RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 SIRT7Q9NRC8 400 aa13.08□□□□□ -0.32
VAPA-204ENST00000577901 BLOC1S6Q9UL45 172 aa13.08□□□□□ -0.32
VAPA-204ENST00000577901 FAM96BQ9Y3D0 163 aa13.08□□□□□ -0.32
VAPA-204ENST00000577901 GABRPO00591 440 aa13.07□□□□□ -0.32
VAPA-204ENST00000577901 IGFBP3P17936 291 aaPredicted RBP13.07□□□□□ -0.32
VAPA-204ENST00000577901 MAPK3P27361 379 aaPredicted RBP13.07□□□□□ -0.32
VAPA-204ENST00000577901 TGFBR2P37173 567 aa13.07□□□□□ -0.32
VAPA-204ENST00000577901 EDDM3BP56851 147 aa13.07□□□□□ -0.32
VAPA-204ENST00000577901 RSU1Q15404 277 aa13.07□□□□□ -0.32
VAPA-204ENST00000577901 GRK1Q15835 563 aa13.07□□□□□ -0.32
VAPA-204ENST00000577901 DDI2Q5TDH0 399 aa13.07□□□□□ -0.32
VAPA-204ENST00000577901 Q6ZSV7 163 aa13.07□□□□□ -0.32
VAPA-204ENST00000577901 MS4A15Q8N5U1 240 aa13.07□□□□□ -0.32
VAPA-204ENST00000577901 SGCDQ92629 289 aa13.07□□□□□ -0.32
VAPA-204ENST00000577901 C16orf95Q9H693 158 aa13.07□□□□□ -0.32
VAPA-204ENST00000577901 IL36RNQ9UBH0 155 aa13.07□□□□□ -0.32
VAPA-204ENST00000577901 FOXJ3Q9UPW0 622 aa13.07□□□□□ -0.32
VAPA-204ENST00000577901 TRBV5-7A0A0A0MS05 114 aa13.06□□□□□ -0.32
VAPA-204ENST00000577901 A0A1W2PPK0 400 aa13.06□□□□□ -0.32
VAPA-204ENST00000577901 TMEM82A0PJX8 343 aa13.06□□□□□ -0.32
VAPA-204ENST00000577901 DEGS1O15121 323 aa13.06□□□□□ -0.32
VAPA-204ENST00000577901 PTGFRP43088 359 aa13.06□□□□□ -0.32
VAPA-204ENST00000577901 MEF2CQ06413 473 aaPredicted RBP13.06□□□□□ -0.32
VAPA-204ENST00000577901 SCN1BQ07699 218 aa13.06□□□□□ -0.32
VAPA-204ENST00000577901 GPR50Q13585 617 aa13.06□□□□□ -0.32
VAPA-204ENST00000577901 IRF3Q14653 427 aa13.06□□□□□ -0.32
VAPA-204ENST00000577901 ELP2Q6IA86 826 aa13.06□□□□□ -0.32
VAPA-204ENST00000577901 PRSS48Q7RTY5 328 aa13.06□□□□□ -0.32
VAPA-204ENST00000577901 FAM110DQ8TAY7 271 aaPredicted RBP13.06□□□□□ -0.32
VAPA-204ENST00000577901 ORAI1Q96D31 301 aa13.06□□□□□ -0.32
VAPA-204ENST00000577901 OR5M11Q96RB7 305 aa13.06□□□□□ -0.32
VAPA-204ENST00000577901 ZNF184Q99676 751 aaPredicted RBP13.06□□□□□ -0.32
VAPA-204ENST00000577901 PCDHB16Q9NRJ7 776 aa13.06□□□□□ -0.32
VAPA-204ENST00000577901 ING4Q9UNL4 249 aa13.06□□□□□ -0.32
VAPA-204ENST00000577901 LSM2Q9Y333 95 aaKnown RBP13.06□□□□□ -0.32
VAPA-204ENST00000577901 hADV38S2A0JD32 116 aa13.05□□□□□ -0.32
VAPA-204ENST00000577901 RNASEK-C17orf49H0YIS7 233 aa13.05□□□□□ -0.32
VAPA-204ENST00000577901 SIRPB1O00241 398 aa13.05□□□□□ -0.32
VAPA-204ENST00000577901 MGST3O14880 152 aa13.05□□□□□ -0.32
VAPA-204ENST00000577901 PSPNO60542 156 aa13.05□□□□□ -0.32
VAPA-204ENST00000577901 OR2H2O95918 312 aa13.05□□□□□ -0.32
VAPA-204ENST00000577901 FBP1P09467 338 aa13.05□□□□□ -0.32
VAPA-204ENST00000577901 ZNF44P15621 663 aa13.05□□□□□ -0.32
VAPA-204ENST00000577901 FSTP19883 344 aa13.05□□□□□ -0.32
VAPA-204ENST00000577901 LMO1P25800 156 aa13.05□□□□□ -0.32
VAPA-204ENST00000577901 UBE2E1P51965 193 aa13.05□□□□□ -0.32
VAPA-204ENST00000577901 DOC2BQ14184 412 aa13.05□□□□□ -0.32
VAPA-204ENST00000577901 EDDM3AQ14507 147 aa13.05□□□□□ -0.32
VAPA-204ENST00000577901 DHRS7BQ6IAN0 325 aaPredicted RBP13.05□□□□□ -0.32
VAPA-204ENST00000577901 ASCL4Q6XD76 172 aa13.05□□□□□ -0.32
VAPA-204ENST00000577901 CHST4Q8NCG5 386 aa13.05□□□□□ -0.32
VAPA-204ENST00000577901 UFD1Q92890 307 aa13.05□□□□□ -0.32
VAPA-204ENST00000577901 DERL3Q96Q80 235 aa13.05□□□□□ -0.32
VAPA-204ENST00000577901 CHST6Q9GZX3 395 aa13.05□□□□□ -0.32
VAPA-204ENST00000577901 METTL9Q9H1A3 318 aa13.05□□□□□ -0.32
VAPA-204ENST00000577901 VPREB3Q9UKI3 123 aa13.05□□□□□ -0.32
VAPA-204ENST00000577901 SF3B6Q9Y3B4 125 aaKnown RBP13.05□□□□□ -0.32
VAPA-204ENST00000577901 RRP15Q9Y3B9 282 aaKnown RBP13.05□□□□□ -0.32
VAPA-204ENST00000577901 TRAV8-7A0A075B6U6 113 aa13.04□□□□□ -0.32
VAPA-204ENST00000577901 FUOMA2VDF0 154 aa13.04□□□□□ -0.32
VAPA-204ENST00000577901 BTBD17A6NE02 478 aa13.04□□□□□ -0.32
VAPA-204ENST00000577901 ZNF780AO75290 641 aaPredicted RBP13.04□□□□□ -0.32
VAPA-204ENST00000577901 HTR3BO95264 441 aa13.04□□□□□ -0.32
VAPA-204ENST00000577901 CSTBP04080 98 aaKnown RBP13.04□□□□□ -0.32
VAPA-204ENST00000577901 HSMCR30P0CW71 290 aa13.04□□□□□ -0.32
VAPA-204ENST00000577901 OR3A4PP47883 348 aa13.04□□□□□ -0.32
VAPA-204ENST00000577901 C2orf68Q2NKX9 166 aa13.04□□□□□ -0.32
VAPA-204ENST00000577901 ACSM3Q53FZ2 586 aa13.04□□□□□ -0.32
VAPA-204ENST00000577901 CDH26Q8IXH8 852 aa13.04□□□□□ -0.32
VAPA-204ENST00000577901 OR4S1Q8NGB4 309 aa13.04□□□□□ -0.32
VAPA-204ENST00000577901 TNFRSF14Q92956 283 aa13.04□□□□□ -0.32
VAPA-204ENST00000577901 NR1H4Q96RI1 486 aaPredicted RBP13.04□□□□□ -0.32
VAPA-204ENST00000577901 TMED9Q9BVK6 235 aa13.04□□□□□ -0.32
VAPA-204ENST00000577901 HEXA-AS1Q9H8Q6 139 aa13.04□□□□□ -0.32
VAPA-204ENST00000577901 ISYNA1Q9NPH2 558 aa13.04□□□□□ -0.32
VAPA-204ENST00000577901 ZNRD1Q9P1U0 126 aa13.04□□□□□ -0.32
VAPA-204ENST00000577901 WNK1Q9H4A3 2382 aa13.04□□□□□ -0.32
VAPA-204ENST00000577901 MEGF11A6BM72 1044 aa13.03□□□□□ -0.32
VAPA-204ENST00000577901 NPFFO15130 113 aa13.03□□□□□ -0.32
VAPA-204ENST00000577901 DENRO43583 198 aaKnown RBP13.03□□□□□ -0.32
VAPA-204ENST00000577901 TSPAN9O75954 239 aa13.03□□□□□ -0.32
VAPA-204ENST00000577901 CDRT1O95170 752 aa13.03□□□□□ -0.32
VAPA-204ENST00000577901 MAS1P04201 325 aa13.03□□□□□ -0.32
VAPA-204ENST00000577901 ZNF728P0DKX0 622 aa13.03□□□□□ -0.32
VAPA-204ENST00000577901 CCL3L1P16619 93 aa13.03□□□□□ -0.32
VAPA-204ENST00000577901 ERP29P30040 261 aaKnown RBP13.03□□□□□ -0.32
VAPA-204ENST00000577901 OR3A1P47881 315 aa13.03□□□□□ -0.32
VAPA-204ENST00000577901 DLX1P56177 255 aa13.03□□□□□ -0.32
VAPA-204ENST00000577901 ERVFRD-1P60508 538 aa13.03□□□□□ -0.32
VAPA-204ENST00000577901 PRB3Q04118 309 aaPredicted RBP13.03□□□□□ -0.32
VAPA-204ENST00000577901 GPR176Q14439 515 aa13.03□□□□□ -0.32
VAPA-204ENST00000577901 ZNF273Q14593 569 aa13.03□□□□□ -0.32
VAPA-204ENST00000577901 IL13RA2Q14627 380 aa13.03□□□□□ -0.32
VAPA-204ENST00000577901 Q6P435 159 aa13.03□□□□□ -0.32
VAPA-204ENST00000577901 JAGN1Q8N5M9 183 aa13.03□□□□□ -0.32
VAPA-204ENST00000577901 Q8NFD4 153 aa13.03□□□□□ -0.32
VAPA-204ENST00000577901 OR51T1Q8NGJ9 327 aa13.03□□□□□ -0.32
VAPA-204ENST00000577901 ZNF714Q96N38 554 aa13.03□□□□□ -0.32
VAPA-204ENST00000577901 IL36GQ9NZH8 169 aa13.03□□□□□ -0.32
VAPA-204ENST00000577901 A0A1W2PRD5 423 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms