RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 RBFOX1Q9NWB1 397 aaKnown RBP10.59□□□□□ -0.71
CSNK1D-213ENST00000580446 ETAA1Q9NY74 926 aa10.59□□□□□ -0.71
CSNK1D-213ENST00000580446 MYRFQ9Y2G1 1151 aa10.59□□□□□ -0.71
CSNK1D-213ENST00000580446 KLHDC2Q9Y2U9 406 aa10.59□□□□□ -0.71
CSNK1D-213ENST00000580446 SELENOKQ9Y6D0 94 aa10.59□□□□□ -0.71
CSNK1D-213ENST00000580446 A3GALT2U3KPV4 340 aa10.59□□□□□ -0.71
CSNK1D-213ENST00000580446 GSC2O15499 205 aa10.58□□□□□ -0.72
CSNK1D-213ENST00000580446 PSMA6P60900 246 aaKnown RBP10.58□□□□□ -0.72
CSNK1D-213ENST00000580446 ZNF91Q05481 1191 aa10.58□□□□□ -0.72
CSNK1D-213ENST00000580446 MFGE8Q08431 387 aaPredicted RBP10.58□□□□□ -0.72
CSNK1D-213ENST00000580446 IFI44LQ53G44 452 aa10.58□□□□□ -0.72
CSNK1D-213ENST00000580446 SLX4IPQ5VYV7 408 aa10.58□□□□□ -0.72
CSNK1D-213ENST00000580446 FKBP9P1Q75LS8 142 aa10.58□□□□□ -0.72
CSNK1D-213ENST00000580446 OR10X1Q8NGY0 326 aa10.58□□□□□ -0.72
CSNK1D-213ENST00000580446 MS4A10Q96PG2 267 aa10.58□□□□□ -0.72
CSNK1D-213ENST00000580446 PPIL3Q9H2H8 161 aaKnown RBP10.58□□□□□ -0.72
CSNK1D-213ENST00000580446 CCDC134Q9H6E4 229 aa10.58□□□□□ -0.72
CSNK1D-213ENST00000580446 SCRT2Q9NQ03 307 aa10.58□□□□□ -0.72
CSNK1D-213ENST00000580446 TAS2R3Q9NYW6 316 aa10.58□□□□□ -0.72
CSNK1D-213ENST00000580446 ENPP5Q9UJA9 477 aa10.58□□□□□ -0.72
CSNK1D-213ENST00000580446 APOBP04114 4563 aaKnown RBP10.57□□□□□ -0.72
CSNK1D-213ENST00000580446 A0A1W2PN81 502 aa10.57□□□□□ -0.72
CSNK1D-213ENST00000580446 ODAMA1E959 279 aa10.57□□□□□ -0.72
CSNK1D-213ENST00000580446 FAM90A10PA6NDY2 464 aa10.57□□□□□ -0.72
CSNK1D-213ENST00000580446 OR11H12B2RN74 326 aa10.57□□□□□ -0.72
CSNK1D-213ENST00000580446 FXYD1O00168 92 aa10.57□□□□□ -0.72
CSNK1D-213ENST00000580446 DLGAP1O14490 977 aa10.57□□□□□ -0.72
CSNK1D-213ENST00000580446 RGS16O15492 202 aaPredicted RBP10.57□□□□□ -0.72
CSNK1D-213ENST00000580446 BLVRBP30043 206 aaPredicted RBP10.57□□□□□ -0.72
CSNK1D-213ENST00000580446 CHRNA7P36544 502 aa10.57□□□□□ -0.72
CSNK1D-213ENST00000580446 NPBWR2P48146 333 aa10.57□□□□□ -0.72
CSNK1D-213ENST00000580446 LCN12Q6JVE5 192 aa10.57□□□□□ -0.72
CSNK1D-213ENST00000580446 IZUMO1Q8IYV9 350 aa10.57□□□□□ -0.72
CSNK1D-213ENST00000580446 Q8N1X5 172 aa10.57□□□□□ -0.72
CSNK1D-213ENST00000580446 THEM6Q8WUY1 208 aa10.57□□□□□ -0.72
CSNK1D-213ENST00000580446 CORO2AQ92828 525 aa10.57□□□□□ -0.72
CSNK1D-213ENST00000580446 FLYWCH2Q96CP2 140 aaKnown RBP10.57□□□□□ -0.72
CSNK1D-213ENST00000580446 INTS14Q96SY0 518 aa10.57□□□□□ -0.72
CSNK1D-213ENST00000580446 TEAD3Q99594 435 aa10.57□□□□□ -0.72
CSNK1D-213ENST00000580446 ROPN1BQ9BZX4 212 aaPredicted RBP10.57□□□□□ -0.72
CSNK1D-213ENST00000580446 ROPN1Q9HAT0 212 aaPredicted RBP10.57□□□□□ -0.72
CSNK1D-213ENST00000580446 IGKV1-27A0A075B6S5 117 aa10.56□□□□□ -0.72
CSNK1D-213ENST00000580446 A0A1W2PRQ8 180 aa10.56□□□□□ -0.72
CSNK1D-213ENST00000580446 MOSP00540 346 aa10.56□□□□□ -0.72
CSNK1D-213ENST00000580446 ERP29P30040 261 aaKnown RBP10.56□□□□□ -0.72
CSNK1D-213ENST00000580446 GLP1RP43220 463 aa10.56□□□□□ -0.72
CSNK1D-213ENST00000580446 SYNJ2BPP57105 145 aa10.56□□□□□ -0.72
CSNK1D-213ENST00000580446 IL24Q13007 206 aa10.56□□□□□ -0.72
CSNK1D-213ENST00000580446 DYRK1AQ13627 763 aa10.56□□□□□ -0.72
CSNK1D-213ENST00000580446 DGCR6Q14129 220 aa10.56□□□□□ -0.72
CSNK1D-213ENST00000580446 ATXN7L3Q14CW9 347 aaPredicted RBP10.56□□□□□ -0.72
CSNK1D-213ENST00000580446 LINC01590Q5TEZ4 76 aa10.56□□□□□ -0.72
CSNK1D-213ENST00000580446 ERICH5Q6P6B1 374 aa10.56□□□□□ -0.72
CSNK1D-213ENST00000580446 SLC25A26Q70HW3 274 aa10.56□□□□□ -0.72
CSNK1D-213ENST00000580446 KRT74Q7RTS7 529 aa10.56□□□□□ -0.72
CSNK1D-213ENST00000580446 CYP4Z1Q86W10 505 aa10.56□□□□□ -0.72
CSNK1D-213ENST00000580446 RFESDQ8TAC1 157 aa10.56□□□□□ -0.72
CSNK1D-213ENST00000580446 COQ2Q96H96 371 aa10.56□□□□□ -0.72
CSNK1D-213ENST00000580446 ANKRD19PQ9H560 264 aa10.56□□□□□ -0.72
CSNK1D-213ENST00000580446 ZCCHC4Q9H5U6 513 aa10.56□□□□□ -0.72
CSNK1D-213ENST00000580446 SSU72Q9NP77 194 aaKnown RBP10.56□□□□□ -0.72
CSNK1D-213ENST00000580446 ENPP4Q9Y6X5 453 aa10.56□□□□□ -0.72
CSNK1D-213ENST00000580446 ANKRD34BA5PLL1 514 aa10.55□□□□□ -0.72
CSNK1D-213ENST00000580446 IDH3BO43837 385 aa10.55□□□□□ -0.72
CSNK1D-213ENST00000580446 SELENOFO60613 162 aa10.55□□□□□ -0.72
CSNK1D-213ENST00000580446 CSN3P07498 182 aa10.55□□□□□ -0.72
CSNK1D-213ENST00000580446 BCL3P20749 454 aa10.55□□□□□ -0.72
CSNK1D-213ENST00000580446 NANOS2P60321 138 aaKnown RBP10.55□□□□□ -0.72
CSNK1D-213ENST00000580446 NDPQ00604 133 aa10.55□□□□□ -0.72
CSNK1D-213ENST00000580446 ZNF45Q02386 682 aa10.55□□□□□ -0.72
CSNK1D-213ENST00000580446 TMEM179BQ7Z7N9 219 aa10.55□□□□□ -0.72
CSNK1D-213ENST00000580446 Q8N402 240 aa10.55□□□□□ -0.72
CSNK1D-213ENST00000580446 OR8D4Q8NGM9 314 aa10.55□□□□□ -0.72
CSNK1D-213ENST00000580446 OR9G4Q8NGQ1 327 aa10.55□□□□□ -0.72
CSNK1D-213ENST00000580446 FBXL17Q9UF56 701 aa10.55□□□□□ -0.72
CSNK1D-213ENST00000580446 CD300AQ9UGN4 299 aa10.55□□□□□ -0.72
CSNK1D-213ENST00000580446 COPS3Q9UNS2 423 aa10.55□□□□□ -0.72
CSNK1D-213ENST00000580446 SRRM2Q9UQ35 2752 aaKnown RBP10.55□□□□□ -0.72
CSNK1D-213ENST00000580446 TRAV39A0A0B4J263 110 aa10.54□□□□□ -0.72
CSNK1D-213ENST00000580446 MSGN1A6NI15 193 aa10.54□□□□□ -0.72
CSNK1D-213ENST00000580446 FAM220BPB1ANY3 271 aa10.54□□□□□ -0.72
CSNK1D-213ENST00000580446 PRKACAP17612 351 aa10.54□□□□□ -0.72
CSNK1D-213ENST00000580446 SCN1BQ07699 218 aa10.54□□□□□ -0.72
CSNK1D-213ENST00000580446 BNIP1Q12981 228 aa10.54□□□□□ -0.72
CSNK1D-213ENST00000580446 GALEQ14376 348 aa10.54□□□□□ -0.72
CSNK1D-213ENST00000580446 KRBOX4Q5JUW0 171 aa10.54□□□□□ -0.72
CSNK1D-213ENST00000580446 CLVS2Q5SYC1 327 aa10.54□□□□□ -0.72
CSNK1D-213ENST00000580446 MINDY2Q8NBR6 621 aa10.54□□□□□ -0.72
CSNK1D-213ENST00000580446 TMEM104Q8NE00 496 aa10.54□□□□□ -0.72
CSNK1D-213ENST00000580446 OR2T12Q8NG77 320 aa10.54□□□□□ -0.72
CSNK1D-213ENST00000580446 HAVCR2Q8TDQ0 301 aa10.54□□□□□ -0.72
CSNK1D-213ENST00000580446 UTP4Q969X6 686 aaKnown RBP10.54□□□□□ -0.72
CSNK1D-213ENST00000580446 OTULINQ96BN8 352 aa10.54□□□□□ -0.72
CSNK1D-213ENST00000580446 RITA1Q96K30 269 aa10.54□□□□□ -0.72
CSNK1D-213ENST00000580446 LRGUKQ96M69 825 aa10.54□□□□□ -0.72
CSNK1D-213ENST00000580446 FUZQ9BT04 418 aa10.54□□□□□ -0.72
CSNK1D-213ENST00000580446 TTTY10Q9BZA0 68 aa10.54□□□□□ -0.72
CSNK1D-213ENST00000580446 NMNAT2Q9BZQ4 307 aa10.54□□□□□ -0.72
CSNK1D-213ENST00000580446 PKIBQ9C010 78 aa10.54□□□□□ -0.72
CSNK1D-213ENST00000580446 SLC25A19Q9HC21 320 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms