RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 FAM192AQ9GZU8 254 aa15.82■□□□□ 0.12
SREBF1-220ENST00000581707 TMEM138Q9NPI0 162 aa15.82■□□□□ 0.12
SREBF1-220ENST00000581707 TBL2Q9Y4P3 447 aaKnown RBP15.82■□□□□ 0.12
SREBF1-220ENST00000581707 SESN1Q9Y6P5 492 aa15.82■□□□□ 0.12
SREBF1-220ENST00000581707 TRGV10A0A0A0MS01 117 aa15.81■□□□□ 0.12
SREBF1-220ENST00000581707 TRBV5-5A0A0J9YX44 114 aa15.81■□□□□ 0.12
SREBF1-220ENST00000581707 ODF3BA8MYP8 253 aa15.81■□□□□ 0.12
SREBF1-220ENST00000581707 C21orf33P30042 268 aaPredicted RBP15.81■□□□□ 0.12
SREBF1-220ENST00000581707 GLIPR1P48060 266 aa15.81■□□□□ 0.12
SREBF1-220ENST00000581707 TAS2R43P59537 309 aa15.81■□□□□ 0.12
SREBF1-220ENST00000581707 DYNC1I2Q13409 638 aaKnown RBP15.81■□□□□ 0.12
SREBF1-220ENST00000581707 RSU1Q15404 277 aa15.81■□□□□ 0.12
SREBF1-220ENST00000581707 LY6EQ16553 131 aa15.81■□□□□ 0.12
SREBF1-220ENST00000581707 YIF1BQ5BJH7 314 aa15.81■□□□□ 0.12
SREBF1-220ENST00000581707 ZNF626Q68DY1 528 aa15.81■□□□□ 0.12
SREBF1-220ENST00000581707 ASCL4Q6XD76 172 aa15.81■□□□□ 0.12
SREBF1-220ENST00000581707 ZNF696Q9H7X3 374 aa15.81■□□□□ 0.12
SREBF1-220ENST00000581707 TSPAN9O75954 239 aa15.8■□□□□ 0.12
SREBF1-220ENST00000581707 CLPXO76031 633 aa15.8■□□□□ 0.12
SREBF1-220ENST00000581707 CSN2P05814 226 aa15.8■□□□□ 0.12
SREBF1-220ENST00000581707 BDKRB2P30411 391 aa15.8■□□□□ 0.12
SREBF1-220ENST00000581707 PTGFRP43088 359 aa15.8■□□□□ 0.12
SREBF1-220ENST00000581707 RPS11P62280 158 aaKnown RBP eCLIP15.8■□□□□ 0.12
SREBF1-220ENST00000581707 SRSF4Q08170 494 aaKnown RBP15.8■□□□□ 0.12
SREBF1-220ENST00000581707 Q499Y3 187 aa15.8■□□□□ 0.12
SREBF1-220ENST00000581707 PRR31Q5SQ13 230 aa15.8■□□□□ 0.12
SREBF1-220ENST00000581707 DDI2Q5TDH0 399 aa15.8■□□□□ 0.12
SREBF1-220ENST00000581707 OR51T1Q8NGJ9 327 aa15.8■□□□□ 0.12
SREBF1-220ENST00000581707 OR10K1Q8NGX5 313 aa15.8■□□□□ 0.12
SREBF1-220ENST00000581707 CORO2AQ92828 525 aa15.8■□□□□ 0.12
SREBF1-220ENST00000581707 FOXRED1Q96CU9 486 aaPredicted RBP15.8■□□□□ 0.12
SREBF1-220ENST00000581707 ORAI1Q96D31 301 aa15.8■□□□□ 0.12
SREBF1-220ENST00000581707 MALSU1Q96EH3 234 aa15.8■□□□□ 0.12
SREBF1-220ENST00000581707 PGLYRP3Q96LB9 341 aa15.8■□□□□ 0.12
SREBF1-220ENST00000581707 NKX3-1Q99801 234 aaPredicted RBP15.8■□□□□ 0.12
SREBF1-220ENST00000581707 TMEM133Q9H2Q1 129 aa15.8■□□□□ 0.12
SREBF1-220ENST00000581707 GAL3ST2Q9H3Q3 398 aa15.8■□□□□ 0.12
SREBF1-220ENST00000581707 C16orf95Q9H693 158 aa15.8■□□□□ 0.12
SREBF1-220ENST00000581707 PNMA8CA0A1B0GUJ8 204 aa15.79■□□□□ 0.12
SREBF1-220ENST00000581707 H0YJX3 145 aa15.79■□□□□ 0.12
SREBF1-220ENST00000581707 MYL12BO14950 172 aa15.79■□□□□ 0.12
SREBF1-220ENST00000581707 IGFBP3P17936 291 aaPredicted RBP15.79■□□□□ 0.12
SREBF1-220ENST00000581707 ZNF93P35789 620 aaPredicted RBP15.79■□□□□ 0.12
SREBF1-220ENST00000581707 OR3A4PP47883 348 aa15.79■□□□□ 0.12
SREBF1-220ENST00000581707 WNT4P56705 351 aa15.79■□□□□ 0.12
SREBF1-220ENST00000581707 KRBOX4Q5JUW0 171 aa15.79■□□□□ 0.12
SREBF1-220ENST00000581707 DYNAPQ8N1N2 210 aa15.79■□□□□ 0.12
SREBF1-220ENST00000581707 Q8NFD4 153 aa15.79■□□□□ 0.12
SREBF1-220ENST00000581707 PIFOQ8TCI5 191 aa15.79■□□□□ 0.12
SREBF1-220ENST00000581707 COQ2Q96H96 371 aa15.79■□□□□ 0.12
SREBF1-220ENST00000581707 CLEC7AQ9BXN2 247 aa15.79■□□□□ 0.12
SREBF1-220ENST00000581707 FKBP14Q9NWM8 211 aa15.79■□□□□ 0.12
SREBF1-220ENST00000581707 ING3Q9NXR8 418 aa15.79■□□□□ 0.12
SREBF1-220ENST00000581707 TAS2R3Q9NYW6 316 aa15.79■□□□□ 0.12
SREBF1-220ENST00000581707 CKLFQ9UBR5 152 aa15.79■□□□□ 0.12
SREBF1-220ENST00000581707 ING4Q9UNL4 249 aa15.79■□□□□ 0.12
SREBF1-220ENST00000581707 TRRAPQ9Y4A5 3859 aa15.78■□□□□ 0.12
SREBF1-220ENST00000581707 IGHV2-26A0A0B4J1V2 119 aa15.78■□□□□ 0.12
SREBF1-220ENST00000581707 ODAMA1E959 279 aa15.78■□□□□ 0.12
SREBF1-220ENST00000581707 VGLL3A8MV65 326 aa15.78■□□□□ 0.12
SREBF1-220ENST00000581707 MMP23AO75900 390 aa15.78■□□□□ 0.12
SREBF1-220ENST00000581707 CDRT1O95170 752 aa15.78■□□□□ 0.12
SREBF1-220ENST00000581707 HTR3BO95264 441 aa15.78■□□□□ 0.12
SREBF1-220ENST00000581707 PROK1P58294 105 aa15.78■□□□□ 0.12
SREBF1-220ENST00000581707 RIPK1Q13546 671 aa15.78■□□□□ 0.12
SREBF1-220ENST00000581707 IL13RA2Q14627 380 aa15.78■□□□□ 0.12
SREBF1-220ENST00000581707 ATXN7L3Q14CW9 347 aaPredicted RBP15.78■□□□□ 0.12
SREBF1-220ENST00000581707 FAM189A2Q15884 450 aa15.78■□□□□ 0.12
SREBF1-220ENST00000581707 SSX2Q16385 188 aa15.78■□□□□ 0.12
SREBF1-220ENST00000581707 PLA1AQ53H76 456 aa15.78■□□□□ 0.12
SREBF1-220ENST00000581707 LDLRAD2Q5SZI1 272 aa15.78■□□□□ 0.12
SREBF1-220ENST00000581707 SLC35E4Q6ICL7 350 aa15.78■□□□□ 0.12
SREBF1-220ENST00000581707 BRICD5Q6PL45 260 aa15.78■□□□□ 0.12
SREBF1-220ENST00000581707 NANOGP1Q8N7R0 232 aa15.78■□□□□ 0.12
SREBF1-220ENST00000581707 METTL9Q9H1A3 318 aa15.78■□□□□ 0.12
SREBF1-220ENST00000581707 TRAV24A0A0B4J272 114 aa15.77■□□□□ 0.12
SREBF1-220ENST00000581707 HSPB6O14558 160 aa15.77■□□□□ 0.12
SREBF1-220ENST00000581707 GPX5O75715 221 aa15.77■□□□□ 0.12
SREBF1-220ENST00000581707 CELP19835 753 aa15.77■□□□□ 0.12
SREBF1-220ENST00000581707 CDK2P24941 298 aa15.77■□□□□ 0.12
SREBF1-220ENST00000581707 GABPB1Q06547 395 aaPredicted RBP15.77■□□□□ 0.12
SREBF1-220ENST00000581707 PIGYQ3MUY2 71 aa15.77■□□□□ 0.12
SREBF1-220ENST00000581707 PAN3Q58A45 887 aaKnown RBP15.77■□□□□ 0.12
SREBF1-220ENST00000581707 C6orf141Q5SZD1 244 aa15.77■□□□□ 0.12
SREBF1-220ENST00000581707 MINOS1Q5TGZ0 78 aa15.77■□□□□ 0.12
SREBF1-220ENST00000581707 PRAMEF5Q5TYX0 476 aa15.77■□□□□ 0.12
SREBF1-220ENST00000581707 OR52W1Q6IF63 320 aa15.77■□□□□ 0.12
SREBF1-220ENST00000581707 HEPN1Q6WQI6 88 aa15.77■□□□□ 0.12
SREBF1-220ENST00000581707 NRG4Q8WWG1 115 aa15.77■□□□□ 0.12
SREBF1-220ENST00000581707 S100A13Q99584 98 aa15.77■□□□□ 0.12
SREBF1-220ENST00000581707 ZNF184Q99676 751 aaPredicted RBP15.77■□□□□ 0.12
SREBF1-220ENST00000581707 CITED1Q99966 193 aa15.77■□□□□ 0.12
SREBF1-220ENST00000581707 RAB18Q9NP72 206 aa15.77■□□□□ 0.12
SREBF1-220ENST00000581707 IL36GQ9NZH8 169 aa15.77■□□□□ 0.12
SREBF1-220ENST00000581707 ERGIC3Q9Y282 383 aa15.77■□□□□ 0.12
SREBF1-220ENST00000581707 MINOS1-NBL1R4GNA1 71 aa15.77■□□□□ 0.12
SREBF1-220ENST00000581707 TRAV8-7A0A075B6U6 113 aa15.76■□□□□ 0.11
SREBF1-220ENST00000581707 TRBV5-7A0A0A0MS05 114 aa15.76■□□□□ 0.11
SREBF1-220ENST00000581707 A0A1W2PPK0 400 aa15.76■□□□□ 0.11
SREBF1-220ENST00000581707 PTGES3LE9PB15 166 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms