RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 FAM90A15PP0C7V4 464 aa12.49□□□□□ -0.41
MKS1-210ENST00000581180 FAM90A13PP0C7W8 464 aa12.49□□□□□ -0.41
MKS1-210ENST00000581180 FAM90A14PP0C7W9 464 aa12.49□□□□□ -0.41
MKS1-210ENST00000581180 FAM90A24PP0C7X0 464 aa12.49□□□□□ -0.41
MKS1-210ENST00000581180 NDUFB7P17568 137 aa12.49□□□□□ -0.41
MKS1-210ENST00000581180 TMBIM6P55061 237 aa12.49□□□□□ -0.41
MKS1-210ENST00000581180 SCN1BQ07699 218 aa12.49□□□□□ -0.41
MKS1-210ENST00000581180 PLA2G7Q13093 441 aa12.49□□□□□ -0.41
MKS1-210ENST00000581180 CD276Q5ZPR3 534 aa12.49□□□□□ -0.41
MKS1-210ENST00000581180 SIGIRRQ6IA17 410 aa12.49□□□□□ -0.41
MKS1-210ENST00000581180 METAP1DQ6UB28 335 aaPredicted RBP12.49□□□□□ -0.41
MKS1-210ENST00000581180 GLCCI1Q86VQ1 547 aa12.49□□□□□ -0.41
MKS1-210ENST00000581180 LY6G5BQ8NDX9 201 aa12.49□□□□□ -0.41
MKS1-210ENST00000581180 RAB2BQ8WUD1 216 aa12.49□□□□□ -0.41
MKS1-210ENST00000581180 RAB40AQ8WXH6 277 aa12.49□□□□□ -0.41
MKS1-210ENST00000581180 BCL7BQ9BQE9 202 aa12.49□□□□□ -0.41
MKS1-210ENST00000581180 LPAR5Q9H1C0 372 aa12.49□□□□□ -0.41
MKS1-210ENST00000581180 LIN7BQ9HAP6 207 aa12.49□□□□□ -0.41
MKS1-210ENST00000581180 HIF1ANQ9NWT6 349 aa12.49□□□□□ -0.41
MKS1-210ENST00000581180 RCC2Q9P258 522 aaKnown RBP12.49□□□□□ -0.41
MKS1-210ENST00000581180 OR5V1Q9UGF6 321 aa12.49□□□□□ -0.41
MKS1-210ENST00000581180 DAPK2Q9UIK4 370 aa12.49□□□□□ -0.41
MKS1-210ENST00000581180 RPUSD1Q9UJJ7 312 aaKnown RBP12.49□□□□□ -0.41
MKS1-210ENST00000581180 CEPT1Q9Y6K0 416 aa12.49□□□□□ -0.41
MKS1-210ENST00000581180 MTORP42345 2549 aa12.48□□□□□ -0.41
MKS1-210ENST00000581180 A0A0A6YYD4 124 aa12.48□□□□□ -0.41
MKS1-210ENST00000581180 TMEM127O75204 238 aa12.48□□□□□ -0.41
MKS1-210ENST00000581180 OR7C1O76099 320 aaPredicted RBP12.48□□□□□ -0.41
MKS1-210ENST00000581180 CSN2P05814 226 aa12.48□□□□□ -0.41
MKS1-210ENST00000581180 GABRR1P24046 479 aa12.48□□□□□ -0.41
MKS1-210ENST00000581180 BLMHQ13867 455 aa12.48□□□□□ -0.41
MKS1-210ENST00000581180 CLEC9AQ6UXN8 241 aa12.48□□□□□ -0.41
MKS1-210ENST00000581180 CROCCP3Q8IVE0 287 aa12.48□□□□□ -0.41
MKS1-210ENST00000581180 OR5D13Q8NGL4 314 aa12.48□□□□□ -0.41
MKS1-210ENST00000581180 PPP1R35Q8TAP8 253 aa12.48□□□□□ -0.41
MKS1-210ENST00000581180 SLC25A46Q96AG3 418 aa12.48□□□□□ -0.41
MKS1-210ENST00000581180 NICN1Q9BSH3 213 aa12.48□□□□□ -0.41
MKS1-210ENST00000581180 CHST6Q9GZX3 395 aa12.48□□□□□ -0.41
MKS1-210ENST00000581180 PPA2Q9H2U2 334 aa12.48□□□□□ -0.41
MKS1-210ENST00000581180 INSIG2Q9Y5U4 225 aa12.48□□□□□ -0.41
MKS1-210ENST00000581180 KIR2DS1A0A191URI9 304 aa12.47□□□□□ -0.41
MKS1-210ENST00000581180 MGST3O14880 152 aa12.47□□□□□ -0.41
MKS1-210ENST00000581180 EFNB2P52799 333 aa12.47□□□□□ -0.41
MKS1-210ENST00000581180 PAX8Q06710 450 aa12.47□□□□□ -0.41
MKS1-210ENST00000581180 GRK1Q15835 563 aa12.47□□□□□ -0.41
MKS1-210ENST00000581180 PAN3Q58A45 887 aaKnown RBP12.47□□□□□ -0.41
MKS1-210ENST00000581180 USP43Q70EL4 1123 aa12.47□□□□□ -0.41
MKS1-210ENST00000581180 FAM89BQ8N5H3 189 aa12.47□□□□□ -0.41
MKS1-210ENST00000581180 SUMF2Q8NBJ7 301 aa12.47□□□□□ -0.41
MKS1-210ENST00000581180 NDNFQ8TB73 568 aa12.47□□□□□ -0.41
MKS1-210ENST00000581180 PTX4Q96A99 478 aa12.47□□□□□ -0.41
MKS1-210ENST00000581180 DMRTB1Q96MA1 342 aa12.47□□□□□ -0.41
MKS1-210ENST00000581180 NUDT16L1Q9BRJ7 211 aaKnown RBP12.47□□□□□ -0.41
MKS1-210ENST00000581180 DPCDQ9BVM2 203 aaPredicted RBP12.47□□□□□ -0.41
MKS1-210ENST00000581180 BARHL1Q9BZE3 327 aa12.47□□□□□ -0.41
MKS1-210ENST00000581180 RBM38Q9H0Z9 239 aaKnown RBP12.47□□□□□ -0.41
MKS1-210ENST00000581180 DCSTAMPQ9H295 470 aa12.47□□□□□ -0.41
MKS1-210ENST00000581180 C19orf12Q9NSK7 152 aa12.47□□□□□ -0.41
MKS1-210ENST00000581180 RAB22AQ9UL26 194 aa12.47□□□□□ -0.41
MKS1-210ENST00000581180 FN1P02751 2386 aaKnown RBP12.47□□□□□ -0.41
MKS1-210ENST00000581180 SVEP1Q4LDE5 3571 aa12.46□□□□□ -0.41
MKS1-210ENST00000581180 NAV3Q8IVL0 2385 aa12.46□□□□□ -0.41
MKS1-210ENST00000581180 TRBV23-1A0A0A0MS06 115 aa12.46□□□□□ -0.41
MKS1-210ENST00000581180 A0A0G2JMP0 313 aa12.46□□□□□ -0.41
MKS1-210ENST00000581180 A0A0X1KG70 313 aa12.46□□□□□ -0.41
MKS1-210ENST00000581180 FOXI3A8MTJ6 420 aaPredicted RBP12.46□□□□□ -0.41
MKS1-210ENST00000581180 ENSAO43768 121 aaKnown RBP12.46□□□□□ -0.41
MKS1-210ENST00000581180 PAHP00439 452 aa12.46□□□□□ -0.41
MKS1-210ENST00000581180 SNRPBP14678 240 aaKnown RBP12.46□□□□□ -0.41
MKS1-210ENST00000581180 RAB6AP20340 208 aa12.46□□□□□ -0.41
MKS1-210ENST00000581180 GATA3P23771 443 aa12.46□□□□□ -0.41
MKS1-210ENST00000581180 ERP29P30040 261 aaKnown RBP12.46□□□□□ -0.41
MKS1-210ENST00000581180 KCNJ3P48549 501 aa12.46□□□□□ -0.41
MKS1-210ENST00000581180 SCAND1P57086 179 aa12.46□□□□□ -0.41
MKS1-210ENST00000581180 PAX5Q02548 391 aa12.46□□□□□ -0.41
MKS1-210ENST00000581180 SPCS2Q15005 226 aa12.46□□□□□ -0.41
MKS1-210ENST00000581180 IDNKQ5T6J7 187 aa12.46□□□□□ -0.41
MKS1-210ENST00000581180 DCAF12L2Q5VW00 463 aa12.46□□□□□ -0.41
MKS1-210ENST00000581180 GDPD3Q7L5L3 318 aa12.46□□□□□ -0.41
MKS1-210ENST00000581180 OR4M2Q8NGB6 313 aa12.46□□□□□ -0.41
MKS1-210ENST00000581180 H1FXQ92522 213 aaKnown RBP12.46□□□□□ -0.41
MKS1-210ENST00000581180 ISOC1Q96CN7 298 aa12.46□□□□□ -0.41
MKS1-210ENST00000581180 COQ2Q96H96 371 aa12.46□□□□□ -0.41
MKS1-210ENST00000581180 CYYR1Q96J86 154 aa12.46□□□□□ -0.41
MKS1-210ENST00000581180 URM1Q9BTM9 101 aaKnown RBP12.46□□□□□ -0.41
MKS1-210ENST00000581180 MRI1Q9BV20 369 aa12.46□□□□□ -0.41
MKS1-210ENST00000581180 TMPRSS13Q9BYE2 586 aa12.46□□□□□ -0.41
MKS1-210ENST00000581180 SPACA1Q9HBV2 294 aa12.46□□□□□ -0.41
MKS1-210ENST00000581180 KCNS2Q9ULS6 477 aa12.46□□□□□ -0.41
MKS1-210ENST00000581180 H3BMQ9 156 aa12.45□□□□□ -0.42
MKS1-210ENST00000581180 HSPB6O14558 160 aa12.45□□□□□ -0.42
MKS1-210ENST00000581180 PDCD6O75340 191 aa12.45□□□□□ -0.42
MKS1-210ENST00000581180 GLAP06280 429 aa12.45□□□□□ -0.42
MKS1-210ENST00000581180 LIPFP07098 398 aa12.45□□□□□ -0.42
MKS1-210ENST00000581180 PPIAL4GP0DN37 164 aa12.45□□□□□ -0.42
MKS1-210ENST00000581180 FUT3P21217 361 aa12.45□□□□□ -0.42
MKS1-210ENST00000581180 CHATP28329 748 aa12.45□□□□□ -0.42
MKS1-210ENST00000581180 RPL31P62899 125 aaKnown RBP12.45□□□□□ -0.42
MKS1-210ENST00000581180 ATAD3CQ5T2N8 411 aa12.45□□□□□ -0.42
MKS1-210ENST00000581180 RAB12Q6IQ22 244 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms