM19Q7Z692 300 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 NAA40Q86UY6 237 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 CLVS1Q8IUQ0 354 aaPredicted RBP4.86□□□□□ -1.63
VPS25-204ENST00000589577 CROCCP3Q8IVE0 287 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 DYNAPQ8N1N2 210 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 PRSS35Q8N3Z0 413 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 DTX3Q8N9I9 347 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 ZNF485Q8NCK3 441 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 OR13F1Q8NGS4 319 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 OR13C9Q8NGT0 318 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 OR11L1Q8NGX0 322 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 RAB2BQ8WUD1 216 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 LINC00476Q8WZB0 136 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 SPSB1Q96BD6 273 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 SGK3Q96BR1 496 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 FGGYQ96C11 551 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 FOXRED1Q96CU9 486 aaPredicted RBP4.86□□□□□ -1.63
VPS25-204ENST00000589577 LYZL4Q96KX0 146 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 PGLYRP3Q96LB9 341 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 OR14A2Q96R54 314 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 CHCHD6Q9BRQ6 235 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 ZNF649Q9BS31 505 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 ADAT1Q9BUB4 502 aaKnown RBP4.86□□□□□ -1.63
VPS25-204ENST00000589577 MCRIP2Q9BUT9 160 aaKnown RBP4.86□□□□□ -1.63
VPS25-204ENST00000589577 PRSS22Q9GZN4 317 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 CHST5Q9GZS9 411 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 FAM192AQ9GZU8 254 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 ZCCHC4Q9H5U6 513 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 PCDHB16Q9NRJ7 776 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 SNTG1Q9NSN8 517 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 UFSP2Q9NUQ7 469 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 KAAG1Q9UBP8 84 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 TCF19Q9Y242 345 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 POLDIP2Q9Y2S7 368 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 V9GYS6 101 aa4.86□□□□□ -1.63
VPS25-204ENST00000589577 TRBV5-5A0A0J9YX44 114 aa4.85□□□□□ -1.63
VPS25-204ENST00000589577 hCG_1807616A0A1W2PRN6 198 aa4.85□□□□□ -1.63
VPS25-204ENST00000589577 A6NDX4 124 aa4.85□□□□□ -1.63
VPS25-204ENST00000589577 OOEPA6NGQ2 149 aa4.85□□□□□ -1.63
VPS25-204ENST00000589577 TMEM210A6NLX4 147 aa4.85□□□□□ -1.63
VPS25-204ENST00000589577 ZNF850A8MQ14 1090 aa4.85□□□□□ -1.63
VPS25-204ENST00000589577 SLC22A1O15245 554 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms