RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 OR1Q1Q15612 314 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 NEDD8Q15843 81 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 GABRA6Q16445 453 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 MAPK14Q16539 360 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 ZNF181Q2M3W8 571 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 LINC01620Q4KN68 170 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 TMEM128Q5BJH2 165 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 MESTQ5EB52 335 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 GPRC6AQ5T6X5 926 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 CPTPQ5TA50 214 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 LIPKQ5VXJ0 399 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 FAM131AQ6UXB0 335 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 WDR82Q6UXN9 313 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 Q6ZSR3 168 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 ZNF621Q6ZSS3 439 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 TMPPEQ6ZT21 453 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 LINC00336Q6ZUF6 198 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 FAM183BPQ6ZVS7 135 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 ASCL5Q7RTU5 278 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 H2BFWTQ7Z2G1 175 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 SLC35E3Q7Z769 313 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 BLIDQ8IZY5 108 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 TMEM61Q8N0U2 210 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 OR4D9Q8NGE8 314 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 OR51G2Q8NGK0 314 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 OR10G9Q8NGN4 311 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 OR5J2Q8NH18 312 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 OR10A6Q8NH74 314 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 RXFP4Q8TDU9 374 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 SPRYD4Q8WW59 207 aaPredicted RBP2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 BAALCQ8WXS3 180 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 TMEM37Q8WXS4 190 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 OR5P2Q8WZ92 322 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 RORBQ92753 470 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 RDH5Q92781 318 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 RERGQ96A58 199 aaPredicted RBP2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 APOBEC3DQ96AK3 386 aaPredicted RBP2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 RPUSD4Q96CM3 377 aaKnown RBP2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 SEH1LQ96EE3 360 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 PYURFQ96I23 114 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 OR5B12Q96R08 314 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 MBOAT4Q96T53 435 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 SLC6A7Q99884 636 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 NUDT9Q9BW91 350 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 RAB34Q9BZG1 259 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 NKX6-2Q9C056 277 aaPredicted RBP2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 CST9LQ9H4G1 147 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 DHX35Q9H5Z1 703 aaKnown RBP2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 METTL17Q9H7H0 456 aaPredicted RBP2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 EFCAB1Q9HAE3 211 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 POLE4Q9NR33 117 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 FBXL12Q9NXK8 326 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 CLN8Q9UBY8 286 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 HSPB11Q9Y547 144 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 AP4S1Q9Y587 144 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 V9GYY9 64 aa2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 PCF11O94913 1555 aaKnown RBP2.43□□□□□ -2.02
SMCHD1-202ENST00000577300 KDM6AO15550 1401 aaPredicted RBP2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 PLCH2O75038 1416 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 TMEM131LA2VDJ0 1609 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 KIF1BO60333 1816 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 ADGRL2O95490 1459 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 NCOA2Q15596 1464 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 CCDC18Q5T9S5 1454 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 SHANK2Q9UPX8 1470 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 IGLV4-69A0A075B6H9 119 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 IGKV1D-17A0A075B6S4 117 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 TRAV30A0A087WSZ9 112 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 A0A1B0GTI1 187 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 PSMB11A5LHX3 300 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 NKX2-6A6NCS4 301 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 TVP23AA6NH52 213 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 COLCA2A8K830 154 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 HIDE1A8MVS5 230 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 G3V4G9 280 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 K7ERU9 68 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 AIPO00170 330 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 CORTO00230 105 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 MANBAO00462 879 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 PRKAB2O43741 272 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 MPZL2O60487 215 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 TPST1O60507 370 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 STK16O75716 305 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 UPK1BO75841 260 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 MPC2O95563 127 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 HLA-HP01893 362 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 IFNW1P05000 195 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 ISG15P05161 165 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 SERPINA7P05543 415 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 KLK1P06870 262 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 RHOCP08134 193 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 OR13C7P0DN81 318 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 CD79AP11912 226 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 UGT2B7P16662 529 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 RCC1P18754 421 aaPredicted RBP2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 PVALBP20472 110 aaPredicted RBP2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 FGF7P21781 194 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 NBL1P41271 181 aa2.42□□□□□ -2.02
SMCHD1-202ENST00000577300 GLP1RP43220 463 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms