RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 BARHL1Q9BZE3 327 aa8.59□□□□□ -1.03
TOP3A-212ENST00000582122 OR6C3Q9NZP0 311 aa8.59□□□□□ -1.03
TOP3A-212ENST00000582122 DUX4Q9UBX2 424 aa8.59□□□□□ -1.03
TOP3A-212ENST00000582122 ST3GAL6Q9Y274 331 aa8.59□□□□□ -1.03
TOP3A-212ENST00000582122 UBE2J1Q9Y385 318 aaPredicted RBP8.59□□□□□ -1.03
TOP3A-212ENST00000582122 SF3B6Q9Y3B4 125 aaKnown RBP8.59□□□□□ -1.03
TOP3A-212ENST00000582122 LINC00312Q9Y6C7 94 aa8.59□□□□□ -1.03
TOP3A-212ENST00000582122 ANK2Q01484 3957 aa8.59□□□□□ -1.03
TOP3A-212ENST00000582122 TRGV10A0A0A0MS01 117 aa8.58□□□□□ -1.04
TOP3A-212ENST00000582122 TRAV40A0A0B4J280 105 aa8.58□□□□□ -1.04
TOP3A-212ENST00000582122 A0A0G2JK05 382 aa8.58□□□□□ -1.04
TOP3A-212ENST00000582122 TRDV1A0A1B0GX56 115 aa8.58□□□□□ -1.04
TOP3A-212ENST00000582122 FCN3O75636 299 aa8.58□□□□□ -1.04
TOP3A-212ENST00000582122 ZNF728P0DKX0 622 aa8.58□□□□□ -1.04
TOP3A-212ENST00000582122 CD37P11049 281 aa8.58□□□□□ -1.04
TOP3A-212ENST00000582122 SERPINA2P20848 420 aa8.58□□□□□ -1.04
TOP3A-212ENST00000582122 CEBPDP49716 269 aaPredicted RBP8.58□□□□□ -1.04
TOP3A-212ENST00000582122 P2RX3P56373 397 aa8.58□□□□□ -1.04
TOP3A-212ENST00000582122 RBM11P57052 281 aaKnown RBP8.58□□□□□ -1.04
TOP3A-212ENST00000582122 RBM39Q14498 530 aaKnown RBP8.58□□□□□ -1.04
TOP3A-212ENST00000582122 TIMM50Q3ZCQ8 353 aa8.58□□□□□ -1.04
TOP3A-212ENST00000582122 SLC22A6Q4U2R8 563 aa8.58□□□□□ -1.04
TOP3A-212ENST00000582122 C1orf100Q5SVJ3 147 aa8.58□□□□□ -1.04
TOP3A-212ENST00000582122 SYT6Q5T7P8 510 aaPredicted RBP8.58□□□□□ -1.04
TOP3A-212ENST00000582122 TMEM200BQ69YZ2 307 aa8.58□□□□□ -1.04
TOP3A-212ENST00000582122 GLIPR1L1Q6UWM5 242 aa8.58□□□□□ -1.04
TOP3A-212ENST00000582122 VMO1Q7Z5L0 202 aa8.58□□□□□ -1.04
TOP3A-212ENST00000582122 BATF2Q8N1L9 274 aa8.58□□□□□ -1.04
TOP3A-212ENST00000582122 ZNF565Q8N9K5 539 aa8.58□□□□□ -1.04
TOP3A-212ENST00000582122 OR6M1Q8NGM8 313 aa8.58□□□□□ -1.04
TOP3A-212ENST00000582122 KCNG3Q8TAE7 436 aa8.58□□□□□ -1.04
TOP3A-212ENST00000582122 MUL1Q969V5 352 aa8.58□□□□□ -1.04
TOP3A-212ENST00000582122 NR1H4Q96RI1 486 aaPredicted RBP8.58□□□□□ -1.04
TOP3A-212ENST00000582122 GAL3ST2Q9H3Q3 398 aa8.58□□□□□ -1.04
TOP3A-212ENST00000582122 RAB9BQ9NP90 201 aa8.58□□□□□ -1.04
TOP3A-212ENST00000582122 TAS2R3Q9NYW6 316 aa8.58□□□□□ -1.04
TOP3A-212ENST00000582122 IGHV1-69DA0A0B4J2H0 117 aa8.57□□□□□ -1.04
TOP3A-212ENST00000582122 TMEM82A0PJX8 343 aa8.57□□□□□ -1.04
TOP3A-212ENST00000582122 SIRPB1O00241 398 aa8.57□□□□□ -1.04
TOP3A-212ENST00000582122 SLC33A1O00400 549 aaPredicted RBP8.57□□□□□ -1.04
TOP3A-212ENST00000582122 PSPNO60542 156 aa8.57□□□□□ -1.04
TOP3A-212ENST00000582122 CA11O75493 328 aa8.57□□□□□ -1.04
TOP3A-212ENST00000582122 OR7C1O76099 320 aaPredicted RBP8.57□□□□□ -1.04
TOP3A-212ENST00000582122 CDRT1O95170 752 aa8.57□□□□□ -1.04
TOP3A-212ENST00000582122 IGHV1-69P01742 117 aa8.57□□□□□ -1.04
TOP3A-212ENST00000582122 CALRP27797 417 aaKnown RBP8.57□□□□□ -1.04
TOP3A-212ENST00000582122 HTR2CP28335 458 aa8.57□□□□□ -1.04
TOP3A-212ENST00000582122 DUSP1P28562 367 aa8.57□□□□□ -1.04
TOP3A-212ENST00000582122 FGF9P31371 208 aaPredicted RBP8.57□□□□□ -1.04
TOP3A-212ENST00000582122 OR3A1P47881 315 aa8.57□□□□□ -1.04
TOP3A-212ENST00000582122 UBE2E1P51965 193 aa8.57□□□□□ -1.04
TOP3A-212ENST00000582122 SNU13P55769 128 aaKnown RBP8.57□□□□□ -1.04
TOP3A-212ENST00000582122 RPS25P62851 125 aaKnown RBP8.57□□□□□ -1.04
TOP3A-212ENST00000582122 FABP5Q01469 135 aa8.57□□□□□ -1.04
TOP3A-212ENST00000582122 SCN1BQ07699 218 aa8.57□□□□□ -1.04
TOP3A-212ENST00000582122 MIDNQ504T8 468 aa8.57□□□□□ -1.04
TOP3A-212ENST00000582122 PAN3Q58A45 887 aaKnown RBP8.57□□□□□ -1.04
TOP3A-212ENST00000582122 KLF17Q5JT82 389 aaPredicted RBP8.57□□□□□ -1.04
TOP3A-212ENST00000582122 OR52W1Q6IF63 320 aa8.57□□□□□ -1.04
TOP3A-212ENST00000582122 Q6P435 159 aa8.57□□□□□ -1.04
TOP3A-212ENST00000582122 TMEM91Q6ZNR0 172 aa8.57□□□□□ -1.04
TOP3A-212ENST00000582122 LRRTM1Q86UE6 522 aa8.57□□□□□ -1.04
TOP3A-212ENST00000582122 TPRA1Q86W33 373 aa8.57□□□□□ -1.04
TOP3A-212ENST00000582122 LYPD6Q86Y78 171 aa8.57□□□□□ -1.04
TOP3A-212ENST00000582122 TSPAN14Q8NG11 270 aa8.57□□□□□ -1.04
TOP3A-212ENST00000582122 CORO2AQ92828 525 aa8.57□□□□□ -1.04
TOP3A-212ENST00000582122 ORAI1Q96D31 301 aa8.57□□□□□ -1.04
TOP3A-212ENST00000582122 ZNF714Q96N38 554 aa8.57□□□□□ -1.04
TOP3A-212ENST00000582122 TBX15Q96SF7 602 aa8.57□□□□□ -1.04
TOP3A-212ENST00000582122 ZNF696Q9H7X3 374 aa8.57□□□□□ -1.04
TOP3A-212ENST00000582122 PLGRKTQ9HBL7 147 aa8.57□□□□□ -1.04
TOP3A-212ENST00000582122 C19orf12Q9NSK7 152 aa8.57□□□□□ -1.04
TOP3A-212ENST00000582122 STUB1Q9UNE7 303 aa8.57□□□□□ -1.04
TOP3A-212ENST00000582122 SSR3Q9UNL2 185 aa8.57□□□□□ -1.04
TOP3A-212ENST00000582122 CENPVL3A0A0U1RRI6 287 aa8.56□□□□□ -1.04
TOP3A-212ENST00000582122 ODAMA1E959 279 aa8.56□□□□□ -1.04
TOP3A-212ENST00000582122 MAGEA13PA6NCF6 341 aa8.56□□□□□ -1.04
TOP3A-212ENST00000582122 C17orf98A8MV24 154 aa8.56□□□□□ -1.04
TOP3A-212ENST00000582122 TRIM77I1YAP6 450 aa8.56□□□□□ -1.04
TOP3A-212ENST00000582122 SLC17A2O00624 439 aa8.56□□□□□ -1.04
TOP3A-212ENST00000582122 SLC22A1O15245 554 aa8.56□□□□□ -1.04
TOP3A-212ENST00000582122 TMEM127O75204 238 aa8.56□□□□□ -1.04
TOP3A-212ENST00000582122 CRTAPO75718 401 aaPredicted RBP8.56□□□□□ -1.04
TOP3A-212ENST00000582122 MGMTP16455 207 aa8.56□□□□□ -1.04
TOP3A-212ENST00000582122 HILS1P60008 231 aa8.56□□□□□ -1.04
TOP3A-212ENST00000582122 EDDM3AQ14507 147 aa8.56□□□□□ -1.04
TOP3A-212ENST00000582122 SSX1Q16384 188 aa8.56□□□□□ -1.04
TOP3A-212ENST00000582122 TUSC1Q2TAM9 212 aa8.56□□□□□ -1.04
TOP3A-212ENST00000582122 KRBOX4Q5JUW0 171 aa8.56□□□□□ -1.04
TOP3A-212ENST00000582122 FAM27D1Q5T7N8 215 aa8.56□□□□□ -1.04
TOP3A-212ENST00000582122 GDPGP1Q6ZNW5 385 aa8.56□□□□□ -1.04
TOP3A-212ENST00000582122 OR2W3Q7Z3T1 314 aa8.56□□□□□ -1.04
TOP3A-212ENST00000582122 RNF144BQ7Z419 303 aa8.56□□□□□ -1.04
TOP3A-212ENST00000582122 TRAPPC6BQ86SZ2 158 aa8.56□□□□□ -1.04
TOP3A-212ENST00000582122 OR4S1Q8NGB4 309 aa8.56□□□□□ -1.04
TOP3A-212ENST00000582122 OR4M1Q8NGD0 313 aa8.56□□□□□ -1.04
TOP3A-212ENST00000582122 OR4D6Q8NGJ1 314 aa8.56□□□□□ -1.04
TOP3A-212ENST00000582122 OR13D1Q8NGV5 346 aa8.56□□□□□ -1.04
TOP3A-212ENST00000582122 OR10K1Q8NGX5 313 aa8.56□□□□□ -1.04
TOP3A-212ENST00000582122 LHX4Q969G2 390 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms